Aant016141.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020118.1:34021745-34023977[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.04 1.9 9.9 0.2 3 22 211 230 211 230 0.93 2 12 0.00024 0.012 16.9 1.4 2 23 255 277 254 277 0.96 3 12 0.66 32 6.1 0.4 1 20 334 353 334 355 0.87 4 12 3.9e-05 0.0019 19.4 0.8 3 23 365 385 363 385 0.96 5 12 1.1e-05 0.00051 21.2 0.5 1 23 388 411 388 411 0.96 6 12 2.4e-07 1.1e-05 26.4 0.9 2 23 418 439 417 439 0.98 7 12 2.2e-06 0.00011 23.3 1.0 1 23 445 467 445 467 0.95 8 12 2.8e-06 0.00014 23.0 1.2 1 23 473 495 473 495 0.99 9 12 4.7e-06 0.00023 22.3 1.5 1 23 501 523 501 523 0.98 10 12 0.013 0.65 11.4 0.1 1 23 529 551 529 551 0.98 11 12 5.5e-05 0.0027 18.9 5.7 1 23 557 579 557 579 0.98 12 12 0.00024 0.012 16.9 0.7 1 23 585 608 585 608 0.98
Sequence Information
- Coding Sequence
- atgagTTTATCTGTTGATAATATGTGTAGAACATGTTTATCATCCGGTGgaaatttaatatcaatattTGATGGAAAAACTGTTTCAACTGAAACATCATCATTAGCTAATATGATAAAAGCAGTAACTTCTGTACAGATATCATTCTCTGATGGCTTAccaaacaaaatttgtttactTTGTGTTTCTGAAGTAAATCGTGCATATTCATTTCGTATTAAATGCGAAAATTCTGATTTAACATTAAAACAGTTTATTAATGAACAAATGATAATGCAAAATATTGctgaagaaaatgaaaatgaaattaatttaaaaaattcagaaaataagAAATCATTACAAGCTGTTAATGAAATTACATTTTCTAATACTGACGAAATTTCTGATATTGAAAAAGCAAATAATGATGATCAACTGTCTATATTATTAGATGATCAAGAAAATTGTGATCAAACAGATGATATTGACCGTGAATCAGATGATCCAGAAATTGAATGTACAGAAGgaaatgataatgatgatttAATTGAACAAACTGATGAACATAATATAATGAATGCAGATGAAAGTCAGTGTAAAAATGATGCAAATAATGATAAAGAAGAAGATGAAACTGTAATATTAGGTTGTGCTGATTGTAATCgaacatttgaaaatttcgaGGAATTTGAGGCACATTCTAAAACATGTACAAAAGACACAGATAATAATGCTAATAATActcaacaaaaaaataaaataaataaaaagtcGCCAATAAAATGTCCATATTGTCCATTCGATTTTGTTCATCAAAAGAATCTAGATAAGCATGTGAATAAATATcatattaagaaaaatattacaaattcAGATCAATTACAATCAATCATTAGAGAAGATGATAAACAAAATGTTGCGACAACAGACTCACAGGACTATACAGAGACAGAATGTATAATTCAAGAAGTTGATGTTATCGACTTGAAACATAAtcaacaaattttaaatactccatacaaatgttttaattGTGGTGCTGGTTTCGctaaagaaaaatcattaagttttcatttgaaattgaataaatgTACTGAAGAGCAATTCGGATGTGTTTCGTGTAAGAAAGTTTTTATTAATAAGAAAAGTCTTATTGAGCATATGAGAACGCATACAACATttgaatgttcaaaatgttcaaaaatattttcacaaCAAGATAAACTTAAGGAGCACATAGAAATTGAACATTGTACCGATAAAAAGAATCAATGTCCCTACTGTAGTAAAGTTTTTACAATGCAATCAAGTTTAAAGGATCATATAAGGACGCATAATGGAGAAAAGCCGTTTTTGTGTTCATTATGTGGCAAAGCTTTCACTCAAAGTACAAATCTTAAACAGCATGTTATGAGACATACTCAAACGAAACCTTTTAAATGTGATCAATGtgatttttcatttgttaGTAAAGGCGAATTGAATTCACATTTACGTAGGCATACTGGTGATCATCCATTTGTATGTGATACATGTGGTTCTAGTTTTACAACATCAAGTTCATTAGTAAAACATAAACGTAGACATACAGGTGAACGTCCGTATGCTTGTGAATATTGTCCAATGAGATTTGCAGCATTaggaattttaaaaaatcatcGACGAACACATACTGGTGAAAAGCCATTTATCTGTAAATATTGCAATCGTTCATTTACACAAAAAAGTGATTGTATGTCACATATGCGTACGCATACTGGTGAAAGGCCTTATATTTGTACAATATGTGAATCAAGTTTTCAAAAGTCTAATGCATTGAGGACTCACATGAAAacagttcataaaatgattcatacaaaaaatgaaaataaacgACAGCAACAATCGCGGCGACTGTTACAACgacaacagcaacaacaacaagagAAAGGACAACAAATTCAACAAATAAATCAACAGGAAGAAGATCAACAAAAACTTGATTCTGATGTACTTGTTGATATATTAGGAATGGAAGTTGATAATAACgatatacaaaattttgataatCCTGATGAATTACAAgatgaaattttacaaaaatga
- Protein Sequence
- MSLSVDNMCRTCLSSGGNLISIFDGKTVSTETSSLANMIKAVTSVQISFSDGLPNKICLLCVSEVNRAYSFRIKCENSDLTLKQFINEQMIMQNIAEENENEINLKNSENKKSLQAVNEITFSNTDEISDIEKANNDDQLSILLDDQENCDQTDDIDRESDDPEIECTEGNDNDDLIEQTDEHNIMNADESQCKNDANNDKEEDETVILGCADCNRTFENFEEFEAHSKTCTKDTDNNANNTQQKNKINKKSPIKCPYCPFDFVHQKNLDKHVNKYHIKKNITNSDQLQSIIREDDKQNVATTDSQDYTETECIIQEVDVIDLKHNQQILNTPYKCFNCGAGFAKEKSLSFHLKLNKCTEEQFGCVSCKKVFINKKSLIEHMRTHTTFECSKCSKIFSQQDKLKEHIEIEHCTDKKNQCPYCSKVFTMQSSLKDHIRTHNGEKPFLCSLCGKAFTQSTNLKQHVMRHTQTKPFKCDQCDFSFVSKGELNSHLRRHTGDHPFVCDTCGSSFTTSSSLVKHKRRHTGERPYACEYCPMRFAALGILKNHRRTHTGEKPFICKYCNRSFTQKSDCMSHMRTHTGERPYICTICESSFQKSNALRTHMKTVHKMIHTKNENKRQQQSRRLLQRQQQQQQEKGQQIQQINQQEEDQQKLDSDVLVDILGMEVDNNDIQNFDNPDELQDEILQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -