Ader017766.1
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- -
- Assembly
- GCA_947579855.1
- Location
- OX388285.1:2058928-2065185[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 2.1e-05 24.2 0.2 3 43 226 267 224 269 0.89
Sequence Information
- Coding Sequence
- ATGGCAGTAGAAAAACTAGAAATAGAGACATACTTCGGTAAATGCAAATGTTGCCTCAATTATGGTTATCTGAGGACCATGTGGGAGAAGCATGTTGTCGAAGAAGAGACAGAAATCTACGGGCAGATGCTCACGCAATGTTTCAATATCGAGTGGACTAGACAGGGCTCCGAGGAGAACGACCAGATCTGCGAGGACTGCATATGGAAGCTACGAGAAGCCTACTTGTTCAAGAAACAGGTTCAGCGGTGCCAGAAAGAAATACAACAGTGTGAGAGTGAAGATTATGAAATAAAATCTGACCCAGATAATGAGAACTATGATGTAGAATATTTGGAGGAAGATATTTTGGACCACCCTAACAGCAATGACGGTTCTGATGAAGACAGCTGCAAGGAGAGTCTTAATCTTGGAGAGAGTCACGATGAGAACCATAGTCAAGATGATGATGATGGTACAATTTTAAAGGAGGATGATGATGATGAAGATTATGATGAAAACCAGGATCCTGAGGATGCAGATGACACCGATTTCGAACCCGACAGCCGTCGCAAGCGCAAACCACAGGAAAAACACAAGGACGATGCAGACAGCGAAACAGACGCTCCCAAACCAAAATGGCCGAAGAGGCTGCCCAAAGACGAACGGAGCAAGACCTACAAGCAGTACTCTATGGATGCGCTGAAGGGTGCAGTGGAGGCTGTGACCGCCCGGAGGATGAACCAGAAGCAAGCGGCCAAGCACTACCAGGTGCCCAGGAAGACATTGAGTGCGAAAGTTCGGGAGGTTAAAAATGAAGCGGGAACCGCTGAAAGACCGCTGACCCCGCAGTCGATAAGCGACGAGGAATCTCTCGAAAAACAAGACAATGAAACCGCCATGTTGGTTATAAAGAAGCACAGAGAGAACATTAACTCAGTCCTGGCTTACTCCAACGCGACCCCCATCCGCGGCTACTGGGGCGTTGGCTACGTCTGCGCTTTCTGCCCCGACCAGTTCACAACAGCTGCTGCCCTCAAAACCCACACCCACACCCACGGGAACATATCCAAGCTGTACACGGTCGCGCATGTCAGAACTCACGTGACCAGGCTCGATGTCACCGGCCTGAAATGCCGCATATGCAGCACTAAGATCGAAGACTTGGCCACTTTGATGTCGCATTTGAAGGAACACGACAAACCTATGCACTTTGATATCAATAACCATATAGTGCCGTTCAAGTTTGATTCAAAGGAGTTGGAATGCGTTGATTGTGGGAAACAGTTCTCGAATTTCAAGCTGTTATCTGAGCACATGGCGAATATGCACTACAGGAATTACGTGTGTGGGAAATGCGAACGCGGCTTCGTAAATAAGGTCAATCTGCTCGCGCATAAGGACACCCACAAAACTGGGAACTTCTACTGCGATTACTGCGGCAAACTTTTCGATACGCGCCGCAAGAAAACAACTCACGAGCGAATGATACACACTATTCAGACAAAGTCGGTTAAATGTGGCTACTGTAGAATGCGATTCCAGAACACAGTACACAAGAACAACCACGAGATGAGAACGCACAAAAAACAGCTGTGTCTGTTCAAGTGCAACGCGTGCGATAAGAGCTACGCGCGTCAGCGCTCGTTGCGCGATCACGTGAACAAGACTCATCTGTTATCACGGCCTTACAAGTGCGCTTATAAAGGGTGCGATAAGGCGTTTTACCTCAACAAGGCACTCCAAGCTCATATAGTGACGCACGACAGCGGCCGACCGTTCCATTGCGAGCTGTGCCCTAAGATGTACCGCTCGGAAAAGTCGCTGAAGGAACATATGTATATACACACCCAAAAGAAGGAGTTTAAGTGTCCGTATTGCTACAAAAGTTATGTTCTTAAGGAAAATTTGACGCGGCATTTGGAAGAGAAGCATTAG
- Protein Sequence
- MAVEKLEIETYFGKCKCCLNYGYLRTMWEKHVVEEETEIYGQMLTQCFNIEWTRQGSEENDQICEDCIWKLREAYLFKKQVQRCQKEIQQCESEDYEIKSDPDNENYDVEYLEEDILDHPNSNDGSDEDSCKESLNLGESHDENHSQDDDDGTILKEDDDDEDYDENQDPEDADDTDFEPDSRRKRKPQEKHKDDADSETDAPKPKWPKRLPKDERSKTYKQYSMDALKGAVEAVTARRMNQKQAAKHYQVPRKTLSAKVREVKNEAGTAERPLTPQSISDEESLEKQDNETAMLVIKKHRENINSVLAYSNATPIRGYWGVGYVCAFCPDQFTTAAALKTHTHTHGNISKLYTVAHVRTHVTRLDVTGLKCRICSTKIEDLATLMSHLKEHDKPMHFDINNHIVPFKFDSKELECVDCGKQFSNFKLLSEHMANMHYRNYVCGKCERGFVNKVNLLAHKDTHKTGNFYCDYCGKLFDTRRKKTTHERMIHTIQTKSVKCGYCRMRFQNTVHKNNHEMRTHKKQLCLFKCNACDKSYARQRSLRDHVNKTHLLSRPYKCAYKGCDKAFYLNKALQAHIVTHDSGRPFHCELCPKMYRSEKSLKEHMYIHTQKKEFKCPYCYKSYVLKENLTRHLEEKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00119884;
- 90% Identity
- iTF_00119884;
- 80% Identity
- iTF_00119884;