Aant012472.1
Basic Information
- Insect
- Anthrax anthrax
- Gene Symbol
- -
- Assembly
- GCA_963971155.1
- Location
- OZ020117.1:62847127-62848688[+]
Transcription Factor Domain
- TF Family
- HSF
- Domain
- HSF_DNA-bind domain
- PFAM
- PF00447
- TF Group
- Helix-turn-helix
- Description
- Heat shock factor (HSF) is a transcriptional activator of heat shock genes [1, 4]: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs [1]. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus [2]. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats [3]. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear [2]. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus [3]. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-12 4.8e-08 34.3 4.9 1 99 16 130 16 131 0.81 2 3 0.097 7.9e+02 1.5 0.1 24 49 214 239 194 248 0.73 3 3 1.5 1.3e+04 -2.4 0.0 88 98 329 339 313 384 0.62
Sequence Information
- Coding Sequence
- aTGGCTGCATATAATTCGTCATTACgttatttatttgaattaagATTTCCAATAAAATTATGGTCAATTATAAATAGTACAAATGAGGCAATAACATGGTGTAAAATAGATGAATCACTAATAGTATTacaatcatcatcattaataATTGGATCATCCacatcattattatcatcatcaattattttaattaataaagaattacttacaaaatatttacaatcGCCTGTATCAATATTTGCTGCaaaagaatttaaaacattCGTTATAGAATTAGAAagatataattttaaaaaaattataactgAAATAAGTAgtgataatttttttacattttatcaTGAGAGTTTTTTACGTGGtcaatttgaattattatcaCAAATAACTAAACCCCTACTACAGTCATCATCCACATCATCATTACCAACACCaaaaattagtaaaattaAGAAGGctcaatttaaattaaaaattctagTACGAACAAATTATATGAtacaacatttaaaaaatgaattatttaaatatgaaaagaaTAATGTTGAATTTATTGAAGTATCGAATGATTTATTCATAAATCCATATGAGACAACATCTGtatttgaagaaaataatgaatatgCTGGCTTTTATGGTTTTCATcataatataaatgtacaaaaaattaaagaattttatgatgaatttttaccaaaatATGCAGAAACAAATgAACAAGAAATTATTCAAAGAGGAAATATAGAAGATTGttcTATGGAACATCAGAATACAAAAATAGATCAGACACCTGAAAATACAgctatttttgaaaattctttagAAACATTAAAAAACACAAGCGATATAAGAAATATGGATGGAGCTAATACCGATGAATCATATAACTTTTTCTTTGGGTCAAATGACAATGGACAATATTATACGCTTAGTGGTTACAAAGgAATTGAAGAGTTGAATAAAgattattataatgaaaatgaacaaaatgatgtaaaattattattagaagatattaaaaattacGATTATGGTAATGATAATAGTATTCAAGTTAAAGACGAAAATATTCCAATGGaagaatttataacatttaattcagcatcatcatcaaatgaatatataaataaaatagaaattaataGTGAACAATTTCAGGAATTAACAACGGATTTTGATAATGGTATCAATcaaaattcagaaaataatttaaacacAATTTTATCTGAAAGTATGGACCTTTTATGTGATAAATAG
- Protein Sequence
- MAAYNSSLRYLFELRFPIKLWSIINSTNEAITWCKIDESLIVLQSSSLIIGSSTSLLSSSIILINKELLTKYLQSPVSIFAAKEFKTFVIELERYNFKKIITEISSDNFFTFYHESFLRGQFELLSQITKPLLQSSSTSSLPTPKISKIKKAQFKLKILVRTNYMIQHLKNELFKYEKNNVEFIEVSNDLFINPYETTSVFEENNEYAGFYGFHHNINVQKIKEFYDEFLPKYAETNEQEIIQRGNIEDCSMEHQNTKIDQTPENTAIFENSLETLKNTSDIRNMDGANTDESYNFFFGSNDNGQYYTLSGYKGIEELNKDYYNENEQNDVKLLLEDIKNYDYGNDNSIQVKDENIPMEEFITFNSASSSNEYINKIEINSEQFQELTTDFDNGINQNSENNLNTILSESMDLLCDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -