Basic Information

Insect: Anticlea derivata
Gene Symbol: -
Assembly: GCA_947579855.1
Location: OX388285.1:1896822-1903688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 1.6 79 4.1 0.1 2 23 46 68 45 68 0.95

2 37 0.51 25 5.7 0.3 3 23 92 113 91 113 0.94

3 37 0.0014 0.069 13.8 0.4 1 23 118 141 118 141 0.90

4 37 7.3e-05 0.0036 17.8 2.1 1 23 145 168 145 168 0.92

5 37 0.0055 0.28 11.9 0.8 1 23 173 196 173 196 0.98

6 37 0.99 50 4.8 4.0 1 23 202 225 202 225 0.96

7 37 0.12 5.9 7.7 2.2 2 23 232 253 231 253 0.97

8 37 0.88 44 4.9 0.3 1 23 297 319 297 319 0.94

9 37 0.022 1.1 10.0 0.2 3 23 347 368 345 368 0.92

10 37 0.0045 0.22 12.2 0.3 2 23 389 411 388 411 0.94

11 37 0.0011 0.057 14.0 5.9 1 23 416 438 416 439 0.96

12 37 0.87 43 5.0 3.5 1 23 443 466 443 466 0.96

13 37 0.3 15 6.4 2.5 2 23 469 491 468 491 0.96

14 37 0.18 8.9 7.1 1.7 2 20 498 516 498 518 0.92

15 37 0.0042 0.21 12.2 4.8 1 23 566 589 566 589 0.96

16 37 9.6 4.8e+02 1.7 0.1 2 23 618 640 617 640 0.83

17 37 0.2 10 7.0 0.5 1 23 661 684 661 684 0.93

18 37 4.6e-05 0.0023 18.4 0.8 1 23 689 712 689 712 0.95

19 37 0.00013 0.0063 17.0 0.3 1 23 717 740 717 740 0.96

20 37 0.014 0.73 10.6 1.8 2 23 746 768 745 768 0.95

21 37 0.00085 0.043 14.4 3.2 1 23 772 795 772 795 0.97

22 37 0.015 0.76 10.5 0.7 2 23 802 823 801 823 0.97

23 37 0.00028 0.014 16.0 1.2 1 23 829 851 829 851 0.96

24 37 2.4 1.2e+02 3.6 2.3 1 23 892 914 892 914 0.96

25 37 5.5 2.8e+02 2.4 0.1 3 23 943 964 941 964 0.83

26 37 0.079 3.9 8.2 0.4 2 23 985 1007 984 1007 0.95

27 37 0.61 31 5.4 12.0 1 23 1012 1035 1012 1035 0.97

28 37 0.00018 0.009 16.5 1.7 1 23 1040 1063 1040 1063 0.93

29 37 0.068 3.4 8.4 3.1 2 23 1066 1088 1065 1088 0.93

30 37 0.15 7.6 7.3 2.5 1 23 1171 1194 1171 1194 0.98

31 37 0.0052 0.26 12.0 0.5 2 23 1269 1291 1268 1291 0.95

32 37 3.1e-05 0.0016 19.0 0.3 3 23 1298 1319 1296 1319 0.95

33 37 0.00073 0.037 14.6 3.8 2 23 1324 1346 1323 1346 0.95

34 37 0.077 3.8 8.3 0.2 1 23 1351 1374 1351 1374 0.97

35 37 0.0039 0.19 12.4 6.2 1 23 1378 1401 1378 1401 0.97

36 37 0.021 1 10.1 0.6 2 23 1408 1429 1407 1429 0.96

37 37 6.4e-06 0.00032 21.1 1.3 1 23 1435 1457 1435 1457 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	1.6	79	4.1	0.1	2	23	46	68	45	68	0.95
2	37	0.51	25	5.7	0.3	3	23	92	113	91	113	0.94
3	37	0.0014	0.069	13.8	0.4	1	23	118	141	118	141	0.90
4	37	7.3e-05	0.0036	17.8	2.1	1	23	145	168	145	168	0.92
5	37	0.0055	0.28	11.9	0.8	1	23	173	196	173	196	0.98
6	37	0.99	50	4.8	4.0	1	23	202	225	202	225	0.96
7	37	0.12	5.9	7.7	2.2	2	23	232	253	231	253	0.97
8	37	0.88	44	4.9	0.3	1	23	297	319	297	319	0.94
9	37	0.022	1.1	10.0	0.2	3	23	347	368	345	368	0.92
10	37	0.0045	0.22	12.2	0.3	2	23	389	411	388	411	0.94
11	37	0.0011	0.057	14.0	5.9	1	23	416	438	416	439	0.96
12	37	0.87	43	5.0	3.5	1	23	443	466	443	466	0.96
13	37	0.3	15	6.4	2.5	2	23	469	491	468	491	0.96
14	37	0.18	8.9	7.1	1.7	2	20	498	516	498	518	0.92
15	37	0.0042	0.21	12.2	4.8	1	23	566	589	566	589	0.96
16	37	9.6	4.8e+02	1.7	0.1	2	23	618	640	617	640	0.83
17	37	0.2	10	7.0	0.5	1	23	661	684	661	684	0.93
18	37	4.6e-05	0.0023	18.4	0.8	1	23	689	712	689	712	0.95
19	37	0.00013	0.0063	17.0	0.3	1	23	717	740	717	740	0.96
20	37	0.014	0.73	10.6	1.8	2	23	746	768	745	768	0.95
21	37	0.00085	0.043	14.4	3.2	1	23	772	795	772	795	0.97
22	37	0.015	0.76	10.5	0.7	2	23	802	823	801	823	0.97
23	37	0.00028	0.014	16.0	1.2	1	23	829	851	829	851	0.96
24	37	2.4	1.2e+02	3.6	2.3	1	23	892	914	892	914	0.96
25	37	5.5	2.8e+02	2.4	0.1	3	23	943	964	941	964	0.83
26	37	0.079	3.9	8.2	0.4	2	23	985	1007	984	1007	0.95
27	37	0.61	31	5.4	12.0	1	23	1012	1035	1012	1035	0.97
28	37	0.00018	0.009	16.5	1.7	1	23	1040	1063	1040	1063	0.93
29	37	0.068	3.4	8.4	3.1	2	23	1066	1088	1065	1088	0.93
30	37	0.15	7.6	7.3	2.5	1	23	1171	1194	1171	1194	0.98
31	37	0.0052	0.26	12.0	0.5	2	23	1269	1291	1268	1291	0.95
32	37	3.1e-05	0.0016	19.0	0.3	3	23	1298	1319	1296	1319	0.95
33	37	0.00073	0.037	14.6	3.8	2	23	1324	1346	1323	1346	0.95
34	37	0.077	3.8	8.3	0.2	1	23	1351	1374	1351	1374	0.97
35	37	0.0039	0.19	12.4	6.2	1	23	1378	1401	1378	1401	0.97
36	37	0.021	1	10.1	0.6	2	23	1408	1429	1407	1429	0.96
37	37	6.4e-06	0.00032	21.1	1.3	1	23	1435	1457	1435	1457	0.99

Sequence Information

Coding Sequence: ATGTATGAAACATGTGATCTCTTGCAAATACATTACGAAAACGAACATAAAACGCTGAACTTAGACCCAAATGATGATATTCTGAAGAGATACAGGCGCGGTCAGACTTTCATGCGATTTAACATAGTGAATCTAAAATGTAAACTATGTCTGCAACCGTTCGATGATCTCGATCCAATGGTCGATCATCTAACAACAACTCACAAACTGCAATATGATAAATCATTCGGCGATGTCATAGAACCATTTAAGCTAACTAGTAATAATAACGCGTGTCACATTTGCGGGGCGGATTTCGCCTTCTTCAAAATACTCGTGAAACATATCCGTGACAATCACGTGCCTCACAAGTTTGTTTGCGATCTGTGCGGAAAGAGATTCGTGAGAAACGCTGCATACTTGATGCATAAATATTACGCGCACGGTCCAGGCTTCACGTGCAAGGATTGCGGCAAAGTGTTCTGCAGTAACATGAAGCTGAAAGACCACGCTGTGAGAGAACATGAGGGTCCTAAATACAGGTGTTCTGAATGCCAGAGCGAGTTTCCCACTATTTACCAAAGAAAAAAGCACATGATAACCGCTCACGGTGATGAGTCCTCATTTCCGTGCACTCAATGCGAGAAGGTCTTCATCTGTGCGTCGTACAGGCACTACCATATCAGGAAGGTGCATTTGAAGGAACGAAACGTTAAGTGCACCATCTGCCAAGAAGAATTGTTCGATCGTCACCGCTTAAAAATTCATATGACGAAGCATTTGAAGCAGAGGAACCATGTCTATGACAAAGCTGAAGGAAAGCAATTCACTGCCAATGAAAGCAGGAGGAAGAACCTCCAAACCTTGGTCAACAATACCACGGTGATACCTTTCAAATGGCGCGGCAAATACTTGTGCTATTTCTGCGGAATCGATATAGTAGAATACAAAGACTTAAAAGAGCACACGAAAACACACGTTCCCTGCTCGACTGCCGATCGAGCAATGCAACTTATAAAATGCGGGAACGAAACCAAGCTAGACGTGTCAGAAACAAATTGCAACGTTTGCTTTGAAAAGTTTTCTAATATCGCCGATTTGATATCACATCTGATAGAGAAACATAAGCTTTGGTACCACGAGGACGTGTCTCTAACTCTTATGACATATCGGCTGGTCGATTTGAGATGTTTGCTATGCGACGAGAGTTTCAAAGTATTCATTAATCTTATACGGCATGTAAACAACAGCCACCCCAAAAATTGCTTTCAATGTGATATCTGCAGTCAAAAGTACAACAAAAAACGTGATTTATCACATCACATCAGATCTCATCACAAGAAAGATTATAGTTGTCCCAAGTGCTCCCTGACGTTTTTCTGCTTTGCTGATCTAATGAAGCATAAAATGAAGGAGCATTTGTCGAGATGCAATCTTTGCTTACAAACATTTTCATCGTATCAGAAACGATTGAGTCACATGAAAAAGGAGCACGAATTAGACCGCGGGGGAGAGTGTGGATTTTGTAATAAACAGTTTTATACTAAACACAGTTTTTTGGATCATGCAACTAAATGCAATATTTCTCCGCCGAAAGACGAAGAGGCAGTTGTCGTTGAATATGATAGTAGCAAAAATGTCAGAGATCTCAGAATCGGTATTGCCTATATCATCAACATGACCAGCGCTATGCCTTTCAAGTTCTTCCACAACAAATTCAGGTGCTTCTACTGTCCAAAAGACTTCAATTCTTGCAATGATCTCAAGCAGCATACGACAAAAGAACATCCTATATGCGAGGCTACGTTTCACGCGCTGAAAATGCGAGGGAGATCAGAAGGCATGAAGATCAAAGTCGATATATCGTCTCTCTATTGCAAAATATGCTTTGTTAAATTCGACGACTTCATCGCAGCGATCGGTCATTTAAAAAGTGAACACAGAGCTGTCATAAATAAATGTGTCCATTTGTTCACACCTTATCACTTGGTACAGGATAAGTTCGCCTGTTCGTTCTGCAGCGAGCAGTTCCGTTATTTCGTCCTGCTCTTGCAACATGTGAATGCAAGTCATTCAGTCAACCAGTACGTTTGCACTTACTGCGGTAAGGCTTTCCCATCGTATCCAAATCTGCGCGGACATATCTCTCATTACCATTCGAGCGGTAGGTTCAAATGCACAGTTTGCAATCAAGGTTATTCTACCAACGACGGCCTTAAGCTCCACATGGGCAAGGCACACGGCAGTAAGATTATCAGCTGCAAGCAATGCCCGGAGATGTTCATCTCCCGTTATCATAAGTCGAGGCACGTTATGAAAGAGCACGGCGGCGGCCATAAATGCTCGTACTGCGGCATATCTTTTATTAAGTACTCGTTTATGACCAACCACGTTAGGCGATTGCATTTGAAAGAGAAGAACGTTCAGTGTACTCTTTGTTCCGAACGGTTCTTCGACGCGACTCGCCTGAAGATGCATATGGTGAGGCATGTGGGCGAGCGCTCGTTTCGGTGCGATTATTGCGGAAAGAGGTTTCTGCGGAAGAAGAACCTTAGAGGTCATGTGGCTCTTCACCTTAAGAACGGCAATGAAACGCCCGCCCCGATCGAAAGAAACACGTCCGAGCGACGGAGGGAAAACATGAAAACTATATTCGATAACACGACAATTCTTCCGTTCAGGTGGCGAGGAACGTACATCTGTTTCTATTGTAACACTCATATTGACGATTATATAGGGTTCAGAAAGCACACTAAGGCTCACGGCAAGTGCGCCACCCAGAGAACTGCTATGAAAAAATTGAAGGGGAGCAGGGTAGCCGTAAATTTTGACGTGTCGGAAATCGCGTGCGAACTTTGCGAGCAGCACTTCAAAAGCTTGGAAGTTATTGTAGAGCATTTGATAAACGAACACAACCTGTTCTACGACAAGGATGTTTATAGTGAAATCTTAGAATACAGGTTGAACGATTTACGCTGCACGCAATGTGACCTACAGTTTGAAACTTTCAAGGCTTTAGCTGGTCACGTGAACAAGTTTCATTCGCTGAGCAGTTATATATGCCATCATTGCGGATGCAAGTTTCATAAAAAGAGACATATCATGGAGCACATGAACAGGCTCCACCGATTAGTGGGTTACATTTGCCAGCAATGCGGTGTAGAATTCAAAAGTCGTTCCGAATTGCGGAAGCACACAGCGCACACGCACCAGACGCGATGCCACGTTTGCGGCAAGAAATTCCTTTATTTTAAAAAGCTTTTCAAACACATTGAGCTGGAACATCCAGACGATAACAAATCATGCGGTTATTGTATGGAAGAGTTCCATTCTGCGCTCGTTCTGACACAGCATTTGATGAAATGCAAAGCGCGGTTGCTCTCGCTAGAGGAGACTGACAATGCTACGAACTCCGAGAGGAAAGACTCGGTGAACACATCGAGAACGCACGAGGAGATCGTGCGTATACGACAAAACATACAGTGCGTCCTGAACATGTCCACAGCGATCCCCTTCAGGTTCCGAGTCAAATTCACCTGCTTCCACTGCGCTCTGAAGTACGATGATTACGAAGTGCTGAAACAGCACACGCGAACCGAACACCCGGTGTGCGACATCAAAAGCAAATCTATGAAAAAGTGCAAAGGTAAACGCACATTCGTCAGGGTCGATATCGCGAATCTCTCTTGTAAACTGTGCTCGGCCCCCATGCCCGACTTGGAGCACTTCATCGATCACGCAATCACCGCTCACGATGCTGACTACGACAAATCCGTCAATATAGAAACATGCTTTGAGCCTTATCGCCTACTCAAAGGCAACATTCAGTGCTTAGAGTGTCCCAAGGTGTTCAGATACCTTAACACTATGCTTAGGCACTTCAACTCGGAGCACAGCAATAACAACGTGATCTGCGACTACTGCGGCCGCGGCTTCCGCAGCGCGAACAACCTAAAGATGCACTTACAGAACACCCACACTGGTTCCTGCGAGTGCAAGATCTGCCACGCGAAATTCAAGAACCAATCAGTTCTTGTGCGGCACATGGCGAAAACCCACAACGAGAAGACCTTCAAATGCGCCAACTGCGCAGAGATGTTCGAGTCCGCGTACCAGAGGCAGATCCACCTGATCAAAGTCCACGGGATCGGCCACAAGTGCGAGTACTGCGGGAAGATGTTCACGAAGCACTCGTTCATGGACTCGCACGTGAGGCGGACGCATTTGAAGGAGAAAAACGTCACGTGCTCCGTTTGCAACGACAAGTTCTTCGATAATTACTTGCTGAGAATGCACATGGTTAAGCATGACGGCGAAAGGAAGTTCAAGTGCGAATTGTGCGGGAAAGCTTTTTTGAGGCAGAAGAACTTGCGGACTCACATGGACACTCACAAGAAATACGGCTTTGTACAGTGA
Protein Sequence: MYETCDLLQIHYENEHKTLNLDPNDDILKRYRRGQTFMRFNIVNLKCKLCLQPFDDLDPMVDHLTTTHKLQYDKSFGDVIEPFKLTSNNNACHICGADFAFFKILVKHIRDNHVPHKFVCDLCGKRFVRNAAYLMHKYYAHGPGFTCKDCGKVFCSNMKLKDHAVREHEGPKYRCSECQSEFPTIYQRKKHMITAHGDESSFPCTQCEKVFICASYRHYHIRKVHLKERNVKCTICQEELFDRHRLKIHMTKHLKQRNHVYDKAEGKQFTANESRRKNLQTLVNNTTVIPFKWRGKYLCYFCGIDIVEYKDLKEHTKTHVPCSTADRAMQLIKCGNETKLDVSETNCNVCFEKFSNIADLISHLIEKHKLWYHEDVSLTLMTYRLVDLRCLLCDESFKVFINLIRHVNNSHPKNCFQCDICSQKYNKKRDLSHHIRSHHKKDYSCPKCSLTFFCFADLMKHKMKEHLSRCNLCLQTFSSYQKRLSHMKKEHELDRGGECGFCNKQFYTKHSFLDHATKCNISPPKDEEAVVVEYDSSKNVRDLRIGIAYIINMTSAMPFKFFHNKFRCFYCPKDFNSCNDLKQHTTKEHPICEATFHALKMRGRSEGMKIKVDISSLYCKICFVKFDDFIAAIGHLKSEHRAVINKCVHLFTPYHLVQDKFACSFCSEQFRYFVLLLQHVNASHSVNQYVCTYCGKAFPSYPNLRGHISHYHSSGRFKCTVCNQGYSTNDGLKLHMGKAHGSKIISCKQCPEMFISRYHKSRHVMKEHGGGHKCSYCGISFIKYSFMTNHVRRLHLKEKNVQCTLCSERFFDATRLKMHMVRHVGERSFRCDYCGKRFLRKKNLRGHVALHLKNGNETPAPIERNTSERRRENMKTIFDNTTILPFRWRGTYICFYCNTHIDDYIGFRKHTKAHGKCATQRTAMKKLKGSRVAVNFDVSEIACELCEQHFKSLEVIVEHLINEHNLFYDKDVYSEILEYRLNDLRCTQCDLQFETFKALAGHVNKFHSLSSYICHHCGCKFHKKRHIMEHMNRLHRLVGYICQQCGVEFKSRSELRKHTAHTHQTRCHVCGKKFLYFKKLFKHIELEHPDDNKSCGYCMEEFHSALVLTQHLMKCKARLLSLEETDNATNSERKDSVNTSRTHEEIVRIRQNIQCVLNMSTAIPFRFRVKFTCFHCALKYDDYEVLKQHTRTEHPVCDIKSKSMKKCKGKRTFVRVDIANLSCKLCSAPMPDLEHFIDHAITAHDADYDKSVNIETCFEPYRLLKGNIQCLECPKVFRYLNTMLRHFNSEHSNNNVICDYCGRGFRSANNLKMHLQNTHTGSCECKICHAKFKNQSVLVRHMAKTHNEKTFKCANCAEMFESAYQRQIHLIKVHGIGHKCEYCGKMFTKHSFMDSHVRRTHLKEKNVTCSVCNDKFFDNYLLRMHMVKHDGERKFKCELCGKAFLRQKNLRTHMDTHKKYGFVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -