Basic Information

Gene Symbol
ct_1
Assembly
GCA_963971155.1
Location
OZ020123.1:17090405-17093845[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-32 5.5e-28 97.6 0.0 3 76 380 454 378 457 0.96
2 2 7.2e-31 7.8e-27 93.9 0.0 3 76 579 653 577 656 0.96

Sequence Information

Coding Sequence
ATGCCACAATATGGTCGTTCTGATGATCCTGTACCCGAGGATCGTATTGCACATATTCTATCGGAAgcatcaaatttaattaaaccACAAGGTCATGGACCATCACATCATATGTCACAGCATTCATCACCATTGCAACATCAATCGcctcatcatcatcaacagcagcagcaacaacaacagcgggaacaacaacaacatcgagagcaacaacaacaacaacgaGAGCAGCATCAGCATCGAGAACAGCAACAACAACGAGAGCAGCAAAGAGAACAAAGTCATCAACAGTCTTCATTGGCTGCAAGTCAAATGGAAGACTCTCACAGTAACGAGGATTCAAAATCTCCACAACATAATCAATGTCCTTCACCATTTTATAAGGATCCACTACAAAGGAGGATgaaaaagaatgaaaatgatgaaatcTCTCAAGACAAAGTTGCCAGAATTTATCAGGAGGAAATTGCAAAACTAATGAGTCGTACACCAAGAGAAGCAGGATTTCCCAGttttctttttccacatttttTCAGTGGTGGCATGCCACCAGCAATGAATCAAATGCCGGATGAAAATATTCGAATGGCTTTAGAAGCTTATCATAGAGAACTTGCAAAACTACAGCAAACAGGAGGAGCTATTCCAAATTTTCCAAATCTTCCTGGTTTGTTAGCATTACAACAACATGCTTTGAATGGAGCCCAAGATTTATCTGTGCCAAAAGAGAAAGCACTAAAAGTTAATGGACAAcaaaattcatcatcatcatcaacgTCATCCATTGACCAAAATGATCAAAATACCAAAGAATCAAATGCTAGTGATGATGCTCTTCGACATTCGAGCGCATTTAGTTTAGTTCGACCAAAACAAGAGCCTGAAAGACCTCCAGTTTCAAGTAGTGCTCCAACAAATCCAACACCAACAGCACCTAGTCCTCTAAGTAATTCTATTCTTCCACCAGCAATGACACCAACAGACGATTTTTCAGCAGCAGCAAGTCCTTTACAAAGAATGGCTTCCATTACAAATTCACTCATAACTCAACCACCAGTAGCTTCTCATCATAGTACTCCACAAAGGCCAATGAAAGCAGTTTTACCGCCAATCACACAACAACAGTTCGACATGTTTAACAACTTAAACACAGAAGACATTGTCAGACGAGTAAAAGAAGCCTTATCACAATACTCTATAAGTCAGAGATTATTTGGTGAATCAGTTCTGGGTTTATCACAAGGCTCTGTGTCCGATTTATTAGCTAGACCGAAGCCCTGGCATATGCTTACACAAAAAGGTCGAGAACCCTTTATAAGAATGAAAATGTTCTTGGAAGATGAAAATGCAGTTCATAGGCTTGTGGCAAGTCAATATAAAATTGCTCCTGAGAAATTAATGCGAACAGGAAATTATAGTGGTAGTCCGCAAATACCAACAAATCTTGGTAATAAAATGGTTCCAATGCAAAAAATGATGAATGATCTAAAAATGCAGGAGCCCCCGCATATGATGCAAATGCAATCGCCTGTAATGAGTCATATCCCAACATCGCAACATCAGGGTATGCTGCTGACTCCACCTGGTCTACCTCCTCACCATGCCATTAGCTTGCCAAATCCAGTAGAGAAAAAACCAATGATGATGCCAGTTCATTCACCCCAACAAAATAATGCCATGCGTAGCATGCATCAACATATGTCACCAACAGTGTATGAGATGGCAGCATTGACGCATGATTTAGACACACAAGTAATTACAACAAAAATCAAAGAAGCTCTATTGGCTAACAACATCGGGCAAAAGATATTCGGAGAAGCTGTTCTTGGTCTGTCTCAAGGATCAGTGTCGGAATTGCTTTCAAAACCGAAGCCATGGCATATGCTTAGTATTAAGGGAAGAGAACCTTTCATTCGTATGCAATTATGGTTGTCCGATGCAAATAATGTCGAAAGACTTCAGGctattaaaaatgaaagacGAGAAGCAAGTAAAAGACGTCGATCGACAGGCCCTGGAACTCAAGACAATAGTTCAGATACTAGTAGTAATGATACAGCAGACTTTTATACCAGCAGTCCAGGACCAGGGTCTGTTGGATCAGCGCCTGGGGCTCCaccaaataaaaaacaacGTGTTCTATTTTCTGAAGAACAAAAAGAAGCACTTAGATTAGCTTTTGCTCTTGATCCATATCCAAATGTAGCGACGATAGAATTTTTAGCAAATGAATTAGGCTTAGCAACTCGAACTATCACAAATTGGTTCCACAATCACAGAATGCGACTGAAACAACAAGTACCGCATGGTGCACCAGCGGAACCTGTCCCAACTCGTGAAAGTCAATCAGGAACTCCATTTGATCCTGTACAATTTAGAATTCTTTTAAATCAAAGACTAATGGAATTACAAAAGGAACGTATGGGATTAGCAGGTGTCCCACTTCCATACCCACCGTATTTCGCCGCAAATCCAAATTTGGCAGCATTAATTGGCCGAGGTCTTCTGCCAAGTAGTGAGCCCGATTTAGCAGCACTGAATAACGCTTTTAAAGAACAAATGAGTGGTTTAGATTTATCAATGAGTTCTCTCAAACGCGAACAAGATGAAGATTTCGAAGATGTTGATGGCGAAGCAGATAGTCATGTATCTGACAGCGGTTCCATTGACGGATCTGATGTGAAACCAGATCTCAAAGACACTCCAACATCAACTTTTCCAGGTGCAGCAATGCAATCGAGAACATCTAGACGTAAACCAGCTGCACCACAATGGGTTAATCCCGATTGGCAAGATGATATTAAAGCTGCAGCAGCAGCGGCGGCAGCCGCAGCAGTAGCAGCAGCAGGTGCAGCTCCATTATCAGGTAATATGGTTGGAACCACGGGTGTAAATGACCAAGAAGTTATTATAAATGGAGTTTGCGTTATGCAACAACAGGCTGCCGATTATAGCCGGAAATCTGTTGGTGAAGAAACCGTCCGTATTGAACCGACAGCAGTTCAAGATCGTTTTCGTGATGATGCAGCTGAAGATGATGCTGCATCagataatgatgatgatgatgatgtacGTGGTGAAACAGAATCAAATGTATCAAATAAACCGTCCGAATGCGGTGAACctaatgataatgatgaaaatgaaacaGAACCagaaattattacaattaaacaagaaaaatgtGAGAATAATAGTAATAGTAGACGTAGTTCAATTGGTAAAAGTAGTGATGTGGTAGAAAATCCTTCATGTAGTgatgaaacaaaacaagaacatccagatgatgataatgaaaatggatggaattattaa
Protein Sequence
MPQYGRSDDPVPEDRIAHILSEASNLIKPQGHGPSHHMSQHSSPLQHQSPHHHQQQQQQQQREQQQHREQQQQQREQHQHREQQQQREQQREQSHQQSSLAASQMEDSHSNEDSKSPQHNQCPSPFYKDPLQRRMKKNENDEISQDKVARIYQEEIAKLMSRTPREAGFPSFLFPHFFSGGMPPAMNQMPDENIRMALEAYHRELAKLQQTGGAIPNFPNLPGLLALQQHALNGAQDLSVPKEKALKVNGQQNSSSSSTSSIDQNDQNTKESNASDDALRHSSAFSLVRPKQEPERPPVSSSAPTNPTPTAPSPLSNSILPPAMTPTDDFSAAASPLQRMASITNSLITQPPVASHHSTPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHRLVASQYKIAPEKLMRTGNYSGSPQIPTNLGNKMVPMQKMMNDLKMQEPPHMMQMQSPVMSHIPTSQHQGMLLTPPGLPPHHAISLPNPVEKKPMMMPVHSPQQNNAMRSMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQAIKNERREASKRRRSTGPGTQDNSSDTSSNDTADFYTSSPGPGSVGSAPGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGAPAEPVPTRESQSGTPFDPVQFRILLNQRLMELQKERMGLAGVPLPYPPYFAANPNLAALIGRGLLPSSEPDLAALNNAFKEQMSGLDLSMSSLKREQDEDFEDVDGEADSHVSDSGSIDGSDVKPDLKDTPTSTFPGAAMQSRTSRRKPAAPQWVNPDWQDDIKAAAAAAAAAAVAAAGAAPLSGNMVGTTGVNDQEVIINGVCVMQQQAADYSRKSVGEETVRIEPTAVQDRFRDDAAEDDAASDNDDDDDVRGETESNVSNKPSECGEPNDNDENETEPEIITIKQEKCENNSNSRRSSIGKSSDVVENPSCSDETKQEHPDDDNENGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118591;
90% Identity
iTF_00118591;
80% Identity
iTF_00118591;