Basic Information

Insect: Anticlea derivata
Gene Symbol: ct
Assembly: GCA_947579855.1
Location: OX388278.1:854938-875966[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.9e-27 2.8e-23 81.8 0.0 3 70 142 210 140 217 0.94

2 3 3.3e-32 3.3e-28 97.7 0.0 4 77 537 611 535 613 0.96

3 3 4.7e-31 4.7e-27 94.0 0.0 3 75 740 813 738 817 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.9e-27	2.8e-23	81.8	3	70	142	210	140	217	0.94
2	3	3.3e-32	3.3e-28	97.7	4	77	537	611	535	613	0.96
3	3	4.7e-31	4.7e-27	94.0	3	75	740	813	738	817	0.95

Sequence Information

Coding Sequence: ATGCTCCGCTCTCTGGACCTGGGTCCGAGCGATCGCATCGAGCGGCTCGAGCGGCTCGAGCGAGTCGAGCGCAAGCCAGAACGCTCGCCGAGCGTGGCGCCCGCGCGCGACGAGCGAAGCTCCGTCGAGCGGGAGCGAAGCGCCGAGCGGAGAGAACCAGGTCCCGAGGAGTGGCCCAGCACGCCCCCACTCAACAACAACACCACTCACCACAACAACAACGGGCCGACGCCGCTGCCGCTGCCGCCGCCCAGCCCCTTCCGCTTCGACGACCACCGGCCGTATCGCTTCGCCGACGACATGGGGCCATTACCACCCGGCGCCCTGGTCGGCCGGCTGGGCGACTCGCTCATCCCCAAGGGAGACCCCATGGAAGCGAGGCTCCAAGAAATGCTCAGATACAACATGGACAAATATGCGAACAGCAATTTAGATACGCTACACATCAGTCGGAGAGTTAGAGAGTTGTTGTCAGTTCATAATATTGGACAGAGGCTGTTCGCGAAGTATGTCCTTGGGCTATCGCAGGGGACAGTTTCGGAGTTGCTGTCGAAGCCGAAGCCGTGGGACAAGCTGACGGAGAAGGGAAGGGATTCGTACAGGAAGATGCACGCGTGGGCTTGCGACGAGGCCGCGGTGATGCTGCTCAAGTCTCTGATCCCTAAGAAAGTTGGTTCAAAAGACGGCAGTATTGGTCCTGGCGGTTTTGGAAGGTCCGATGGAGAAGGGGACGACCGGTTGGCGCACATCCTCAGCGAGGCTTCGCATATGATGAAGACCCCCACGGGACCCCCACACAACGATGATTCAAGAAGTAATGAAGACTCTAGCTCACCTAGAACGCAGTGTCAATCGCCATTTTCTAAGGACTCCAGCCAAAATAGAAGGCTAAAGAAGTACGAGAACGACGACATTCCTCAGGAGAAGGTGGTTCGCATCTACCAGGAGGAGCTGGCCAAGATCATGACCAGGCGGGTGGAAGATATTCGTCACAATCGCGAAGGTTTCCCTGGCGGTGGTATGCCCCCACACATGGAGAGGCCGCCCGAAGACATCCGTATGGCTTTGGAAGCATACCACAGAGAACTCGCCAAAATCCAGCCTGGTGGCAACATTCCCAACCTCCACAACTTGCCAGGGATGCCTCCCTTCCCCAACCTCCTCGCCCTCCAGCAACAAGCGATGCAACAAGCCCAGAATCAGCATATCAATGGCTCTGGCGCCGTCCAAGATCTCTCACTCCCAAAGGACAAAAACGCCAAAATGAACGGAATGACTGATAGTGATAAGGATAGATCGATGGACGCCGAGGAGGCTATCCGGCACGCGGGGAGCGCCTTCTCCCTCGTGCGGCCGAAGCTGGAGCCGGGCCAGCAGTCGACCGGCTCGTCTGCCTCCAGCCCTCTAGGTAATGCTATATTACCGCCAGCAATCACCCCGAACGAGGACTTCAATAGCTCAGCCGCGGCGAGCCCGCTGCAACGGATGGCATCGATCACCAATAGTCTAATCTCTCAGCCGAGCAACCCCCCGCACCACACGCCCGCCCAGAGGTCCATGAAGGCGGTGCTACCGCCGATCACGCAACAGCAGTTCGATCTATTCAACAACTTGAACACCGAAGACATCGTTCGGAGGGTCAAGGAAGCTTTGAGCCAGTATTCGATCAGTCAGAGGCTCTTCGGAGAGTCGGTTCTGGGGCTCTCGCAGGGGTCCGTGAGCGACCTGCTCGCGCGACCGAAGCCCTGGCACATGCTGACGCAGAAGGGTCGAGAGCCCTTCATTAGAATGAAGATGTTCTTGGAAGATGACAACGCGGTCCACAAATTAGTCGCGTCACAGTACAAAATCGCCCCGGAGAAACTGATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAATGACGAAGCCAATGCCTCCAACGCAGAAGATGATCTCAGACGCCACGTCTCTTCTCAACAAGATGCAGCACGAGCAACTCCTAGGTCCTGGCCACCTCGGCCACTTGGGCCACCAGCCGCCTCCACTACTGCTCACACCACCAGGTTTCCCCCCGCACCATGCGGTAACCTTACCCCCTCAGCACCACGATAATAATAATAAGGAGAGGAAGCCCCAGCCACCACCCCAGCCGCACCACCAGCCACCCATCATGCGCAGTCTGCACCAACACATATCACCCAGCGTCTACGAGATGGCAGCTCTGACGCAAGACCTGGACACGCAAACAATTACGACCAAAATCAAGGAAGCTTTACTAGCGAATAACATCGGCCAGAAAATTTTCGGTGAAGCCGTCCTCGGATTGTCACAAGGGTCGGTCAGCGAACTGCTATCCAAGCCTAAACCCTGGCACATGTTGAGCATCAAAGGTAGAGAACCGTTTATCCGAATGCAGCTTTGGCTAAGCGATGCGCACAACATCGACCGTCTCCAGGCGTTGAAGAACGAAAGACGAGAGGCTAACAAACGACGGCGCTCCAGCGGCCCTGGTCAGGACAACTCCTCAGATACTTCATCCAACGACACGTCAGAGTTCTACCACTCCAGCTCCCCCGGCCCCACGACCGGGGCTCCCTGCGCCAAGAAGCAACGGGTGTTATTCTCTGAGGAACAAAAAGAGGCATTGAGACTGGCATTCGCTTTAGACCCCTACCCCAACATGCCGACGATAGAATTCCTAGCTTCGGAACTAGGGTTATCAACGCGAACGATAACCAACTGGTTCCATAACCATAGAATGCGATTAAAGCAGCAGGCGCCGCATGGCTTGCCAGCCGAACCGCCAGCCCGAGATCAGTCCTCAGCCCCCTTTGACCCGGTCCAGTTCCGTCTCCTCCTTAACCAGAGATTACTGGAACTGCAAAAGGAAAGGATGGGCCTCGCGGGCGTACCTCTCCCGTACCCCCCATACTTCGCGGCGAATTCGAACCTCGCTGCGTTGATCGGTCGAGGACTGATCCCCCCCGAAGAAGCGACCAAAGACCAGAGCGGTGGTCTGGATCTGTCCATGCCGCTGAAACGAGAGCCCGACGGTGAGGATTACGAGGACGACGATGTCGAGAGTAATCTTGGATCCGAGGATTCGATGGATGATGAGTCAAAGACTGAGCCCAAGGCGGCGTCGACGCCGCAGGGGCGCTCCAGCCGACGGAAACCCGCCGCGCCGCAGTGGGTCAACCCGGACTGGCAGGAGGACAAGCCTCGCAACCCGGATGAGGTCATCATCAACGGCGTCTGCGTCATGAGGAGCGACGACTTCAGACGAGAGGCCGAGGAGACCGTTCGTATCGAGCCATCGCCGGTCCCGCGGGAGAGTTCCCCCGCTCCCCCGCGCACCCCGCAGACCCCCCTCGCGCCGCACACCCCGCGGCCGCCGCACACGCCGGATGACGTCATCCCCGAGGACAAGATCAAGTCGGAGACGGATGACGACCGGTGGGAGTACTAG
Protein Sequence: MLRSLDLGPSDRIERLERLERVERKPERSPSVAPARDERSSVERERSAERREPGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILSEASHMMKTPTGPPHNDDSRSNEDSSSPRTQCQSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDIRHNREGFPGGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGSGAVQDLSLPKDKNAKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPSNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPMTKPMPPTQKMISDATSLLNKMQHEQLLGPGHLGHLGHQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPQPPPQPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEEATKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSMDDESKTEPKAASTPQGRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRREAEETVRIEPSPVPRESSPAPPRTPQTPLAPHTPRPPHTPDDVIPEDKIKSETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01338275;
90% Identity: iTF_00662875;
80% Identity: iTF_00119498;