Basic Information

Insect: Anticlea derivata
Gene Symbol: SMARCC2
Assembly: GCA_947579855.1
Location: OX388277.1:4917227-4934560[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-14 1e-11 44.8 0.1 3 44 526 567 524 569 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-14	1e-11	44.8	0.1	3	44	526	567	524	569	0.95

Sequence Information

Coding Sequence: ATGAAAGTGTTCATGGATATGAAACCGGGCGGTTCGCTCTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCGTCCCGCAAGGACTTGAACGTGCAAATGATGCTTGAGATAGAGTCGTCGCTGCTCGGCGCGGAGCTGATTCGCACGCCGTGCGTGTACATCCGCCCTGAGGTGGACAAGGCGACCGCTAACAAGGTGAAGGACATCGTCAGCAACCATCAGGGAGAGATCTGCGAGGACGAAGAGGATGCTACTCACATCGTTTACCCGACCGTGGATCCGCTGGAGGAGGAGTATGCTCGCCCCGTGTTCCGCAGGGGTAACCACGTGCTTGTCCACTGGTACTACCTGCCCGACAGCCATGACACATGGGCGCAAGCCGAGATGCCGGTGGATGTGCCAGAGACAGCCAGTTGGGACTGCAACCGGGCGGAGCCTTGGCGCGTCACCGCCACCTGGGTGCTGGACCTGCCACTTTACAACGAGTGGATGAACGAGGAAGACTATGAAGTCGACAGCAATGGCAAGAAAAAGGTGCACAAACTGCGGTTGTCTGTTGATGACCTGATCCCCGGCGCGGAGACTTCAAGCAAGAGCAAGAAGGGAAGCAAAAGGAAGCGGTCTCCTTCCCCGCCGCCGCAGAAAAACAAGAGGAAAAGCCGCGTATCAAAGCGTCGCGACGAAGCAGAAGACGAAGATGACAACGCTTCCCGCGACAACAGTGACGTCACGCCGGCGGCGCCCGAGCCCGCGGAGAAGCCGGCCGAACCACCAGCAGCGCCCGCTCCCGAGCCAGCCCCGGCGCCAGCGCCGACGTCGGCGCCCGAGGCGCCGTCCACGCCGGCCCCTCAGATGGACACACATGATGATTCCCAGGGGAAGCATAGCGATTCTAACACACAGGAAACTCTAACAAAAGAAGAGTTAGAAGACAACGTGACAGACCAGACGCATCACATAGTGGTACCGTCTTACTCGGCTTGGTTCGACTACAACTCTATCCATACGATTGAGAAGCGAGCGCTGCCTGAATTCTTCAACGGCAAAAACAAATCGAAGACTCCTGAGATATATCTCGCTTACAGAAACTTCATGATTGATACTTACCGGCTGAACCCCACGGAGTACTTAACAAGCACTGCCAGTCGACGCAACCTGGCGGGTGACGTCTGCGCTATCATGCGAGTGCACGGCTTTCTGGAGCAGTGGGGACTTATCAACTACCAGCTGGAAGCGGAGTCCCGGCCGACGGCGATGGGCCCGCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCCTCCGGCCTGCAGCCGCTGACGGCGCGCCCCGCTCAGCCGTCGCAACCTCGCGCAGCGGAAAACGTACCAAAAGTGGAGCCGGGTCTACCGAACGGCGCAGACTCTGGAGTAGTACCGCCGCTAGCCGTCAACGCGCCGCCGCAAGTGAAGGCAGAACCCGTGATTGAGTTCGGAGCCAACCCGGGACTCAAACTTGATCAGTACCGCGGCGGGTCTCGCGGCCGCGAATGGACGGAGCAGGAGACGCTGCTGCTGCTGGAAGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCGGCGCACGTCGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGGCTGCCCATCGAGGAGCCCTACCTCAACGATCCTGCTTCAGGTGGGGTGCTGGGCCCGCTGGCGTACCAGCCGATACCGTTCAGCAAGACGGGCAACCCCGTGATGAGCACCGTCGCCTTCCTCGCGTCCGTGGTGGACCCGCGCATCGCCTCCAAAGCCACGCGCGCTGCTATGGACGAATTCGCTGCTATAAAGGACGAGGTGCCGGCCGCTATGATGGAGGCGCACGTGAAGGCTGCGAGCGCCCACGGCCCGGCCGCCGCCCTGCAAGCCACCGGCATCGCCGGCACCGCGCCCGAACCTACAGGCGAGAAGAAAGAAGGTGCCAGCGACGTTAAGGGGGAACCTATGGAGGTAGAGGAAAGCGACGTGAAGGTGAAAGATGAGCCGACCGAAGCTCCGGCGCCCGCCGCGCCCCCCGCCGCTGATGAGAAGGACCCCAAGGAGGAACGGACGTCACCACCACCAGCGGAAGGCGGAAGCGGCACAGTGGACGCCAAACTGCAATCAGCCGCCGCCGCTGCGCTTGCCGCCGCCGCCGTGAAGGCCAAACACCTCGCCGGCGTCGAGGAACGCAAGATCAAGTCTCTGGTAGCACTCCTAGTCGAGACACAGATGAAGAAACTGGAGATCAAACTAAGGCACTTTGAGGAACTTGAAGCTACTATGGAAAGGGAACGAGAGGGTCTGGAGTACCAGCGTCAACAGCTGATCCAAGAGCGACAACAGTTCCACCTGGAGCAGCTGAAGGCGGCCGAGTTCCGCGCCAGGCATCAAGCGCACCAACGGATGCAAGCGGAAGGCGGCGCCGCGGCGGTGGCGCCCGAGCAGCCGGCGCCGGACGCCGCGCCTCCCGTCGCGCCCCCGACGCACGCGTAA
Protein Sequence: MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMLEIESSLLGAELIRTPCVYIRPEVDKATANKVKDIVSNHQGEICEDEEDATHIVYPTVDPLEEEYARPVFRRGNHVLVHWYYLPDSHDTWAQAEMPVDVPETASWDCNRAEPWRVTATWVLDLPLYNEWMNEEDYEVDSNGKKKVHKLRLSVDDLIPGAETSSKSKKGSKRKRSPSPPPQKNKRKSRVSKRRDEAEDEDDNASRDNSDVTPAAPEPAEKPAEPPAAPAPEPAPAPAPTSAPEAPSTPAPQMDTHDDSQGKHSDSNTQETLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLTARPAQPSQPRAAENVPKVEPGLPNGADSGVVPPLAVNAPPQVKAEPVIEFGANPGLKLDQYRGGSRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLNDPASGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAASAHGPAAALQATGIAGTAPEPTGEKKEGASDVKGEPMEVEESDVKVKDEPTEAPAPAAPPAADEKDPKEERTSPPPAEGGSGTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRMQAEGGAAAVAPEQPAPDAAPPVAPPTHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737434;
90% Identity: iTF_00662179; iTF_00856579; iTF_00377059; iTF_00909668; iTF_00638598; iTF_00686299; iTF_00632712; iTF_01429000; iTF_01335888; iTF_01219729; iTF_01528242; iTF_01170549; iTF_00663031; iTF_01171419; iTF_01529144; iTF_00737434; iTF_00267136;
80% Identity: -