Aant012761.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- Rreb1
- Assembly
- GCA_963971155.1
- Location
- OZ020117.1:67702936-67709003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.015 0.73 11.2 0.6 1 21 259 279 259 281 0.96 2 14 0.00086 0.042 15.2 0.2 1 23 291 313 291 313 0.98 3 14 6e-05 0.0029 18.8 7.5 1 23 319 341 319 341 0.98 4 14 0.24 11 7.5 3.3 2 21 543 562 543 563 0.94 5 14 4.1 2e+02 3.6 0.3 1 19 606 624 606 627 0.76 6 14 0.022 1 10.8 0.1 1 23 790 812 790 812 0.97 7 14 8.3e-05 0.004 18.4 0.9 1 23 821 843 821 843 0.99 8 14 0.0021 0.1 13.9 2.0 1 23 849 872 849 872 0.97 9 14 0.0025 0.12 13.7 2.1 1 23 1209 1232 1209 1232 0.95 10 14 0.00022 0.011 17.0 0.3 2 23 1538 1559 1537 1559 0.97 11 14 0.37 18 6.9 6.3 1 23 1565 1588 1565 1588 0.97 12 14 3.9 1.9e+02 3.6 6.0 1 23 1653 1675 1653 1676 0.95 13 14 0.22 11 7.6 1.1 3 23 1725 1745 1724 1745 0.91 14 14 0.0064 0.31 12.4 4.8 1 23 1751 1773 1751 1773 0.99
Sequence Information
- Coding Sequence
- atgatgaaaGCAACTACAACATTTCAAACAACAGCAACAGAacatcataataataaaatggaAAGACGAAGACATTCTTCATCATCATCGACATCAGAATCATCAATTGAACCAATCACTGAATTAGGACGTAATCTTaagaaaaagaataaattaatttcatcATTATCTTCCACAAAGAATGAATCAACGAAAACATTAACGACATCAACCGAAACAGTAATATCAACGACAACAATAccaacaacaaataaaataaaaataaaatcattacCATTGATTAATGATTCTGAAACATATGAATCTGAAGACAACAGTGATGGTAGTGGTCATAGCAGTAACAATAGTAGTGAAGGTGATAACAACACTACAAATAATATACGatataataaaagaaacaGTAATAGTAATCGTTTTGATCGTGAAAGGCATATGCATATTGAATTAAGTGATAATCCAAACTCATTGCGCAAGAAATTTCGTATCAGCACACCAAAcagtaaaaattataatcataGTAGCAGTAGcaataatattaataacaacaacaatagTTATAGTctaaataacaataataacaacagTCCATCTTATACCaaagCAGATACAACGATGGTAAAGACAACTGAAACCGATTCAATAATAATGGCGACATCAGTAGATCGTACCAATAACGAATCCGGATTTGTTGATACCAGCACTCATAATAGTAGCCATCACTCTAGTCCAGAATCAATTATTGGTAACGAACGTAACGATCGTGATGATGTAAAATACGTTTGCCCAATATGTGAGGTGGTATCAGCAACACCACATGAATTTACAAATCATATAAGATGTCATAATTATTCGTCAGGTGATTCAGAAAATTTCACTTGTCGAATATGTTCGAAGGTATTGTCCTCAGCATCATCTTTAGATCGTCATGTACTTGTTCATACGGGAGAACGACCATTCAATTGTAAATATTGTCATCTAACATTCACTACAAACGGTAATATGCATCGTCATATGAGAACTCATAAGCAGCATCAACAGCATCGTAAAGTAAATAGTAGTCACGGTAGTAATGGAAATGGAAATGGCAATAACAGTAGTAGCACGATTGGTACTAATGTTAACAATATTGAAGACAGTGGTGGTATTGGTAATCCACACAACAGTAGTGGTACAAATAGTAGCAGTAGTAGTCGTGGTAATGATAGTGGAGGTGGAGGTGATGGCGAAAGTTATGAAAGTGATGGTTGCTCAACAGATTCGAATGCTAGTAGCTCgaataataacaataataataataataataacagcaacaacaataacaataataataacaataacagCAATAATAGCaacaattataataataataatattaataataacaataataataataacaataatcaTTATAAACGTAAAAGTACTGACGATGATAATGGAATAATAAAAAGGCGAATGAAAACGACCATCAATAATAACATAATCGACGAAAATGAGACCGATATAACAAATGTTCAACATACATCAATCCAAAAATATTGCTGTCCGGTATGCAATCGTAATGACTTCATTAGTATGCTATCATTAGGTACACATATGGATCGTGAGCATCCAGGTATTCCAGCTAAATGTCGACAATGTGAAGTTGTATTTAAAACACATAAATCTTTGAACGCTCATCGATGTTTAAATAAGGTCAACATTACGCAAGGTTTTAAAGATATAGATTTCGTTGATTTTTCAAGTGAAAAGTTTCCACTTATAGCAAAGTCATTATGTGAGCAAACAATACGAACATCGAtaacaaatcaaaaatttgaatgCCCGAAATGTTATCGTGCCTTCCCTTGTGCTAGTGCTGTTGATATTCATATTAAGGATTGCGGGGAATTGCCACAGGACTACTCATTACGAAAAAGAGCGTACAGTGAGAGTTCTGAAGAAGACAACCGTAGGGATGAATTTTTTGCTCATCTtgatttacaaaataaatcaGCAATGAGTTTGGCAAGTACAATTTCATCACCACGTACGTCCGAAAAATCAGACAAGGCTGATGATGAAAAACCAATACAAGAAATGTCTCAACAGTACAAGGAAGAACGAAATCAGTATCAATCGCCACGTTATCAACAAATGTTTGAAAAACAAGAATACCACCCACAgttacaacaacaacaacagcatGAATCAAAAGATTTAGCAGATATTCAATCTATTTTAAACGTGACATCATCGAACAGTTTTCTacgaaattttgaaaaatgtgTAAATACACCAAGCAGTGAATGCAATTACAGTAAAGATGAAGAAGAGGCACAAGACGCTTTCACTTCAGAATTTCGTAAAATGAAATTGAGAGGGGAATTTCCCTGCAAATTGTGTACTGCAGTATTTCCGAATCTCAGAGCTCTAAAAGGCCATAACAGAGTCCATTTAACGGCAGCTGGTGCTGGTCCATATAGGTGTAATATGTGTCCATATTCGATTCATGATAAAGCGGCACTCATCCGTCATATGAGAACTCACAATGGTGATCGACCTTATGAATGCGCTGTTTGCAACTACGCTTTCACTACAAAGGCTAATTGTGAAAGGCATTTAAGAAACAGACATTCAAAAACAACCAGAGAAGAAGTTAAACGTGCTATTATTTATCACCCGTCAGAAGATTCTAGTTGTGATGATCCAATGAAAAAGCTCCATTTATTCTCATCACCAGAATTTGAAAACGATGAAGAACATCCTGCACCGAAAGATCGGTCTACTCCTGTATcacatttaaaagaaatgttACAGTCTGAAAAGCCAATTAAGATTCAAGTTAAAAGTTTggaaaaattaattgataaaaatgcaGCGTTATTTGATGATCATGAAAAGAATTATGAAGATAATAATCAAATTGAAATAAATCGGCCAATGGATCTTAGTATGGATGTCTTAGACTTAAGTAAAAAGTCTAAAGCATTAGAACCTGTTGAAATCAAACATGAACAAGAGCCGACACCTTCTGAACAAGCTAAGAATAATATTCCACAATTGGATAAAAATCAACTCATATTCGCTCAACAACAACTTTTTAGTGAAACATTACCGAAATTGGATCCAGcacatttttttcaattatcaCAAATATATCGAAATATGCAACTATTTCCTCATCTTCACCCATTTTTACTATCAAATTCATTGATGCCaaatatgaatgaaataaataaattttctccCGGAATGCTTATGAATCCTTTGTTTGTTGGAGGATCAGATCAGCAAATATCTCAATTGCCGAACAATATGCCTACGATGCCCAGCAGACCACAGTCGCAACCTTTACAATCACCGTTGGTAAATAAACCTTTGATGGAATCGTCTCTTCAAAAGGCTACTCAGCCTCCACCACCACCACCATCAACACAGATTTTGCAAAAATCATTAACACAACCACATCCTGCTCCTTTATCTACTCAGATGACAATACCACATCATCCTCAAATACCAAGACCTTCTTCTCAACCACCTTTAGTCCCACAGCATCAAAATTCTGGACCTGTAAAAATGGTAATAAAAAATGGTGTTCTTATGCCGAAGCAAAAGCAAAGACGTTATAGAACGGAAAGACCATTTGCTTGTGAACACTGTTCGGCTAGATTTACATTGAGATCAAATATGGAACGTCATATAAAACAACAGCATCCCCAATTTTGGGCTCAGAGACAACGCAGTGGACATCATGTTATGCGACGAGGTCATAGCAACAGTATTATGCCGCATCAAATCACTACGCCACAGGTATCACAATCTGGAACAAACTTAGCACCAAATACATACAACACGATCTCAGATCAAGTTAAATATGCGCTTTTGGCACAACAATTAAAAGTAAGAAAAGATACTGATATTTTACAACAAGCTCTTGCTCAAAATAATACTGCTATACTACCTAATAACATTCTAAATACGAATTCAAATCCAGTTCAAAATCAAGATAATATGAATCAAAATAATACTATTAACATTGAGGATGATGATCCAAAGCTAATAATTGAcgaaaaagaagaagaaattgAAGACGAAGAAGAAGCAGAGGACGATGAAGTTCATTGTGAAGAAATGAAACCAGAAGATCTTTCAAAACGTTCTAGCCAAGATGAAAATTGCTCTACTGCTAAAAAAGTAGCAGAGTCTATTTTAGAACAGGCAATAAAAGCTGGTAGTAAtgttcaaaaacaaaataattcaacTGTTAATGCAGAAAATCAAAccaaagaaaaagaaataataaatttcaaagCGGCTAGTAACATGATTACAAGAGCTGAATCTGTTGGTAGATACTTAAAAGAAGTAGCTAGTTCTTCATTTAAAGATGATTCATCAGACTTAGTATCAGTTTCAAAACTTGTTGACAATGCAACAAACTCTTTGCAATTTAACCATTATTTTCGTCCTTCTAGTGATTTAGCCAATCACATGGAACAGAGCGATGAAGAAGGTTTAGTAGCGTCAGGCAGTGCATCTGAAAGTAATAATTCAGGAACCGAAGAATGCCAAACAAATAATCAGGAACCAAAAAAGAAATCAGCTTACAGTCTTGCCCCAAATAGAGTTTCTTGTCCTTACTGTCAACGAATGTTTCCTTGGTCTAGCTCTCTTCGACGTCATATTTTAACTCATACAGGCCAAAAACCATTCAAGTGTTCACATTGTCCTTTGCTTTTTACCACCAAAAGTAATTGTGATCGTCATTTATTGAGAAAACATGGAAATGTTGAGTCAGCGGTTTCGCTTTATGTACCAATCGAAGATATTCCTGATCCTATACCAACTCCAAAAAGTTGTATTGAAGAACAAGAAACACAAAAATCATTAAATGCCATTCCAAATATTCCACTAAATTTGAATATGCcatcaaatttaaaaacagaaattCCATTGACATCATCAGATTTGCCGTTTAAGTGTCATCTTTGTGATAGTTCCTTTTCAGAACGAATTCAATGTTTGGATCACATAAAAATACATCATTCTCAAGAATTTGCTTTATTACTAGCTAAAGGTGCCATAGATGCTGATGCAGATTTGAATCAAATGAATTCAGCTGAAGATGATGACAATAACAAAATTGATGGTCGTGGTAAATATCCAGATTATGCAAATCGAAAGGTTATATGCGCGTTTTGTATGCGTCGTTTTTGGTCAACAGAAGATTTACGTCGTCATATGCGTACACATTCTGGTGAACGTCCATTTCAATGTGATGTATGTCTAAGAAAATTCACTCTGAAACATAGCATGTTACGTCATATGAAAAAGCATAATGGTTCACATCATAATAATCAATCAAATCAAACAAATAGTGGCTCAGATATATCTGATGATGAACAACCAACAAGTTTAGTTCTTAATAATTCTTTaagaaatcataaaattcaagaaattttaaataaaacagatatatggaaaaataatcaattaaatattgaaCAAAAAGAGAATATTGCAATTCATCATCAGCAACAGCCATTTGtgaaatgtgaaaataaaataaatgaaggTAATAATAACGGTGTATCAGGAGGATTAGGTACTGGAACAGGAAATATAGGAACTTTTAATATTGGCACAACTGGTAATTTAGGAAATCATAATGAAGAAAATACAGATTTAATTGGAAATTTGCTAGGAATTAGTGATCAAGgaatattgaataaattattatcatcagCTGATGAAGCAGCCAAATTACTTGGCgttgaaaaatga
- Protein Sequence
- MMKATTTFQTTATEHHNNKMERRRHSSSSSTSESSIEPITELGRNLKKKNKLISSLSSTKNESTKTLTTSTETVISTTTIPTTNKIKIKSLPLINDSETYESEDNSDGSGHSSNNSSEGDNNTTNNIRYNKRNSNSNRFDRERHMHIELSDNPNSLRKKFRISTPNSKNYNHSSSSNNINNNNNSYSLNNNNNNSPSYTKADTTMVKTTETDSIIMATSVDRTNNESGFVDTSTHNSSHHSSPESIIGNERNDRDDVKYVCPICEVVSATPHEFTNHIRCHNYSSGDSENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQHRKVNSSHGSNGNGNGNNSSSTIGTNVNNIEDSGGIGNPHNSSGTNSSSSSRGNDSGGGGDGESYESDGCSTDSNASSSNNNNNNNNNNSNNNNNNNNNNSNNSNNYNNNNINNNNNNNNNNHYKRKSTDDDNGIIKRRMKTTINNNIIDENETDITNVQHTSIQKYCCPVCNRNDFISMLSLGTHMDREHPGIPAKCRQCEVVFKTHKSLNAHRCLNKVNITQGFKDIDFVDFSSEKFPLIAKSLCEQTIRTSITNQKFECPKCYRAFPCASAVDIHIKDCGELPQDYSLRKRAYSESSEEDNRRDEFFAHLDLQNKSAMSLASTISSPRTSEKSDKADDEKPIQEMSQQYKEERNQYQSPRYQQMFEKQEYHPQLQQQQQHESKDLADIQSILNVTSSNSFLRNFEKCVNTPSSECNYSKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLTAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKTTREEVKRAIIYHPSEDSSCDDPMKKLHLFSSPEFENDEEHPAPKDRSTPVSHLKEMLQSEKPIKIQVKSLEKLIDKNAALFDDHEKNYEDNNQIEINRPMDLSMDVLDLSKKSKALEPVEIKHEQEPTPSEQAKNNIPQLDKNQLIFAQQQLFSETLPKLDPAHFFQLSQIYRNMQLFPHLHPFLLSNSLMPNMNEINKFSPGMLMNPLFVGGSDQQISQLPNNMPTMPSRPQSQPLQSPLVNKPLMESSLQKATQPPPPPPSTQILQKSLTQPHPAPLSTQMTIPHHPQIPRPSSQPPLVPQHQNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWAQRQRSGHHVMRRGHSNSIMPHQITTPQVSQSGTNLAPNTYNTISDQVKYALLAQQLKVRKDTDILQQALAQNNTAILPNNILNTNSNPVQNQDNMNQNNTINIEDDDPKLIIDEKEEEIEDEEEAEDDEVHCEEMKPEDLSKRSSQDENCSTAKKVAESILEQAIKAGSNVQKQNNSTVNAENQTKEKEIINFKAASNMITRAESVGRYLKEVASSSFKDDSSDLVSVSKLVDNATNSLQFNHYFRPSSDLANHMEQSDEEGLVASGSASESNNSGTEECQTNNQEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPIPTPKSCIEEQETQKSLNAIPNIPLNLNMPSNLKTEIPLTSSDLPFKCHLCDSSFSERIQCLDHIKIHHSQEFALLLAKGAIDADADLNQMNSAEDDDNNKIDGRGKYPDYANRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHMKKHNGSHHNNQSNQTNSGSDISDDEQPTSLVLNNSLRNHKIQEILNKTDIWKNNQLNIEQKENIAIHHQQQPFVKCENKINEGNNNGVSGGLGTGTGNIGTFNIGTTGNLGNHNEENTDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -