Aant028104.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- zfh1
- Assembly
- GCA_963971155.1
- Location
- OZ020123.1:18245559-18248994[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1.5e-05 0.00073 20.7 2.1 1 23 165 187 165 187 0.98 2 23 6.3e-05 0.003 18.7 2.9 1 22 192 213 192 213 0.97 3 23 2.4e-05 0.0012 20.0 1.2 2 23 249 270 248 270 0.97 4 23 0.00039 0.019 16.2 3.0 1 22 276 297 276 297 0.97 5 23 0.0011 0.053 14.8 0.9 2 23 335 356 334 356 0.95 6 23 0.0012 0.059 14.7 1.1 1 21 362 382 362 383 0.95 7 23 0.002 0.097 14.0 3.1 1 23 413 435 413 435 0.98 8 23 8.3e-06 0.0004 21.5 1.0 1 23 441 464 441 464 0.96 9 23 0.024 1.1 10.6 0.9 2 23 473 494 472 494 0.95 10 23 0.00023 0.011 17.0 0.5 1 21 500 520 500 521 0.95 11 23 0.00014 0.0068 17.6 1.0 2 23 538 559 538 559 0.96 12 23 0.033 1.6 10.2 0.9 1 21 565 585 565 586 0.96 13 23 0.34 16 7.0 1.7 2 23 619 640 618 640 0.96 14 23 0.0002 0.0099 17.1 0.4 1 22 646 667 646 667 0.96 15 23 5.5e-05 0.0026 18.9 0.7 2 23 684 705 683 705 0.96 16 23 0.017 0.8 11.1 0.8 1 21 711 731 711 732 0.95 17 23 0.0069 0.33 12.3 0.4 2 23 768 789 767 789 0.95 18 23 0.037 1.8 10.0 1.0 1 21 795 815 795 816 0.95 19 23 0.019 0.93 10.9 0.3 2 23 840 861 839 861 0.95 20 23 0.2 9.7 7.7 0.6 1 19 867 885 867 885 0.97 21 23 0.002 0.097 14.0 3.1 1 23 918 940 918 940 0.98 22 23 0.0062 0.3 12.5 5.0 1 20 946 965 946 967 0.95 23 23 0.0013 0.063 14.6 4.2 1 23 978 1000 978 1000 0.97
Sequence Information
- Coding Sequence
- ATGGATGAAATTGTTGTATGTCATAATTTAGCCCAAATTAAGGCTGCATCATCAAATTTAACGGAAATAGTATACATTGGAACACAAACTTTCACCATAACACATCTAGATGATAATGAAACGAAAAATGTTGATACCGTGGAGAATAATCAACGAAATGATGTAAATAAAGAACAATCATTAATTGAAAATCAATCTGCAATCAATAATTGTTCAAATGAAAGTGATAACGAATCAGAAACGTCTTTAGTATCAGTGTACCGTTTCTCAGAATTATCAGATAATGATAACAATATAGACTCAGgattttcaaatacaaactcagaatcattatcatcattatcgttatcaacaaaaaaaaaattgaaatcttCTGTAAATTCCAGATCACCAAAGAAAATCGCCAAAGAATTTTTAGAAGAAACGATGCAATCAAAAACTTCATCAGAGAATTATGTACACAAAGAAGAATTACTACCAACAATATATCGttttaaatgtgaaatttGTAGTAAAGCATTTTATACTAAGCAAAAATTAAGACGTCATTTAAGCATTCATAGtgaaaaaatgtatgaatgtGACAAATGTAATCGTAAATATTCACGACTTGATCATTTAAATCGTCATAAAAGGACGGTAAATTGTAAATCACTTAAAACAGTTATAATGGAAactatattaaataaaagtataaaaaataatcagATTGATAAAAAAGATCAAATATCAACAAAGAATGTTAAATGTAcaatttgtaataaaatatttaaagataaatacaaattaaaattgcATCTTGTTACTCATACCGGTGAAAGACcatataaatgtgaaaaatgtCATTCTAGTTTTACACAAATTAGCAGTTTAAAGCAACATCAAAAAACTAAAGTATGTGAAACATTTGTTAAAGTTAATAAATTACCACTCGAATCAAAATCATTTTCAGatgatataaaatatcaatttgTTAGAAATAAAGCAGCATTACATGGTAAAGAATGCCgtatttgtaataaaatgtttaGTAATGAATTTATGTTACAACAACATTTCATTATTCATGTTGGTGAAAAACCATTTGTATGTGATAAATGTAATACAGGATTTTCACATTTGGTTTCATTAACTCGCCATAAAAAACTTTTAAGATGCAAAACAATTAATATACCAAAGATAAATGATATAAAACGTTATCGAAGCactaagaaaaaaatattaaattcgTATAGTTTCAAATGTCGATTTTGTAATAAAGGATTTCgttatgaatttttattaaaacagCATCTTAATGAGcatattgataataatttatataattgtGAAGAATGTAATCGTACATTTACAAATTGGATTAATTTGAATGAACATAAAAGAAATACACATTCTAGAGTAAATAAAGTAGTTCAAAAATGTCGAatttgtaatgaaattttcaaaactaTATTCTCATTACAAGATCATTTTACTATTCATGTTGGGGAAAAACCatataaatgtgaaaattGTGATATGGAATTTTCATATCCTGCTACATTAAATCGTCATAAAAAACGATCAAAATGTAAACCAGTTGGTCCAGAAAATAAAGTATTAAATGGTCCGAAATGTCGAATTTGTAATGTAATGTTTAGTAATTATTCAAACTTAAGAAgacattttattattcatgGTGGTGAAAAACCATATAAATGTGATAATTGTAATGTcgaatttgattttcttggTACTTTTAAACGACATAAAAGAGAATTAAAATGTAAACCAGTTGATACTGAAAAATTATCTACATTATTATATACtaaattaaatcaaatgaGGACACATAAATCATCtttgtatgttaaaaaatgTCGAATTTGTAATGAAATGTGTGATAATGAATTAATGTTACAGAgacattttattattcatgATGGTGAAAAACCatataaatgtgaaaattGTGATGTGGAATTTTCATATCCTGGTACATTAAATCGTCATAAAAGACGATTAATGTGTAAACCAGTTGATACAGTAAATAAAGTattaaatgatataaaatgtCGAATTTGTaatgaaatgtttaataattATTCAAACTTACAAAGACATTTTATTGTTCATGTTGGTGAAAAACCATATAAATGTGATAATTGTAATGTCGAATTTGATGTTCGTAGTAGTTTTGTTCGACATAAAAAAAGATCAACATGTAAACTAGTTGATACTAAAAAATTACCTAcatcaaaaaattcattatatacTAAATCAGATCGAATGATGACAAATAAATCATctttaaatattaaaacatGTCGAATTTGTAATGAAATGTTTATTAAAGATTCAGCATTACAAAgacattttattattcatgATGGTGAAAAACCATATAAATGTGATAATTGTAATGTCGAATTTGATCTTCGTAGTAGTTTTGTTCGACATAAAAAAAGATCAACATGTAAACCAGTTGATACCGAAAAATTACCTTCatcaaaaaaattcatacatttttatactaaAGAATGTCGAATTTGTAATGAAATGTTTAGTAGTGATTTAGCGTTACAAAGACATTTTCTTATTCATGATGGTGAAAAACCATATAAATGCGATAAATGTAATGTGCAATTTACGTGGTATTCTTCACTAATTCGTCATgacaaattacaaaaatgtaaaCCATCTGATACAAAGAAAGCAGATAGTATAAAATGTTATCGAAGCactaagaaaaaaatattaaattcgTATAGTTTTAAATGTCGATTCTGTAATAAAGGATTTCgttatgaatttttattaaaacagCATCTTAACGAACatattgataataattcatataaatgTGAGAAATGTAATTGtagatttaaaaattcaattcatttgAATAATCATAAATCACTAGAATATTGTATATCGTCTGATACAACATCATTTAGTTGTCTTAAATGTaataaagtatttaaaaataatttttgtttaatacTGCATCAACAATTACATTGTGATAATGGAAGTAATAGTCATTTGCTTAATTCACCATCACTTTTATTACGTGATAATAAGGcatatttaaatcaaaatgataatgataatgataacGATGAAGATTATGTAAGAAATTATCCTAGTTCAATAACAGTTtcaaaaatagaaattaaaaatgaaaatgatgaagattttgtaaaaaattatcCTAATTCAATAACAGTTTCagaaatagaaattaaaaatgataatgatgaagATTTTGTAAGAAATTATCCTAATTCAATAACAGTTTCagaaatagaaattaaaaatgataatgatgataataataaaaattgtacaagTGCTGTAGATTTTATAGCAAAATTATTTGATGATAATTAg
- Protein Sequence
- MDEIVVCHNLAQIKAASSNLTEIVYIGTQTFTITHLDDNETKNVDTVENNQRNDVNKEQSLIENQSAINNCSNESDNESETSLVSVYRFSELSDNDNNIDSGFSNTNSESLSSLSLSTKKKLKSSVNSRSPKKIAKEFLEETMQSKTSSENYVHKEELLPTIYRFKCEICSKAFYTKQKLRRHLSIHSEKMYECDKCNRKYSRLDHLNRHKRTVNCKSLKTVIMETILNKSIKNNQIDKKDQISTKNVKCTICNKIFKDKYKLKLHLVTHTGERPYKCEKCHSSFTQISSLKQHQKTKVCETFVKVNKLPLESKSFSDDIKYQFVRNKAALHGKECRICNKMFSNEFMLQQHFIIHVGEKPFVCDKCNTGFSHLVSLTRHKKLLRCKTINIPKINDIKRYRSTKKKILNSYSFKCRFCNKGFRYEFLLKQHLNEHIDNNLYNCEECNRTFTNWINLNEHKRNTHSRVNKVVQKCRICNEIFKTIFSLQDHFTIHVGEKPYKCENCDMEFSYPATLNRHKKRSKCKPVGPENKVLNGPKCRICNVMFSNYSNLRRHFIIHGGEKPYKCDNCNVEFDFLGTFKRHKRELKCKPVDTEKLSTLLYTKLNQMRTHKSSLYVKKCRICNEMCDNELMLQRHFIIHDGEKPYKCENCDVEFSYPGTLNRHKRRLMCKPVDTVNKVLNDIKCRICNEMFNNYSNLQRHFIVHVGEKPYKCDNCNVEFDVRSSFVRHKKRSTCKLVDTKKLPTSKNSLYTKSDRMMTNKSSLNIKTCRICNEMFIKDSALQRHFIIHDGEKPYKCDNCNVEFDLRSSFVRHKKRSTCKPVDTEKLPSSKKFIHFYTKECRICNEMFSSDLALQRHFLIHDGEKPYKCDKCNVQFTWYSSLIRHDKLQKCKPSDTKKADSIKCYRSTKKKILNSYSFKCRFCNKGFRYEFLLKQHLNEHIDNNSYKCEKCNCRFKNSIHLNNHKSLEYCISSDTTSFSCLKCNKVFKNNFCLILHQQLHCDNGSNSHLLNSPSLLLRDNKAYLNQNDNDNDNDEDYVRNYPSSITVSKIEIKNENDEDFVKNYPNSITVSEIEIKNDNDEDFVRNYPNSITVSEIEIKNDNDDNNKNCTSAVDFIAKLFDDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -