Ader004767.1
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- Zbtb41
- Assembly
- GCA_947579855.1
- Location
- OX388286.1:5943967-5950827[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.074 3.7 8.3 3.7 3 23 166 186 164 186 0.97 2 18 3.8e-05 0.0019 18.7 0.3 2 23 212 233 211 233 0.96 3 18 0.00038 0.019 15.5 1.3 1 23 239 261 239 262 0.95 4 18 0.0038 0.19 12.4 0.4 1 21 268 288 268 289 0.93 5 18 0.0033 0.17 12.6 1.2 1 23 300 322 300 322 0.97 6 18 8e-06 0.0004 20.8 2.1 1 23 328 351 328 351 0.96 7 18 7e-06 0.00035 21.0 2.5 3 23 359 379 357 379 0.98 8 18 0.00017 0.0086 16.6 2.1 1 23 385 407 385 407 0.96 9 18 7.1e-05 0.0035 17.8 3.2 1 23 417 439 417 439 0.97 10 18 8.3e-07 4.1e-05 23.9 2.1 1 23 445 467 445 467 0.98 11 18 1.5e-05 0.00073 20.0 5.2 2 23 477 499 476 499 0.96 12 18 5.9e-06 0.00029 21.2 5.9 1 23 513 535 513 535 0.98 13 18 2.8e-07 1.4e-05 25.4 1.8 1 23 541 563 541 563 0.98 14 18 0.00056 0.028 15.0 5.8 1 23 569 591 569 591 0.97 15 18 9.4e-05 0.0047 17.4 0.8 1 23 597 620 597 620 0.97 16 18 2.5e-05 0.0012 19.3 1.7 1 23 626 648 626 648 0.97 17 18 7.4e-06 0.00037 20.9 0.4 1 23 654 676 654 676 0.98 18 18 0.0089 0.45 11.2 0.6 1 20 682 701 682 703 0.93
Sequence Information
- Coding Sequence
- ATGCCTAGTCCTGTATGCCGTGTGTGCCTGCAGGGCGGAGTGCGGATGGCAGGAATTGCAGACATGCAGCTCCTGCAGCTATATGAGAAACTGACCAGCGCTAAGCTTCACGCAGGAGATGGCAGGCCGAGTGTGCTGTGCTACATCTGTTCCTCTCAGCTGCGGAGATGCGGCAGGTTCTCCGACATGGCGCACACATCTGATAAGCTCCTCAGACATATATTACAGAATGATATGAAGGTGTCACTCGAGACTGTTTCTTCGCATAACATGGGAATCATGCAAAGCTTATCTTTTACCGCGCTACCATCCACAACATTTGATGGCTATACAATAGATGCCAGCACTCGAATGATGTACGAAGTAGCCGTTAAACAAGAAGTTATCTTAGGAGATACTCCTAAAATAGAGAGAAGCTTAACGACAGAAGATGCGAACCTACACAATAGCATTAAAACAGAACACATTGTCAATACAGATCTATCTTATAACTGTTGTCACATGTGCCAAAATACATCTATGTCGGAAGAGGAGTTGACAGCCCATCTGAGAACCCACACGAATGCAGACCAAGTGGCTAATAATAAGCACAATACAAGCAGTGAAAACAAAATCCATGTTCAACAAGATGTCCGCTGTAAAGAGTGCAATAAAGTCTTCTCCGAGCCCAAAGCCCTGAAGCAGCACGAGAGCATCCACACCGGCGCCAGGCCCTTCGTCTGCGATCTGTGCAGTCAGGCCTTCCGACTCAAGCAGAGCCTACAAAACCACATCACAGTCCACCACAGTGGAGAGAAGAATTTCGTTTGCGATGTATGCAATAAATCCTTCTTTCTTAAGAGAGGATTGATCTCACACAAGCAGTCTCCGAAGTGCCGCAGTGCCTCGTACAAGCCGTACGCCTGCAAGACTTGCGACTCTGCCTTCGCGGACGTGCATTCTCTGAAACAGCACAAACTCTCGCACGTCGGGGAGAGGCGGTTCGCCTGCAGCAGATGCGATAAAGCATTCACTGTCAGGAGCTACTTGACAAAACACATCAGGCACGTGCACTTCGCTGAGAAGTCGTTCGGCTGCCACATGTGCACTAAGAAATTCAAAAAACCAAGTGCCCTAACACTTCATATGAGAATCCACACGAACGATAAGCTGTTTGCTTGCCAGCTGTGCGGTGAGAGGTTCCAGCACAAAAACTCCTTGCAGAGACATGCATTACGTCACACGTCCGGCGGCGAGTCGAGCGTAGAGTACTGCTGCTACGTTTGCAGCAAAAAGTTCCGGTTGAAAGCCAGTTTAAAGGCGCACATGCGAGCTCACTCCGAAGAGAAACCGTTTAGTTGTGAGACGTGCGGGAAAAAGTTTGGCCACAAGGGAAACTTGCAATTACACATGAAAATACACGTCGGAGCACCCGCCGTGACGTCGCTAACCTGCCGCATATGCGACAAGACGTTCCAGCATAACTCATCGCTAAAGAGACACACGCGACGACGTCACACGCCAGCCGGTGCACTCACGCACCCGGACGACTGGCGGTACTGCTGCGACAGGTGCAGTAAGAAGTTCAAGTCAAAATCCAGTTTAAAGGCACACCTGAGGACTCACACCGGCGAGCAGCCGTTTAGCTGCGACACCTGCGGGAAGAAATTCAACCAGCGGGGGAACCTGCGCCTGCACATGAACAGGCACTTCGGGGAGAAGACGTACGCGTGCGAAGTGTGCGGGAAAACGTTCTTCCACAACTGTCATTTGAAAATTCACTCCCAAATTCATTCGGAGGTGAAGCCGTTCGCTTGCAACAAGTGTGAGCGGACGTTTTCTTTCATAAACGCTTTAAAAGAGCACATTCGTAGACTACACACTGAAGTGAAGGCGTTCGCCTGCAACAAGTGTGGGAAATCCTTCGAGCAGGAGTGCAGTCTCGCGAGCCACGCGCGACGTCACGCGGCGGAGAGAGTGTACTCGTGTGATAGATGCAGCAAAAGTTACACGACAGCTGAACTATTGAAGCGGCACATCGCGATCCACAGCGACGAGACGCCGTACGCCTGCGACAAGTGCAGTAAAACGTTCAAAATAATGAGATACTTACAGCAGCACACGGCGCGGTGCCGCGCGCGCGCCGCCCACGCAGCTGCGGTGGAGTCGCAGACAAATATTTAG
- Protein Sequence
- MPSPVCRVCLQGGVRMAGIADMQLLQLYEKLTSAKLHAGDGRPSVLCYICSSQLRRCGRFSDMAHTSDKLLRHILQNDMKVSLETVSSHNMGIMQSLSFTALPSTTFDGYTIDASTRMMYEVAVKQEVILGDTPKIERSLTTEDANLHNSIKTEHIVNTDLSYNCCHMCQNTSMSEEELTAHLRTHTNADQVANNKHNTSSENKIHVQQDVRCKECNKVFSEPKALKQHESIHTGARPFVCDLCSQAFRLKQSLQNHITVHHSGEKNFVCDVCNKSFFLKRGLISHKQSPKCRSASYKPYACKTCDSAFADVHSLKQHKLSHVGERRFACSRCDKAFTVRSYLTKHIRHVHFAEKSFGCHMCTKKFKKPSALTLHMRIHTNDKLFACQLCGERFQHKNSLQRHALRHTSGGESSVEYCCYVCSKKFRLKASLKAHMRAHSEEKPFSCETCGKKFGHKGNLQLHMKIHVGAPAVTSLTCRICDKTFQHNSSLKRHTRRRHTPAGALTHPDDWRYCCDRCSKKFKSKSSLKAHLRTHTGEQPFSCDTCGKKFNQRGNLRLHMNRHFGEKTYACEVCGKTFFHNCHLKIHSQIHSEVKPFACNKCERTFSFINALKEHIRRLHTEVKAFACNKCGKSFEQECSLASHARRHAAERVYSCDRCSKSYTTAELLKRHIAIHSDETPYACDKCSKTFKIMRYLQQHTARCRARAAHAAAVESQTNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -