Basic Information

Gene Symbol
kn
Assembly
GCA_963971155.1
Location
OZ020118.1:6885494-6890110[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-119 3.3e-115 386.5 0.0 205 385 1 209 1 212 0.99
2 2 9.4e-11 1e-06 28.2 13.3 421 514 211 309 208 322 0.74

Sequence Information

Coding Sequence
ATGAGACGATTTCAGGTTGTGATAGCAACACAAGTATCTGTTGAAGGACCATTATTAGCTATTTCAGATAATATGTTCGTTCATAATAATTCGAAACATGGTCGTCGTGCTAAACGTATGGATGCAACGGAAGGTACAGGAAATTCTCCTCTCGCTATATCAGGGCATCCCCTTGCACCTGACAGTACATACGACGGACTTTATCCACCCTTACCAGTTGCGACACCATGTATTAAAGCGATATCACCTAGTGAAGGATGGACAACTGGGGGTGCAACTGTTATCATTGTTGGTGATAACTTTTTTGATGGCCTTCAGGTTGTTTTTGGTACGATGTTAGTATGGAGTGAATTGATCACATCACATGCAATACGTGTTCAAACACCTCCAAGGCATATTCCTGGTGTTGTTGAAGTAACTCTATCATATAAGAGTAAGCAATTTTGTAAAGGATCACCAGGACGATTTGTTTATGTCTCATTAAATGAACCAACAATAGATTATGGATTTCAAagattacaaaaattaatacCACGACATCCAGGAGATCCAGAAAAgttacaaaaagaaattattttaaagaGAGCTGCTGATTTAGTTGAAGCTTTGTATTCAATGCCgagGTCACCTAGTGGTACCAGCGGTTTCAATTCATATGCTGGACAATTAGCTGTTAGCGTACAAGATGGGACCGGTCAATGGGGAGAGGATGAATACCAAAGAGCACAAAGTAGTAGTGTTAGTCCTCGTGGTGGTTATTGTAGTAGTGCATCCACGCCACATTCATCTGGTGGATCATATGGTGCCACAGCAAATGGTTATGGACCAGCACCAAATATGGGCAcattatcatcatcaccaGGCAGTGTGTTCAATTCAACGTCAAgCAGTGCATTTTCACCATTaattacaacaacaacatccCCATGGCATCAAACATTTATTCCGCATCACCATCAATCCTGGCATAATCCTCAGACGACAGCGGCTGCTACAGCTgtttaa
Protein Sequence
MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLAISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPSGTSGFNSYAGQLAVSVQDGTGQWGEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGTLSSSPGSVFNSTSSSAFSPLITTTTSPWHQTFIPHHHQSWHNPQTTAAATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01116233;
90% Identity
iTF_00454318;
80% Identity
-