Aant016639.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020119.1:3602811-3606868[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3 1.4e+02 4.0 2.9 2 19 398 415 397 416 0.94 2 14 0.1 4.9 8.6 3.0 2 23 429 450 428 450 0.88 3 14 0.0082 0.4 12.1 0.1 3 23 459 480 458 480 0.96 4 14 0.00011 0.0055 17.9 0.2 3 23 488 509 487 509 0.94 5 14 0.00049 0.024 15.9 2.5 1 23 516 538 516 538 0.98 6 14 2.4e-05 0.0012 20.1 3.4 1 23 543 565 543 565 0.98 7 14 0.00091 0.044 15.1 1.1 3 23 614 634 612 634 0.98 8 14 0.029 1.4 10.3 0.8 1 23 639 661 639 661 0.97 9 14 0.045 2.2 9.8 0.2 1 23 677 702 677 702 0.95 10 14 0.0034 0.17 13.3 1.3 2 23 711 733 710 733 0.93 11 14 1.5e-05 0.00074 20.7 1.7 1 23 739 762 739 762 0.96 12 14 0.00021 0.01 17.1 0.4 1 23 793 816 793 816 0.94 13 14 0.061 3 9.3 2.3 1 23 822 844 822 844 0.97 14 14 0.023 1.1 10.7 0.3 1 23 878 903 878 903 0.96
Sequence Information
- Coding Sequence
- ATGCCTACGAAATATGGTAGAagtgaaataataaatataaataattgGAAATGTAAACATTGTGATGATCTTATTGATGAACAAACAGATAATTCAATCGAATGCTCAATATGTTGTAGTTGGTACCATGTTGAATGTACCTTGTTGgatagaaaaaaatttatgagcATAGTCAAATCGAATGAAAATTGGTTGTGTCATCAGTGTTTAAATCAGAATTTATCTAAAATTGAATCATTGAAACCATCAACCAGTTCTGTTGCtgttgaaaatgaaaattatttttatgaaagaacaataaattatttcagACTAGATCACGATATTGATGAATCGTCAATTCCAAATATAGAAACTTTCGATCAAAAACTGGATGAATGTGTTCGATGTTCAACAATTTTCTCAGATTCAAATTATCaagaaattttcaatgaaaCAGGAAAAAATCTTGGGCTTCAAAAACTTTTATCACAATGTTTTAATATTGATATTAAGGAGGATACAAATAAATTGCAAGCACTTTGTGATAAATGTGTCAATGAATTAATCGAAGCTTATGATTTAATACAGAGTGAAAACCCTGATGAACAATTAATGCCATTTGATGATTTTGATATTGAACCAGATGATTTTCATAGCGAAGTTGAGGAATCCGATAAAAATTCAACagataatgatgatgatgatggcaatgataatgatgatggcgatgataatgatgatgatgataacggtggtgatgatgatgatacaTGTGATACAGATATCGTCAATGAAGGTACAGTCCTCGATGAGACAGAAGATTCGGATGATAAAACCAAAGTGGAAAAAGTTTCAAATTTGCAATCTAATTGTGATGAAGAAAACATagaatttgaaaatgtttgCTATTTGGATGAATTTGATGAAGAATTTGATTTTAGAGCTTACAAGGAGAAGgcaataaaaaatcataaatttgaTGAAATCTTGTTTCCATCACCGATTGAATGCAAAaTCTGTTTAGAAATATTAGATAATCATGTCAAGATTTTAGAGCACACAAAAGACAcacataatatttataaaaacgATGTATTATTATATCCTTGTGTTGTTGATGAGACATGCACACCATTAAATTCCCTTGAAGATTTATCATTTCATCTAGTTTTCAAGCACTATGATTTAGAAAACTTACTAATACTTACTGAATGTCCTGAATGTAACCagttttttgaaaattttctcaCTTTTAATAAGCATTGTTgtaataaaactaaaaaatatgGACGCAGAGATGTCGAATGTGAACACTGtggaaaaattttcaaatccAATAAAAGATATCGATTTCatttacaatttcatttaGAAAAACGACGACCAAAAGCCTGTTTCGTTTGTGATACAATGTTTCGAGATGAAGATGAATTTTATGAACACATTAAATACGGACATGAAAAAAGTCTTGgaaatatttgtaaaatTTGTGATTTGGTATTTTCAACAGaagaaaatctaaaaaatCATGTTGATAGTTCACACAATAAGGAACATGTTTATTATAACTGTTCTAAATGCATGAAACCATTTTCGACATTACAACACTTAAAACAGCACATGATTGTTCatagtaatttaaaatataaatgtgaaatttGTGGTAAATGTTTAACTAGAAAATCACGTTTAAGTAAACATCTTATTCGGCATCAGAAACCAATAAAAACGGATTTAATGTGCTGTAGTATATGTGGTCTTATAATACATGGTAATGAAGATGTTGAgTTTCATTTACTTACACACAATGATCCTGAGGCTTTCATTGAATGTCAGATACTATCGATTGCTTATGGTTGTGAACACTGTGATCAGGCATATaatacaattgaaaatttattaaatcatAGAAAAACACATCCATCAGATGAATTTGTTTGTACTTTATGCGATGTTAAATATTCTAGATACAGTACAATATCATCACATAGAGCATCACATGCTAGATATATGGAAAAAGTAAATGAATTTCCAGttatgaaatattttgtatgCGGAATTTCgGAATGTAAAAAAGCGTATCCATTATGGACAACTTTGAATTTACACAGAATGAAAAATCATCAATCGCGAAACAGTCTAAGATTAAATTGTCCAAAGTGTAATCTGGATTTTTCTAATAAatttgaatacaaaaatcatttatCGAATAATCATAAAGGAAAACTGATATTTGATTGtcaattttgtaataaatcATTTCGAACAAAATCTGCATTGAAGCTACATGTCCAAAGGGTACATAAagatCGTGAAAAAGAAAACCTTGAGAAGAAACCGaagaaagaaaagaaaattaaaattccaAAAGTAATCTtaccaaaagaaaaaaaatttcaatgtaaagTTTGCGGAAAGTCATATTATAATAGAAGTGATGTAGTTACTCACGAAAAAGCGGTTCATGAGAAAGAAGCAAAATTTTTCTGCACTGAATGTTCATTCAAAACGCCATATAAACAAACACTTGTTTATCACATGCAAActcataaaaatgaatatcCTTATCAATGCTCGATATGTTGTAGATCATttcgttttaaaaattcacataAGTTGCATGAACAAAGACATCAAAATTATAGaaactTTGTATGCAACATTGATGGATGTAATATGTCATATATCAATTTAGGACGATTAAAAACTCATCAGAAGCTTAAACATGGTCCTGAGGCGAAatcaatgaaaacaaaaaagagacGTTATATTGGTTTTGATGCATACACAGATACTTTTGTTGACGATGATGATGGACTTGATGACGGTTACATTGATGAAACACCTACAGTACAAATACAGTCACAaacacaacaacaacaattgCAGTCGCAACAACAAATTTCATTACAATCATCAttagataaaataataaaaatggaaaaaattcAGGAAACTTTCATTGAAGATGAAAGtcaagaaaaaaatcaaatttatgtTGAAGACGAGAATAATTATAATGATGATATtaatgaaatcaaatattatgcatttcaaaatattaaaactacAAATGAAATAGACAGAAAACCGGTACTTATTATACGAAATAATGATTATATATTAGAATTAGATCACACAAAAATTTATGGTAATGCGTTAGAAGTGTCTAATATACAAGAAACTGAAGTTGGAGCTACAGAAATTGTTGGcgaataa
- Protein Sequence
- MPTKYGRSEIININNWKCKHCDDLIDEQTDNSIECSICCSWYHVECTLLDRKKFMSIVKSNENWLCHQCLNQNLSKIESLKPSTSSVAVENENYFYERTINYFRLDHDIDESSIPNIETFDQKLDECVRCSTIFSDSNYQEIFNETGKNLGLQKLLSQCFNIDIKEDTNKLQALCDKCVNELIEAYDLIQSENPDEQLMPFDDFDIEPDDFHSEVEESDKNSTDNDDDDGNDNDDGDDNDDDDNGGDDDDTCDTDIVNEGTVLDETEDSDDKTKVEKVSNLQSNCDEENIEFENVCYLDEFDEEFDFRAYKEKAIKNHKFDEILFPSPIECKICLEILDNHVKILEHTKDTHNIYKNDVLLYPCVVDETCTPLNSLEDLSFHLVFKHYDLENLLILTECPECNQFFENFLTFNKHCCNKTKKYGRRDVECEHCGKIFKSNKRYRFHLQFHLEKRRPKACFVCDTMFRDEDEFYEHIKYGHEKSLGNICKICDLVFSTEENLKNHVDSSHNKEHVYYNCSKCMKPFSTLQHLKQHMIVHSNLKYKCEICGKCLTRKSRLSKHLIRHQKPIKTDLMCCSICGLIIHGNEDVEFHLLTHNDPEAFIECQILSIAYGCEHCDQAYNTIENLLNHRKTHPSDEFVCTLCDVKYSRYSTISSHRASHARYMEKVNEFPVMKYFVCGISECKKAYPLWTTLNLHRMKNHQSRNSLRLNCPKCNLDFSNKFEYKNHLSNNHKGKLIFDCQFCNKSFRTKSALKLHVQRVHKDREKENLEKKPKKEKKIKIPKVILPKEKKFQCKVCGKSYYNRSDVVTHEKAVHEKEAKFFCTECSFKTPYKQTLVYHMQTHKNEYPYQCSICCRSFRFKNSHKLHEQRHQNYRNFVCNIDGCNMSYINLGRLKTHQKLKHGPEAKSMKTKKRRYIGFDAYTDTFVDDDDGLDDGYIDETPTVQIQSQTQQQQLQSQQQISLQSSLDKIIKMEKIQETFIEDESQEKNQIYVEDENNYNDDINEIKYYAFQNIKTTNEIDRKPVLIIRNNDYILELDHTKIYGNALEVSNIQETEVGATEIVGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -