Basic Information

Gene Symbol
-
Assembly
GCA_963971155.1
Location
OZ020123.1:1871760-1880357[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00042 0.02 16.1 0.4 1 21 435 455 435 456 0.96
2 16 0.0067 0.32 12.4 4.1 1 23 557 580 557 580 0.95
3 16 0.05 2.4 9.6 1.6 1 23 628 650 628 650 0.97
4 16 2.5e-05 0.0012 20.0 1.5 1 23 688 710 688 710 0.98
5 16 0.00051 0.025 15.9 3.2 1 23 721 743 721 743 0.98
6 16 0.00058 0.028 15.7 0.7 2 23 772 793 771 793 0.96
7 16 0.41 20 6.7 1.7 1 23 1094 1117 1094 1117 0.85
8 16 0.17 8.2 7.9 1.1 1 23 1138 1161 1138 1161 0.95
9 16 8.6 4.1e+02 2.6 3.2 1 23 1188 1210 1188 1210 0.97
10 16 0.55 27 6.3 3.4 2 23 1237 1258 1236 1258 0.95
11 16 0.0087 0.42 12.0 1.1 3 23 1310 1331 1309 1331 0.97
12 16 0.98 47 5.5 3.5 1 23 1354 1377 1354 1377 0.97
13 16 0.032 1.5 10.2 2.4 1 23 1388 1410 1388 1410 0.98
14 16 0.091 4.4 8.8 5.8 1 21 1520 1540 1520 1542 0.95
15 16 0.00042 0.02 16.1 0.9 2 23 1594 1616 1593 1616 0.95
16 16 0.00082 0.04 15.2 4.8 1 23 1707 1729 1707 1729 0.97

Sequence Information

Coding Sequence
atgcgtaaaatttttaattcagaAATAAATTCAGTACCAATATCACAGATGTTATCATTTGCAACACCAATTAATGTTAGACCAGATGATGGTCTACCATCATCAATATGTTATATATGTTTAAATCGTTTAATTGGTGCATATAAATTTCAACAAATGTGCATTGATTCTGATTTACAAATGAgattagaattaaaaaaattcgaaaCATATAATACAAGTAATATTGATAATAGAATACGATCAATATCACCGAATATATTAGATAACATACGATCGGGTGTAACTGAAGGTATACCAGTTGAttctgatgatgatgatgttgataattattgttatgatgataataatggtGTCAATAAGGATGGTAAAGATCATCATCACGATGATGATCATATTAATAATGTTGacgatgatgataatgatgatgatgtgaTTATAATATCATCAACAATTGATTCATTAATAAATCGTCATAATAATGAAGATTCATCTAAAATAGAAAAAAGTTTAAATGCCGACCATATagaaaaaagtaataaaaaatcaattgaGAATTTAACTGGTACAgatattgtattaaaattagaaaatgatAATCCAGAATATGATAAACAAGTAAAAATTGTTGATACGAAATATTTGACTAATCAATCTGGTACTAGTGATAATGAACAACAAATTAgaaatcaaggaaatcaaaagaattttacaaatacaataacaaaaagaataattgaaaatacttgtaatgaaaatgagttaaaaaataattcttcACCTTCAATAATACCTAATATACAGCAAAATTCAAAACAGCAACAAATTGCAAAGATAACAAGTGCGATTTCTTTAGCATCACAAAAATCTCAGCAACAAcaatacacaaatcaatttAAAACTTCAAATAATGAAACGAGTATAATAAAATCGTTGTTACAGACTGCAGTATCCAAACATCAATCATCCCtttcatcattatcatcaataaataatttgcAAGTAAAAAGAACGATGGCGATGACAgcgaaaacaacaacaacagtaACTTCATCATCGGCATCGCCAACACCAGTGGCTGTTACAACGACAACATCAATATCAAAACCAACATATTCAATAAAGCCATCAACTGCATCAGCATCATTGACACGACAACAATACAATTCTGCGGCTATAGATGGTCAACAACATCAACAGAATAAAGGTGATCATCAACAACATCAACAGAATAAAGGTGATCATCAACAACATCTACCGAATACATCAAACGAGACAAATTTGCAAATGAAAATCGTTGCATATGTATGCAGTATATGTAAAgttgtattttcaaaaaaggAGAATTTCATAAAACATAAAAGAATTGATTGTCCAagaataaaatcatcatcattgaCCCAATCGTCTACAATACCAACATCATCGTTACAAAAACTTTTGACATCGCCATCTAGACCATTACAAACAAAACCATCTTCATTATTATTGACCAAACCGTCTACAACACCAACATCATCGTTAGGAAAACTTTTGGCATCACGATCCAGACCTATACAAACAATATCAACTTCATTATCTTCACCATCAACATCAGCACCATCAACATCAGCACCATTAACATCAACAACAATGTCAACTAAATCTCAAAAGGATAATATATTATACTACAGATGTACTGAATGTTCAAAatcatataaacaaaaaattgattttcatcaacatttaataaacaaacatTCAACAAGATCATATAAACCATCTCCTATTCATAATTCAATACAAGGAAATATAATTGTTGATTGTTCACCAGTATATGTGTACGATAAGCAAAAaaatcaaaatcaaaaatcgGATACATCCTCAACaactacaaaaaaatttagttgttatttatgtaaaaaagattgtattaatttaaatgGATTAAATAGACATATATTAGAACATAAAAGATCATCGATATCATCAGCAACAAGTAAAACTGTATCATCagttaataataatgataatgcTAATAATAGTATAGCAAAAGAGACGTCACCACCAAGTAAAACGTCGTTTAAATGTAGTGTATgtaacaaattttttacaaattggAGTGAATTTGGACAACATTTACGTGAACATAAACATACAACTAATTTTGTACCAAATAAACATCAATGCAATTTATGTAAAAAGGACTTTAATACATGGACAGAATTGAgtacacatttaaaaaatcataaaataagTTTATCTTATGATACAAATAATACAagAACAAATTCAACTGTTAATATTAGTGTTAATATACATACAGAATCATTAAAATGTGAATTATGCAGAAAAAGTTTTTCAACAAAAGATGAAATATTGCGGCATTTATTAGAACATGAGCATAATTATTCAAGTTCAACGTGTgtttcaaaattattaaataatattaacaaTAGCAAtgttgaaaataataaaaactatcaacagcaacagcagcaTCAGTTACAAGTGCATTCAGTACAGGAACAACAGAAACAACAACGAATTAACgTTTCTTTACAAAATCAATGTAATAGAGAAAAACAATTAACGGGAATGAGTTTGAAGCGTTATTCATCAGCAACTACATCCAATAGAAATGCAATAACGACAACATCTACGTCGACATCACCGCCAGCAATAACCACAATAACAACGGCAATAACACAGTCCTTAAATATTGCAAAAAGAATTCAAAGTAGTGATAACGATTGTAcagttaaaattaaaaaagaaaaatcagaTGAACAAGAAATATATAAGGAATCAATGTCAACTGCGGAATCAGAAATCCAAGATATTAAAACGACGACAATAGAAAATAATTCATCATTAGCTTTATCAACTAAATATCCAGTTTATACTGTATCAGTATTATCACCAACACcctcatcatcatcatcatcatcatcatcagaacagatAGAATTTATTTCagttgaaaataatttaatggataatttaataaatgaagAGGAAGAAGATGTCGATATTAAAAATGTACCATCATTATCAGATCCAATATCATCATCTACACAGATATCAGCTAATGCTGAAACAGCATCTATGTCAATTGAAAATTCAGTTAATGATGATTATGATAcagatgatgataatgatatgaaagaaattgatgaaaataaaatggataatttaaatacaaaagtACAATGTAATAAATGTGGTTTATATTTATCAGCAAAAagtcataaaaatcatattaaaagATGGCACGGAAACagTCAAccatattttcaatttttgtgtaaattaTGTGGTAAAGGTTATCGTGATAAGAATCAAATTATTGACCATTGTAAAATTTCTCATAAAATGacattaaatataaatgaaataattgtAGAATTTCCAAGaaaaaattcaaataaatttaaatgtgatTATTGTACAGAATATTTCATAAATCGTTCAATGCAATTAGGACACGTACGATTAAAACATAGTAAAGATTATAAATcatttgtaattaaattaattgataGCCAAGAAAATGATGCCGAAAagaataatttaataaattacaattgTTATTTTTGTGGTACTAAACATAATGAGAAGAATTCATTATTACAACATTTAAAAGTTCACAGGATTAGTTTTAATAATAACATTACATCAAGTCAAAAAGgAAATACGCCATCTGAAGATCAAACTGGATTGAAACTTCGTTGTGAattttgttcaaaattatttcataaaaaaaatttaaaatatcatttgATATCAGTACATTGtaaaaataaaagtttgCATCAACGAAGAGCAACAAGATtacaaattaataaagaaaaattaatggATGACAAAGAGACAAATAATATAAAGGATAAtatagataataaaaataaaacgcaAATAAAATCtgaatataaatttgataataattgtccaatatgttttaaaaattttgttaatacCCATATATTAAGACGACACATACGTGTTATTCACATAGCAAGAGGGGATGTTTTAAAAGAgaatttaaTTATGGACAGTATTGAAAAGCAAGGCATACAATTTCGTTGTGATCaatgtacaataattttacattcatataaaaGCCTTAGAAGACACAAAAAAGTCAATCATGATGATAAAAAACAAACTGAAATaCAATGGTATCAATGCCGTACATgtaataaaagatttttattaaaatcaaattatgaatcacatgtaaaaattcatgaatcAACAAAGAATCAACAAAAACAGCAACAAGAAAGAAAAGATAATGAGACGGAAGATGAAGATTTGAATATGCCAGAATTGTCAAAAGTTAATTCGAATTCAACAAGTGAAGTAAATAGTTTGGATGAAATGAAAGTacaaatgaatgaaaaatCGACTGTTGAAGAATATGATAATGATGAAAAatatttaCCAGGACGTTTAGAACCGCACAGGTGCATTTTTTGTCGTAAAATTTCTGGAAATCGGTCATCATTTACACGacatttacataaatttcatgaaaaatatttaaaaaagaaattaccACAAAGTGATAAAGTACATCAATGCAAGATTTGTACACGAATTGTATCCAATCGTTTTAAATTGAGAAATCATATGCGCTGTCATAAACCAGACCCAGATGAATTAAGAACTTTAAAATTATCATTACCAGTTGAGTCATCATCATCGATTCAATCATCATCTACTGTTAACAAGGAAACTGAATGTGCATctaaaaatattgaaaataaaacgataacaaaattaaaatattcaacatcatgtaaaatatgtaaaaaatcATATGCATCAAGAGGAAATGTTAAACGTCATTTAATGAACgatcataaaataaataatttacaatgcgataaatacataaaattattaaacagGAAGGGTCATTTAAAACGGcatttaataatgaaacatAGAAAACTTTTGCAAGAGAGTAATGAGAAAATGATGCCTAATAATGATATACAATCACAATCgtcaagtaaaaaaaataaattagaaacAAGAAATACATCGTCTACACcaacaataaaaacaacaaaagCAACAGAGgcatcaccatcatcatcatcattgcCATTAATATCATCTGTTCAATTATTTATGTGTCGAATTTGTGGTAGAAAATTTATGCGGAAAgactatttaaaaaaacataaacatGTACATGAGAGAGGttacAGAAATCTTACAAAATTTGTACGCTGTACAATTTGtagtaaatatttaaaagaagaTTCGACTTCATATCATTTTGAAACTTATCATGCATTTAgtaatgaaattataaaaaatggtgaatataaaaattacttaaatACGCATGAAAGTGTAACATGTGGTAGAttaaattatgataataaatCATCAAAGGAGAAATTGTTACAAAGAAGAAAGAGCATACATCAAATTGAAACAACAAGATCAACATCCTTATCATCATCTCCACTGTTATTAACTGAACAATATAATCCGAATAAACGAATGACTAGACGGAATACCATTATGGTTGATGCAACAGAAGcaaatattttcttatgtTTAGAAGATGTTATAAAACcaaaaagaagaaaatcaattttttcaaatgtaaatctggaacaaaatgaaataaaagaaaactcAGGTAATTTAAAAGAAGATGATAAATGTGTATCAACAACAGATGttgttgaaaaaaataaaattcaagaaaataaCACAATAGAAAGTATAGAAAAATCGGATGTTGctgatgaaaataaaactcaagaaaacaaaacaatagAAACATCTATAGGTTATCAAAAGTCTTCAGAAAAAATCAATTTAGATTATTTGAAATCATTAGATTCTGTAGAATCTGAAAAAGTTAAAGaatttgaagaaaataaaaataatgatcaaaatcagaacaaaaataatttacaatttgtTAATAATTGTGAAAACGTTGCCTTAAAAACCAAAACAATTGATGCTAATCAAGTAATTAAGGGAAAAGAGAAACAAAATGATGATCAAATCATGAAGGAAATAGAAAAAGAATACGttaatgaaaaagaaaaatatgaagaaaagGATAACACAAATGTAATGGAAGAAAATGATgttgaaaatagaaaaattagTGAATATCAGGAGGTGGAGAAGATTTTCGAAAAAGTAgaagaaaatttcaaagaaTCATCAGAAAAGCTTCaagaaaatattaatgaattaattgaaaaaattgatGAATCAAATAGAAGTATTAATGatgaattaaaagaaaacactacacatgaaaaattgaatgatGATAAGGAAATTTCAAAAGCTGAAAACAAACATGAAAGCAATGATAATGACGATGAGATACAAAAGGATACAAGTAACATCTTAAATgatgttaaaaattttcagaaaGATGAAACTGAAAATGATGAAGAAATGAAATTACGTTTAAGTACTAGTTcagaaattgaaaattacgATGAATGCTGA
