Aant003194.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020117.1:324188-326170[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.063 3 9.3 2.0 2 23 165 186 164 186 0.91 2 14 0.0098 0.47 11.8 2.1 1 23 192 215 192 215 0.88 3 14 0.083 4 8.9 1.6 1 20 221 240 221 243 0.83 4 14 0.00016 0.0077 17.5 1.1 1 23 249 272 249 272 0.98 5 14 0.00049 0.024 15.9 7.7 1 23 278 300 278 300 0.98 6 14 0.0031 0.15 13.4 3.9 1 23 306 328 306 328 0.97 7 14 9.6e-06 0.00047 21.3 3.3 1 23 334 356 334 356 0.98 8 14 0.055 2.6 9.5 0.3 1 10 362 371 362 384 0.77 9 14 2e-06 9.4e-05 23.5 2.0 1 23 390 412 390 412 0.99 10 14 0.00071 0.034 15.4 1.5 1 23 418 440 418 440 0.97 11 14 9.4e-05 0.0045 18.2 3.8 1 23 446 469 446 469 0.98 12 14 3.5e-07 1.7e-05 25.8 0.4 1 23 475 497 475 497 0.99 13 14 2.2e-05 0.0011 20.2 0.3 1 23 503 525 503 525 0.98 14 14 1.2e-06 6e-05 24.1 0.9 1 23 531 553 531 553 0.99
Sequence Information
- Coding Sequence
- ATGAGTTTAgaaatgtataaaattgatACAGTATCATCAGACATTGGATATTTAGATTCACCTGAAGaCTTTGATCATCTTGAAGACCAAGAAAAAGAAAGTTCTATTGAATTTATGGATTCACTTGGAAATGAAGCTGGCGAATCAATGAACAAATTAGTAGTTTCAAATAATTCTGAAGAAAATctagaaaataatattaaaaaagaaataattgaACCTAAAAGCAACGATTATGAAGTGCATTCGACTGGCgaattaataatttcaaataattcaGAGGAAAATctagaaaataatattaaaaaagaaataattgaACCTAAAAGCAACGATTATGAAGTGCATTCGACTGGCGAATTAgtaatttcaaataattctGAGGAAAATctagaaaataatattaaaaaagaaataattgaATCTACAAGCAACGACTATGAAGTGCATTCGATTGAATCTGTAATAAAGGTTAATAACGATGATCCGTTAAAATGTAGTTTTTGTGATCGTCGTTTTCgaaatagacaaaaaaaaattgatcaTGAAAACGGTCATACAGGTGAAAAGCCGTATAAATGTGATATTTGTAATAAGAGTTTCCAAACAAAGGGTGGATGTAATGATCATAACAAAATTGCACATTCTAAAGActtatattttacatgtagTATTTGTGATCGTCGTTTTCAgagtaaacaaaaaaagattGATCATGAGTTTGGTCATAAAGGCGAAAAACCGTATGAATGTGGTATTTGccataaaaattttcaaacgAAAGGTGGATATAACGATCATTACAGAATTGCTCACTCTGAAGATTTACAATTTACTTGTAGTATTTGTcataaaagatttaaaaaaaagttgaGTTTAACAAACCACATTCATCgtcataaaaataaagttaaacacaaatgtacatattgtgaaaaatcgttttatcaaaaatttgataaaGTTGTACATGAACGTATTCACACTGGTGAAAAACCATatcaatgtaaattttgtggtaaaagatttaataaaatgtcGAGTTTAACTAAACATGAACGTCTTCATACTGATGAAAAGCCGTACCAATGTAAAATTTGTGGTAAAGAGTTTCTttcaataaattcaatatCTGTGCATAACAAATTACACAGAGATAAAAAGTTATATAAATGCAAAACATGTGGActagaatttaaaatttcatcgaatttaaatacacatatgaaaCGTCATATGAACGAAAAAGACTATAAATGCGATTATTGTGATAGAATGTTTATTACAAAAGCTGAAAAATATGAACATGAACGTTATCACACTGGTGAACGTCCATTCCAATGTACCAGTTGTGGTGAATGTTTTATTACAAGTAGTAGATTAACAATTCATACTAGAAAAAAACACACAAATTTCAGACCATTCAAATGTTCTGAATGTGATAAAAGTTTTGCGTCAAGAGCAGATTTGAAAGATCATTTAATAACACATTCAGATGCCAGACCATTCGAATGTGTTACATGTAACGCAACATTTGCAAGACAGAAAGCATTAAGGGCAcatcaaaaaattcattcGAATGTTACCGCATACGTTTGTAGAATATGTAAAAAAGGTTTTAAACAAAGTGCTGGATTGTATAATCATATGAGAACTCATGGAGAAATAATGTGA
- Protein Sequence
- MSLEMYKIDTVSSDIGYLDSPEDFDHLEDQEKESSIEFMDSLGNEAGESMNKLVVSNNSEENLENNIKKEIIEPKSNDYEVHSTGELIISNNSEENLENNIKKEIIEPKSNDYEVHSTGELVISNNSEENLENNIKKEIIESTSNDYEVHSIESVIKVNNDDPLKCSFCDRRFRNRQKKIDHENGHTGEKPYKCDICNKSFQTKGGCNDHNKIAHSKDLYFTCSICDRRFQSKQKKIDHEFGHKGEKPYECGICHKNFQTKGGYNDHYRIAHSEDLQFTCSICHKRFKKKLSLTNHIHRHKNKVKHKCTYCEKSFYQKFDKVVHERIHTGEKPYQCKFCGKRFNKMSSLTKHERLHTDEKPYQCKICGKEFLSINSISVHNKLHRDKKLYKCKTCGLEFKISSNLNTHMKRHMNEKDYKCDYCDRMFITKAEKYEHERYHTGERPFQCTSCGECFITSSRLTIHTRKKHTNFRPFKCSECDKSFASRADLKDHLITHSDARPFECVTCNATFARQKALRAHQKIHSNVTAYVCRICKKGFKQSAGLYNHMRTHGEIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -