Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963971155.1
Location
OZ020117.1:19200029-19210469[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2e-16 1.7e-12 47.7 0.1 1 45 335 380 335 380 0.95
2 2 9.4e-19 3.1e-15 56.4 0.0 1 43 776 819 776 821 0.95

Sequence Information

Coding Sequence
ATGGGACGCAGGAAATGGAAGCTCTATCAAGAAGTTCTTGCACGATCCCAATTGAATGTAAACATCGTGAGTTCAACTCAAAATATTTCTGCAAgccagaacaaaaaaacaaactcCTTGCAGCAACCAGAAAAAGAGAATCTAATTTTAGATCAACAAAACATAGACCAAAGTTATTCGAAAGGAAGCGAAATCTTTGCTATAAAGAAAGATATAGGAGAAAATTTAAACGAAGAAAATTGTACAACATTGAAGAAAgAAAAACTGGAAGAAAGGTTAACAGAAAGTCTTGCAAGTAATCTGAAAACACCAACAACAAACACGacaaatattacaataaaGCCCTCAGAATCAACAAGCACGTCTTCATTGCTATCTACATCAATTGATTGGAAGCCAGACGAAAAGTGTTACTTTTGTGTTGACGGTAAACTTCTCACAGTGAACGAGAAAGGAGAATTGGTGGCCGAATCTGGCCCGGCACAGTCCGAGGCAGAATTGGCCCGTACAaCATCTGTTGATTCCGATAGTGATTCAAGTGATAGTTCACCAGATCTTGAATTACGTAATCAATCTACATCGGCAGCAATAGCTGCAGTAGAAGCAGCAAGACGCGTAACAAATGTGCATAAAACATTAACATCACGTTTAAGAGATTCACTTCCCTCGAATATGACCTCATTTGAATCAATGGGTGCCCAAATGGCTGCCGTTGCTTCAATTCAAGGACTTCAGTCTGgtttaaatacatattatcaAGGCATTTGGTACCACCAATTAGCACAGCAACTAATGTCGGCCACCACAACTACCTCATCAGAAACACCTATTGCCGAAAGTAGTCCTTCAATTAAAGATTCTCCTAGTCCAACTGATGCAGTCGGTGAACAACCATTAGATCTTAGCGCAAAACCATCACCAAATTCTTCAGCTAGTGGAGatcaaaaacaaattttcagAGCGAAACCACGAACGACAACCATATCTGGTCGTAGAACATATACAGAAGAGGAATTACATAGTGCATTACAAGATATTATTAGTGGAAAATTAGGTACGCGTCGTGCTGCTGTTTTATATGGTATTCCTCGATCAACGTTACGAAATAAAGTTTATAAAATTGCAATGGAACAAAAACGTGAAACATCTGTGTTACATCAGCCAACACTTGATGAATTAGTTGATGCAGATGATGAAGATAAAGATCTCTCAGGTGATGATGAAAAAGATGATAAATTGATTGGAAGTTCCTTTAAAACGCAATCAGATGATCTTGCCCAATTAGAATTAACATCACAATTAGCCGCAGCCGCTGTTCAAAAACTAAGCGAAACCATTAAAGCTGTCGATGTTAAACCATCAACATCACTAGATGCTCAAACGAAAATTCAACCGAGTATTTCAACACAACAGCAACAACCACCACCACCGCAAACATCACCATTAACACCAAATCCCTGGCTTGATCCAAATGTTTTATTTCAAAGTTTATTACTAACTGGTGGTTTAAGTGGAATGCCAGGTTTAATACAACCAAAAGTTGAAGATCCTGCAGCTTTTAGAGAAGTACTTAGTAAGTTATTGCTACAACAAGAGGAATTGATCATGAAAGAACACATGAAAAACACTGCAACAATGACCAGTGATTTATTGAATAATAGTAAAACAACAGCATTAGATCCacgtattttattacaaaatttgcCAGGATTACAGCAACATCAACAGTCACAACATTCAGCCCATCATGGTTTTCAAAGTCGTTTACCAAAGTCTGATACACCAGAAACAGCTTCATCTGTTGACATAAGTGAAGTAAGTGATGATCCCTCGGTCATACTAAAAATTCCGTCCTATAAACCTGTCGCTGGGTCTTCATCATCAGgaaaaaatgaagaaaatttgAGTTCGCCAGCTTCTCAAGTAACTCCACCAATATTATCACGAAGCCCGCAACAACCGAATAATTTACCCGGAATATCTCCACCATTAATACGACAAAATAGTGAATCACAGTCTCCTCCAATTATGTGCTTGAGAGATGTTATTGCAAATAGTCTAAGTCGAACATTTAACCAACAAACTAATAATGAGTCACACGCGAGTGCATTAAAAAGTGCATCATCTTTGGAACCCAGTGAACAGTTTAAGCGTGCGAGTATTTCGGTAATCAAAAATATTGGAGGAACAGATATATCTCGATTTGCGGCTACACCAAATATCCTCGCTaataatgttaataataattctCCAGGAGGATCTAATAATTGTAACAATGCGGGTGGAAAAGGAACAAGACCAAAGCGGGGTAAATATAGAAATTATGATCGCGATAGTTTAGTTGAAGCTGTTAAAGCTGTTCAAAGAGGCGAAATGTCTGTTCACAGAGCGGGAAGTTATTACGGTGTACCTCATTCTACTCTAGAATATAAAGTAAAAGAAAGGCATTTAATGCGACCGCGAAAACGGGAGCCTAAACCACAACCTCTGGATGATCGAACGGGTAGTTCCAGTAATAGTTCCACAAACTTAAAGAACACAAACATTCCAAGTATGAGTGCAGTTagtaatttagaaaaaatgaaGACATCGACGACTACTCAAAAGCCGTCGTCTATTAAAAATAACCCACCATTTCCAAGTACGTCGCCGAATGGTATGAAAGTGCCGATATTTGATCCGGCAATGGCTGCTCAATTCCAATATGCACCGCATTTGTTTTGGCCACATTCCACTGGTTTTGGAGCACTACCGATAGATTTTCAGAGAACTACAAGTGGAGCTGGAGCTACGCCAGCATTCCCATCAAATCCTGAAAGTTTTCTAGCATCACAAATGATGCAAAGATTTCATGAAGAATCAAGTCGATTAGCAGGCAATAATTTAGGCATAACAAGTACAACAACAGCCACATCTAGCTCAGTTACAAATTGTAAACCAACTAATTCTGGCACAAATTCAAGTATTAAAAATACACGTCAAATGGCCGAAAGCTTATACGATACGGGCGGAGCAAATGGTTCATTTTTGGATGGTATAATACGACAAACATTAGATCGAAAAACTACTGACATATCACACGGTGCACTTCTTGATCAGttagttaaaaacaaaaggcCGCCAATACTAAGTAGCAGTTTAGAACAGCAATTATCAACTAATCAAACGAAGACCAAACGATGTGGTAGTCCATTACATTATCCAGTGATGGAAATAAAACGAGAAAGATCGAGCCCTGCAACAATAGTATCTAGTGACGTTGAACGAAATTCTGTTGAACGTGACATATCAAAAGAATCAGCAGagaatacaataaaaattaatgaagGAATGATATTGAAAACTGAAGATAAACAACATCAACAGCAACAGCTACAAATTCAACATCATCATACTGCAGCGCTTCATCTGTtacaacagcaacaacagcagttacaacaacaacaacaattatcGGGTAATAGTATACGACATTTATCCATTGAGGATCTTAACGGTGGGGGCAGTAGTGGAAGTATTCATGATAAATtaggacaaattaaaacagaaGCTGAAGACAGTTTATAG
Protein Sequence
MGRRKWKLYQEVLARSQLNVNIVSSTQNISASQNKKTNSLQQPEKENLILDQQNIDQSYSKGSEIFAIKKDIGENLNEENCTTLKKEKLEERLTESLASNLKTPTTNTTNITIKPSESTSTSSLLSTSIDWKPDEKCYFCVDGKLLTVNEKGELVAESGPAQSEAELARTTSVDSDSDSSDSSPDLELRNQSTSAAIAAVEAARRVTNVHKTLTSRLRDSLPSNMTSFESMGAQMAAVASIQGLQSGLNTYYQGIWYHQLAQQLMSATTTTSSETPIAESSPSIKDSPSPTDAVGEQPLDLSAKPSPNSSASGDQKQIFRAKPRTTTISGRRTYTEEELHSALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKIAMEQKRETSVLHQPTLDELVDADDEDKDLSGDDEKDDKLIGSSFKTQSDDLAQLELTSQLAAAAVQKLSETIKAVDVKPSTSLDAQTKIQPSISTQQQQPPPPQTSPLTPNPWLDPNVLFQSLLLTGGLSGMPGLIQPKVEDPAAFREVLSKLLLQQEELIMKEHMKNTATMTSDLLNNSKTTALDPRILLQNLPGLQQHQQSQHSAHHGFQSRLPKSDTPETASSVDISEVSDDPSVILKIPSYKPVAGSSSSGKNEENLSSPASQVTPPILSRSPQQPNNLPGISPPLIRQNSESQSPPIMCLRDVIANSLSRTFNQQTNNESHASALKSASSLEPSEQFKRASISVIKNIGGTDISRFAATPNILANNVNNNSPGGSNNCNNAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDRTGSSSNSSTNLKNTNIPSMSAVSNLEKMKTSTTTQKPSSIKNNPPFPSTSPNGMKVPIFDPAMAAQFQYAPHLFWPHSTGFGALPIDFQRTTSGAGATPAFPSNPESFLASQMMQRFHEESSRLAGNNLGITSTTTATSSSVTNCKPTNSGTNSSIKNTRQMAESLYDTGGANGSFLDGIIRQTLDRKTTDISHGALLDQLVKNKRPPILSSSLEQQLSTNQTKTKRCGSPLHYPVMEIKRERSSPATIVSSDVERNSVERDISKESAENTIKINEGMILKTEDKQHQQQQLQIQHHHTAALHLLQQQQQQLQQQQQLSGNSIRHLSIEDLNGGGSSGSIHDKLGQIKTEAEDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-