Protein Sequence
MRKIFNSEINSVPISQMLSFATPINVRPDDGLPSSICYICLNRLIGAYKFQQMCIDSDLQMRLELKKFETYNTSNIDNRIRSISPNILDNIRSGVTEGIPVDSDDDDVDNYCYDDNNGVNKDGKDHHHDDDHINNVDDDDNDDDVIIISSTIDSLINRHNNEDSSKIEKSLNADHIEKSNKKSIENLTGTDIVLKLENDNPEYDKQVKIVDTKYLTNQSGTSDNEQQIRNQGNQKNFTNTITKRIIENTCNENELKNNSSPSIIPNIQQNSKQQQIAKITSAISLASQKSQQQQYTNQFKTSNNETSIIKSLLQTAVSKHQSSLSSLSSINNLQVKRTMAMTAKTTTTVTSSSASPTPVAVTTTTSISKPTYSIKPSTASASLTRQQYNSAAIDGQQHQQNKGDHQQHQQNKGDHQQHLPNTSNETNLQMKIVAYVCSICKVVFSKKENFIKHKRIDCPRIKSSSLTQSSTIPTSSLQKLLTSPSRPLQTKPSSLLLTKPSTTPTSSLGKLLASRSRPIQTISTSLSSPSTSAPSTSAPLTSTTMSTKSQKDNILYYRCTECSKSYKQKIDFHQHLINKHSTRSYKPSPIHNSIQGNIIVDCSPVYVYDKQKNQNQKSDTSSTTTKKFSCYLCKKDCINLNGLNRHILEHKRSSISSATSKTVSSVNNNDNANNSIAKETSPPSKTSFKCSVCNKFFTNWSEFGQHLREHKHTTNFVPNKHQCNLCKKDFNTWTELSTHLKNHKISLSYDTNNTRTNSTVNISVNIHTESLKCELCRKSFSTKDEILRHLLEHEHNYSSSTCVSKLLNNINNSNVENNKNYQQQQQHQLQVHSVQEQQKQQRINVSLQNQCNREKQLTGMSLKRYSSATTSNRNAITTTSTSTSPPAITTITTAITQSLNIAKRIQSSDNDCTVKIKKEKSDEQEIYKESMSTAESEIQDIKTTTIENNSSLALSTKYPVYTVSVLSPTPSSSSSSSSSEQIEFISVENNLMDNLINEEEEDVDIKNVPSLSDPISSSTQISANAETASMSIENSVNDDYDTDDDNDMKEIDENKMDNLNTKVQCNKCGLYLSAKSHKNHIKRWHGNSQPYFQFLCKLCGKGYRDKNQIIDHCKISHKMTLNINEIIVEFPRKNSNKFKCDYCTEYFINRSMQLGHVRLKHSKDYKSFVIKLIDSQENDAEKNNLINYNCYFCGTKHNEKNSLLQHLKVHRISFNNNITSSQKGNTPSEDQTGLKLRCEFCSKLFHKKNLKYHLISVHCKNKSLHQRRATRLQINKEKLMDDKETNNIKDNIDNKNKTQIKSEYKFDNNCPICFKNFVNTHILRRHIRVIHIARGDVLKENLIMDSIEKQGIQFRCDQCTIILHSYKSLRRHKKVNHDDKKQTEIQWYQCRTCNKRFLLKSNYESHVKIHESTKNQQKQQQERKDNETEDEDLNMPELSKVNSNSTSEVNSLDEMKVQMNEKSTVEEYDNDEKYLPGRLEPHRCIFCRKISGNRSSFTRHLHKFHEKYLKKKLPQSDKVHQCKICTRIVSNRFKLRNHMRCHKPDPDELRTLKLSLPVESSSSIQSSSTVNKETECASKNIENKTITKLKYSTSCKICKKSYASRGNVKRHLMNDHKINNLQCDKYIKLLNRKGHLKRHLIMKHRKLLQESNEKMMPNNDIQSQSSSKKNKLETRNTSSTPTIKTTKATEASPSSSSLPLISSVQLFMCRICGRKFMRKDYLKKHKHVHERGYRNLTKFVRCTICSKYLKEDSTSYHFETYHAFSNEIIKNGEYKNYLNTHESVTCGRLNYDNKSSKEKLLQRRKSIHQIETTRSTSLSSSPLLLTEQYNPNKRMTRRNTIMVDATEANIFLCLEDVIKPKRRKSIFSNVNLEQNEIKENSGNLKEDDKCVSTTDVVEKNKIQENNTIESIEKSDVADENKTQENKTIETSIGYQKSSEKINLDYLKSLDSVESEKVKEFEENKNNDQNQNKNNLQFVNNCENVALKTKTIDANQVIKGKEKQNDDQIMKEIEKEYVNEKEKYEEKDNTNVMEENDVENRKISEYQEVEKIFEKVEENFKESSEKLQENINELIEKIDESNRSINDELKENTTHEKLNDDKEISKAENKHESNDNDDEIQKDTSNILNDVKNFQKDETENDEEMKLRLSTSSEIENYDEC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-