Basic Information

Insect: Anthrax anthrax
Gene Symbol: prdm10
Assembly: GCA_963971155.1
Location: OZ020119.1:147102-153351[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00024 0.012 16.9 0.6 2 23 677 698 676 698 0.96

2 10 0.00069 0.033 15.5 1.1 2 23 736 757 735 757 0.97

3 10 0.00047 0.023 16.0 5.2 1 23 839 861 839 861 0.99

4 10 0.00071 0.034 15.4 0.4 1 23 867 889 867 889 0.97

5 10 0.0015 0.07 14.4 0.8 1 23 895 918 895 918 0.97

6 10 0.00018 0.0085 17.3 5.5 1 23 923 946 923 946 0.97

7 10 3.6e-05 0.0017 19.5 1.5 1 23 952 975 952 975 0.95

8 10 0.00065 0.031 15.6 3.8 1 23 1035 1058 1035 1058 0.96

9 10 0.001 0.049 14.9 2.0 1 23 1080 1103 1080 1103 0.96

10 10 0.4 19 6.8 1.6 2 23 1134 1156 1133 1156 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00024	0.012	16.9	0.6	2	23	677	698	676	698	0.96
2	10	0.00069	0.033	15.5	1.1	2	23	736	757	735	757	0.97
3	10	0.00047	0.023	16.0	5.2	1	23	839	861	839	861	0.99
4	10	0.00071	0.034	15.4	0.4	1	23	867	889	867	889	0.97
5	10	0.0015	0.07	14.4	0.8	1	23	895	918	895	918	0.97
6	10	0.00018	0.0085	17.3	5.5	1	23	923	946	923	946	0.97
7	10	3.6e-05	0.0017	19.5	1.5	1	23	952	975	952	975	0.95
8	10	0.00065	0.031	15.6	3.8	1	23	1035	1058	1035	1058	0.96
9	10	0.001	0.049	14.9	2.0	1	23	1080	1103	1080	1103	0.96
10	10	0.4	19	6.8	1.6	2	23	1134	1156	1133	1156	0.96

Sequence Information

Coding Sequence: ATGCATTCTTCTAGCAACGGAAATGATGCAACTTTACATTACACTTATCATCGAACAAGCGCTTATGATCCCAATTTGTGTTCAACAGCAGCTAGATTAAGTCCTCCACCATCTCATTTACATGTAGATCATATTACTCAACATCAACAGCAGAATCCACAtttacatcatcatcatcaccataGTCAAAATGGCCAATTAATTAGCGACAATTACGGGAATATAATACTTATACCATGTAATCATGAAGAAATTCAAACACAACATAATGGTAATATTAGAGAAACGAATACAATTTACACAACAGATTTTGGTGCTTATCAGATATTACAGGATTCAAATCAAACAGCATATAATAATTACGATAGTAGATCATTTATTGAAGATGATGTAAATCATCGTCATATAACACATGATAGCAATcagcatcatcatcatcatcataattatcatCTCTTATGTGATAGTAGTATAGCTGTGAAAAATTCTATTGAAATGCATCCAGGAAATTCATTAAATCATCATTATAATCAAACGATTAACTCACACGAGAATAACATCCAATACACTGCTGCTCCTATATCTACCCCACCTGTCACAAATAATGTATCAGGTAATATTTCTGTACAAGATGTTGATAATCATTCGCAACTTAATTTACATAGAcattatcaaaatttttatataaataatgatgaaattaatgaaatgGATGAAACAGCAGCAGCTGCTGCAGCTGCAGCTGGTATAGTTGAAATGGTACAAGCTGTTCGTAATGAAATGAATCTTAATCATCATCATAGCCATCATCATGGTCATAATCATAATGATCATCATCAATATGGTGCTAGTGAACAACTAAACATGAACAATAACACTGGTGATAATGGTAATGATGATGACAACGATACTGATGAGTTTCGTCTATCACAAAATTCTACATCTGGATTAATGAGTACATTCTCAGAAACAAATTTTACTACATTAGAATCATCATTAATAGGACAACAAGAATTAATTGATAATTATGATTCAGTTGTAACAACAGCACCTATGACGGCATCGGTGGCAACAGCAGCAACAATGAGTACTGACCAccatcttcatcatcatcttcGTCAACATCATCAACATCTTGCACATTATAGTCAGACATCATCTAATgtaaagataataaaaaattccaGAGAAACAACTACAACAAATTTTGGCTTATCGGAAAAAGATCATCAAAGATTCTTACTTCGTAGAACAATTTCTCCATTATTGGCAGCTGTTAATGATATAGCACAAAGAGATGCTGAATTACAATCTTATTTAAGTCAAAATCGTTCAGCTACTAATGAGacaaatgatgatgatatcgatgtttttcaaataaatcaaACTGAAACTGAAACAAAATTCcatgataataatgatggaGATGATGATGACGAGGGCAATATGGAATATCTTGATATAAATGAAGTGAAACAACAAAACGAAAAGCATAAtgagataaaaataaaagaaactAGGATACTCATCTCGGATAAACCAGTAGAAAGCCGTGCTCGCGCTAGTCTTCCAACGAATTACTTGTATTTTGTTAACAATAAAAATGGATTAATAGTTCATGCGAAAAAAGAGATTCCAATTCGAACTAAATTTGGTCCATTCGAGGGTGAAATACGTTTAATTAGTGAATCATCTGTAGATATTCGTCAAATTCAATCGAATAAAATGTATCCAATATTATTGATTGGCGATGATAAAATTCTCGTCGTATCGAATGAGAACACATCAAATTGGATGAGATTTGTTCGTATGGCTAACACTTATGATGaacaaaatgttttattaattgaaGATAATGATGAGAAAttatattttcgttgttgtCGAACAATTAACTCAAAAGAGGAATTATGTGTTGGTTACAGTGAAGAGTATgcaacaaaatataatttacaattCATCAAACCCGATGGGGATAATAATGAAGAAgagaaaaagataaaattgCATAGTAATGTTAATCTATGGTCATGCTTTGAATGtgatcaaaaattttatacttcTAATGAATTACAAAATCATCTAAATATACACGATGTAATTGAGAATGAATCAATTAAATCTGAGTTTctaaaagaaaacaaaaggaaaaaaaggaaaatacgtaagaaaacaaatttatcAGCGTTGCAAAAGAATTCAAGTAGatgtttttattgttataaagTTTTTATGACATCGATTAGTCTAAAGAAGCATATTGCTAGCCATATAACTGAGAATCGatcaaagaaaattaataaaaaacaatcagaattaatttgtaatttaacaattgatgataaaataaaatgctgCTATCGGAAATTTAGTTCTGAAGAAAAATTGAGGGTACAGAATACAGagaatgttttatttttggCTAATTCCAAATTATTTCGACAACAGTTCTGGAAGGGACCATTTCAGATTTTGAAACATCGTTTagtacatttaaaaaatgaaacgaaaccatttaaatgttCACAATGTAATCAATGTTGTTCAACACAAACAGCTCTTGCATCACATATTCGAAGTCATTCAATTAATAAACGTTTTCGTTGCGTTTATTGTTCAGAATCATTTAAACAAATTGCTGAATTAAAAAATCATGTTATTAATCATTCAATAAATGGAATATATCCATGTAATTTATGTGGAAAAAAATATCGTGAATATAATTTAGCACGTAAACATATTCGTGTCTTTCATCCTGGTATTACGTATTCATGTACGATTTGTAATAAACAATTTGTACATATGAGCACATTACGAAGACATATTCAGAGTTGTCATTCAgataaaaaagattttttatgTTCTAAATGTGGACAACAATTTAAACGtaaagataaattaaaatctcaTATAGAAACAGTTCATTCAGTAAATCGTAAACCAAGAAatcataaaagaaaaaaaaatataaatgaaaataataaaaatacgaGCAATTCTACAAGATCACAACGTATAAAATTAACACCGAAAAAAATGAATTCTATTAAATCATCATCAGCGGTAATTGAAAATTCTGTAAATGATTATGAATGTTATGCTTATAAATGCCATCAATGTAAATTTGGTTTTAAACGACGTGGAATGTTAATTAATCATATGGTAAAAAGACATCCAGATATTCAAATTGATTCTATACCAGAATTAAATTTACCAATTGTTAAATTTCaatcattatttttttgtcCATATTGTacaaaagtatataaaaataattcaaaacgtaaaattcatattataaaGAGTCATCCAGGACAAGAATTACCACCGTCAGCTAGAAATAATCCAAAAGAATTATTAAATGCTAGAACAATTGGTAGTATTGAAACAGATCCACAACGTTGTCAATGGTGTTATAAACAATATGCAACACGTAATCGtcttttattacattataaaaaGGAGCATTCACAAAATTTGGAAATGGAAGCACTTAAATCAACTGAAATTAAAACTATCGAAATGTTACCATCATCAACAGaacaaaatattgaattaaatgGAAATAATTATGGTGATCAACTTGATTATGATGGacaaaatgaatttcaaaGTGGTGAACAATTTATAGAACAATTTTATCATAGTTCTTTACCACCAAATTCAccagaaaataaattattaaaattaagtTCAGCTGCATTAGAATTATCATCGATTGAAGATCggaaattttttgattttttaaatgaacGAACACAAGATACACTATCATTAACTAATAATTCATCAATGagaaataatagaaaattaattactAATGATAATATGGAAAATACTACTTTAATATCCCattttaataatgataatgataatgcAACTGATGATATTGTTAATGTTCATAGTACTAgaaatgttaattttaaaattgaacaTAATAATGAgacatcatcatcatcgtcatcatcatcagttaataatgaattaaatagATTACCAGAATTATTTGATGAAACGATCACttgtatttaa
Protein Sequence: MHSSSNGNDATLHYTYHRTSAYDPNLCSTAARLSPPPSHLHVDHITQHQQQNPHLHHHHHHSQNGQLISDNYGNIILIPCNHEEIQTQHNGNIRETNTIYTTDFGAYQILQDSNQTAYNNYDSRSFIEDDVNHRHITHDSNQHHHHHHNYHLLCDSSIAVKNSIEMHPGNSLNHHYNQTINSHENNIQYTAAPISTPPVTNNVSGNISVQDVDNHSQLNLHRHYQNFYINNDEINEMDETAAAAAAAAGIVEMVQAVRNEMNLNHHHSHHHGHNHNDHHQYGASEQLNMNNNTGDNGNDDDNDTDEFRLSQNSTSGLMSTFSETNFTTLESSLIGQQELIDNYDSVVTTAPMTASVATAATMSTDHHLHHHLRQHHQHLAHYSQTSSNVKIIKNSRETTTTNFGLSEKDHQRFLLRRTISPLLAAVNDIAQRDAELQSYLSQNRSATNETNDDDIDVFQINQTETETKFHDNNDGDDDDEGNMEYLDINEVKQQNEKHNEIKIKETRILISDKPVESRARASLPTNYLYFVNNKNGLIVHAKKEIPIRTKFGPFEGEIRLISESSVDIRQIQSNKMYPILLIGDDKILVVSNENTSNWMRFVRMANTYDEQNVLLIEDNDEKLYFRCCRTINSKEELCVGYSEEYATKYNLQFIKPDGDNNEEEKKIKLHSNVNLWSCFECDQKFYTSNELQNHLNIHDVIENESIKSEFLKENKRKKRKIRKKTNLSALQKNSSRCFYCYKVFMTSISLKKHIASHITENRSKKINKKQSELICNLTIDDKIKCCYRKFSSEEKLRVQNTENVLFLANSKLFRQQFWKGPFQILKHRLVHLKNETKPFKCSQCNQCCSTQTALASHIRSHSINKRFRCVYCSESFKQIAELKNHVINHSINGIYPCNLCGKKYREYNLARKHIRVFHPGITYSCTICNKQFVHMSTLRRHIQSCHSDKKDFLCSKCGQQFKRKDKLKSHIETVHSVNRKPRNHKRKKNINENNKNTSNSTRSQRIKLTPKKMNSIKSSSAVIENSVNDYECYAYKCHQCKFGFKRRGMLINHMVKRHPDIQIDSIPELNLPIVKFQSLFFCPYCTKVYKNNSKRKIHIIKSHPGQELPPSARNNPKELLNARTIGSIETDPQRCQWCYKQYATRNRLLLHYKKEHSQNLEMEALKSTEIKTIEMLPSSTEQNIELNGNNYGDQLDYDGQNEFQSGEQFIEQFYHSSLPPNSPENKLLKLSSAALELSSIEDRKFFDFLNERTQDTLSLTNNSSMRNNRKLITNDNMENTTLISHFNNDNDNATDDIVNVHSTRNVNFKIEHNNETSSSSSSSSVNNELNRLPELFDETITCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -