Aant028599.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020124.1:2146002-2149745[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.53 25 6.4 1.0 2 20 33 51 33 53 0.93 2 17 0.01 0.49 11.8 2.8 1 23 74 96 74 96 0.95 3 17 0.37 18 6.9 2.5 1 23 102 125 102 125 0.95 4 17 0.00054 0.026 15.8 0.9 1 23 128 151 128 151 0.97 5 17 2.4 1.1e+02 4.3 0.2 3 19 161 177 159 180 0.82 6 17 0.001 0.049 14.9 1.1 1 23 188 210 188 210 0.98 7 17 0.019 0.92 10.9 2.1 1 23 216 238 216 238 0.98 8 17 0.00074 0.036 15.4 0.4 1 23 244 266 244 266 0.95 9 17 0.021 1 10.8 4.9 1 23 585 608 585 608 0.96 10 17 0.00024 0.012 16.9 0.8 2 23 632 653 631 653 0.96 11 17 1.6 76 4.9 4.7 1 23 661 684 661 684 0.96 12 17 0.00095 0.046 15.0 0.3 2 23 689 711 688 711 0.96 13 17 0.0001 0.005 18.0 0.5 2 21 738 757 738 758 0.93 14 17 3.2e-05 0.0016 19.6 3.4 1 23 766 788 766 788 0.98 15 17 1.2e-05 0.00057 21.0 3.8 1 23 794 816 794 816 0.99 16 17 0.0002 0.0098 17.1 2.2 1 23 822 844 822 844 0.97 17 17 0.0044 0.21 12.9 4.4 1 23 850 872 850 872 0.99
Sequence Information
- Coding Sequence
- atgaataccaaaattaaagaaaatttctttgaTTCTGATGAATCAGATGAAACCGATGAAGAATCACCAagaaaattgataaaaaatgATAACAGACGATGTAGATATTGTGTTAAACTTTTCCGTAGTACTTCACATGTTGCTAAACATGAAATTAAATGTGAAAcagcattaaaaaatacagcTAATATTGTTAAAACGAATGATGGAAATCAACGatttttatgtaatacatGTTTTcgtacatttaaatttttaactgGCCTATTAAAACATCAATTAAGGCATGAGCCACCAGGTGgatataaatgtaaattttgtgATGATAAATATTGTTTAGATTCAGAATTACAAAAGCATGTAGAAATTACACATATGgtTTACAAATGTAGAttatgtaaagaaaaattcaataataaagAATCATATATTGAACATATTCTAATGGTACATAATGGTCGTGATCGTGAATACGTTATTTGTGAAGATTGCGGTTCACAATTTAAAACACGCACAATATTATCATATCATAAACAATCAATGTGTGGTACATcgaaaccatttaaatgtgaacaatgtaattcaaattttcaaaatcaatggtcattaaaaaatcatttattaattCATAATGGTGAAAAGAAATATTGTTGCAGTTATTGtggtaataattttttaaataaaggACAATTGGTTGTACATGAACGGAAACATACAAAAGAGAAACCATTTATATGCAatGTTTGTTCAAAAGCATTTTCATATCGTGAAAGTTTAGTAACACATTCAACAATTCATACTGGTATTAAACCATATTTATGTGAGTGTTGCGGTTCATGTTTCTCATGTTTTGGTAATTTACAAAAGCATCGTCGTAAACGTCCAAATACATGTGGTCAACCGCAATTTAGTAAAAATGCAAAGGCAGCACCACGTGCCagttttaaatCGGGTAAATTAgcaaaaaatgttaaaatacCTAAAGCAACATTGGCATTACCTGATAATCctgataaaaataataaaaatcaatttgaatttgaaatttcgAAATCGCAAGAACAAGATattaaatcaaatcaaaatgAGAACATCCAAATGATACAAATCAATAATGAACAAAACGATAAAATTTCGAATGAAATATCTTTTGAAATTTGTAATACTGTCGATTCTATAAGGCATAATACAGATAGCGAggaaattttagttttattgAAATCCAGTGATGACCAATGCGATAACTCTGAAACCTATACATCGTCTAATAACGTAGAAATATATGAAATTGTTGATACTGAGAATtttgataatgatgatgatgaatataaaaatgatcaCAATTTGTACATCACAACCTTTCAAGAATTATCTGAAATTTCTAAGGATCATAATCTTCCTGATAATGACAAGGAAGAGGAAATTTTCGAGGACTTTGAATTAAAAGATGGAAAAGTCGAAATGATAGAACattatgaattgaatttaatgaaaaataaaagcgTAGAAGAAAcacagaaaattttaaaatatgaaaataaagagAGTAAAGATAATGagaatgatgatgatgatgatgaagataatgtaccattatcaaaaattaaaaataatataattgaagaagaaaaaaataaatcagaatttcaaattaataaaaaaatcaatcaaattgaaaattcatttaaaataaaaaagaaatataaacgaaaaaataatttattacaaataataaaggcaaataatcaaaattttgaatgtaAACAATGTCCAAAAATTTATCATCATCGAAAATCGTACATAAAACATCTTATGAATGATCATAATGTTAATTTAGTTGATGCAGAAAAATCTTTAGATGCTGAATTATCAATTAAAACTGATGAAATAATTCGATGTAAATATTGTggtaaaatttattatcaaatgGCATCATTGAAAAAGCATGAAAAACTTCATGGACATAATGGtaaattaattcataaatGCCCTTGTTgttcaaaatattttgaaacaatacaaaatgttaataaacatacaaaaattgaacattcaaatatattaacatGCGATGTATGTGAGAAACTTTTTACCGGTCCAGATTCATTAAATTCACATCGTAAACGTTTACATCAAAATACCACAtcaacaataacaacaacaacaacaacaataaaatcaTCAGAAATAAcgatgaagaaaaaaattaatgtatgCCAAAAATGtggtaaaaaattttcaaataaaaccGCATTAAATGATCATGAAAGATCAAATTGTGGTAAAAATCcattatataaatgtaaaatatgtaataaatgtTATCGTAGCGCTGGTTCATTAAAAACACATTCAAATATTCATACTGGtgaaattgaatataaatGTACGTATTGTAGTAAATCATTTCGAACGTATGGTCAAGTTAAAATTCATCAGAGAAAACATAATGgcgagaaaccatttaaatgtgatttttgtgataaggcattcgcacatcgtgaaagtctactaacgcatacttcacttcacACTGGCATTaaacgttatacatgttatggctgtgatactagattctcatgcatttcaaatttacaaaatcatcgtaaaactcatcctgagacatgcggattattaccattatctacgaaaccagttacacctatgggctataataatggtattttgtatgttggtacaaaatgtgaccaaactgAATGA
- Protein Sequence
- MNTKIKENFFDSDESDETDEESPRKLIKNDNRRCRYCVKLFRSTSHVAKHEIKCETALKNTANIVKTNDGNQRFLCNTCFRTFKFLTGLLKHQLRHEPPGGYKCKFCDDKYCLDSELQKHVEITHMVYKCRLCKEKFNNKESYIEHILMVHNGRDREYVICEDCGSQFKTRTILSYHKQSMCGTSKPFKCEQCNSNFQNQWSLKNHLLIHNGEKKYCCSYCGNNFLNKGQLVVHERKHTKEKPFICNVCSKAFSYRESLVTHSTIHTGIKPYLCECCGSCFSCFGNLQKHRRKRPNTCGQPQFSKNAKAAPRASFKSGKLAKNVKIPKATLALPDNPDKNNKNQFEFEISKSQEQDIKSNQNENIQMIQINNEQNDKISNEISFEICNTVDSIRHNTDSEEILVLLKSSDDQCDNSETYTSSNNVEIYEIVDTENFDNDDDEYKNDHNLYITTFQELSEISKDHNLPDNDKEEEIFEDFELKDGKVEMIEHYELNLMKNKSVEETQKILKYENKESKDNENDDDDDEDNVPLSKIKNNIIEEEKNKSEFQINKKINQIENSFKIKKKYKRKNNLLQIIKANNQNFECKQCPKIYHHRKSYIKHLMNDHNVNLVDAEKSLDAELSIKTDEIIRCKYCGKIYYQMASLKKHEKLHGHNGKLIHKCPCCSKYFETIQNVNKHTKIEHSNILTCDVCEKLFTGPDSLNSHRKRLHQNTTSTITTTTTTIKSSEITMKKKINVCQKCGKKFSNKTALNDHERSNCGKNPLYKCKICNKCYRSAGSLKTHSNIHTGEIEYKCTYCSKSFRTYGQVKIHQRKHNGEKPFKCDFCDKAFAHRESLLTHTSLHTGIKRYTCYGCDTRFSCISNLQNHRKTHPETCGLLPLSTKPVTPMGYNNGILYVGTKCDQTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -