Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963971155.1
Location
OZ020118.1:2574085-2581646[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-14 1.1e-10 42.6 0.5 2 89 436 516 435 516 0.86

Sequence Information

Coding Sequence
ATGAACAATTCACCAAGATGTTTAAAACCACTTGTTCTTGCGTTGGGTGATTGTATACCAGTACGTCCTTGGACAGATTCACCAATTGCTTGTTTAGCTGAGGTACGAATGATATGGCGAGATAAAAATGAGACATCTTTATTAACAGGATTACGTTTGTATTTTTTACCGGAAAATACACCAATGGGACGAAATTGTCATGGTGAGGACGAAGTCGTTGCTATATCTGATAAGGTAGTCATACGTGCTGAAGACTTACCAACATGGTGTGATGATAAATTACAATGGAATTGGGGCTTAAAAAGATCTCGATcaataaaagaaataacatGTACAAAAGAGATAACACCACCATCAACTCCACAATCATCACCGTTATCACCTAAAGAAAATTTAACACCGCCACTATCAGCGCcaacaacatcaacaacaaacaaattaaaatgcaaTAGCAACAACATTTATGATGATGTTCctgtaaataaaattacttcCTTAAGAAGCTCACAATTGGATTTTACTGAAGTCGATAAAGAAAAGCAAATAACCGATTCACAAGTAAAAATTGCAGTTTTAAGTTACCCTAGATATTGCCGTTATAGAGCAACATTGAAACGATTAGAAGGCCTCGATGATGAATGGTTTAAAAATTCTATAGTTGGAGCATTATGTGGTTTCTCAGCTGCTACCTCAGATTTTCGAGTAATGTTCTGTCGAGATACATTCGATTATCCAGAATTAGAGACACATGAACTATTATGTAATCATTTAGCACCAAAATTAAAAGGTCGACCGCGTGGTAAGAAAAAGAAGACCCGTTCAGAATCACCATTTACTGGAGGAAGAAGAACATTCGATTCAGATAGCGAATCAAATGATTCTGATATATCAATATTTTCACTTGGAAAgGGTACATGTACGCCAATACAACCACGTCCTCATTTACGTTTTAATCATCGACCAATAAGAAGTAAAGTTATGAAATCAGAAATCGATTATAAACCATACAGAAAATTCCAATTGAAAAAAGAGAAGGGAATTATGGATACACCATCACAATTAGAACGGCGAACTCGACAAGCTAGCATTACTAGTAGTAGCAATCAGAAACTGAACGACAAGAAGAAATATTTGCGAGCAAATCCTGAAAGAAAACGAAGAGATATAGAATCTGTTTCGATAGCTTCATCTTCTTCGTCATCATCTGCATCATCTACATCATCCACGTCAACATCATCGTCATTGATAGCGTCAAGATTATCAAAACGGCGAGCATCGAATTGCATGTGGAGCACATCATCAGAAGAGAAATTCTTCTTAAGGAAATTACACGAATTTCATATTAAACAGAATAATATCATTCCAAAAGTGGTATGGCTTAGTTTAAAAGGAGTACATTTGTATTCAATATTTCGACAAGTGAAAAAGCTTGGTGGTTATAATGCGGTAACAGAGAATAAATTATGGAAACAATTGTTTGGTGAGAAGACAGATATAAATCATACGATAACAAGgaaaaaatatgaaagaatTTTATTACCGTTAGAAAGATCTGAATTAGtaactaaaaagaaaaatgaaaagaaaaaacgaacAGAATTGAATGAAGATGAGTCTATTAGCAAAGAAACCGAAGATGAAGACAATGAAGAGGATAGAAATGAAGACGAATATAAGAAAGAAGAGGAGAAAGGTAATAAAAATAGAGAAGTGGATAAAGAAAATTCGGATACCTTAACTGCTCAAGTGGAGTGTAAGtcaaaagaaaatgttgaaaaGGATCAAAAAGATGATATTTGTCATGATACTGAAGccaaaataaaaagagaaaaagaTATAATTGAAATACCAGGAGATGAttcagaaaaagaaaacataaaagaACCATGTAGAACAATAAAAtctgaaaaagaaaattgtgaATCAGATGATGACATACCACTTAAAATTTCTTCATTTAAAGTTTgtgtaaaaaaagaaaaatctcCAGAGAAAATTGAACAAGAATTAAGTAGAGAAGATTTAGcaaaaattcaagaaaaagTTAAATCAAAAACGACAACAATGACAGCATCGCCACCGCCTTGTAGTCCGAATGTAAATACGATTAGTGCAACATCGACAAATGGAAGAATATCGGTAACATCGAGTCCTTCGGCATCTGTTTCAGTGCCTGTTACTGTAATTGTTGGAACGCCAGAATCAACAACAAAGCCTGACGAAAATTTATCACCCGCAACCAGAACACATTTAAATTCTAATGAAAGCATTCAGCAGAAATTACAGCAAAAGGCACCAATAATCTCAGGTATGTCAACGGCGAACCCTAGTAACACTTTAGATTCAGCTGCACAACATCAGTCATCATCGCAAATACAAATTCAACAGCCTCATACCACTATCACAGTTCATCAAACAACAATTCATCCCCAAACACATTCCAATTTGATGTCATCATCTTCTTCGCAATCACCCCATCATCAAATAACGaatcaaattcaaattacaAATCAAATACAAATTCAACAAATCACGGTACAACCAACAGGGAACTTAAACGGTAAAGGACCATCAGAGTATTGTTGCAATTTTAAACAGGAAAAAGATTATCAGGAAgtgaaaattgaaaaacgTGATATTAACAGAGATAATGATCATAagaatcaaaaatttaatattcaaaacaataataataataacaatagtaataataaaaatattttgagaCCTTtcgaaaaagaaaacattCCATTTATAGCCGCAGGAACGACAATAACCCCGGTGCTGTCATCACAAACACCATTGCCTAAAAAATCTCCAGAGATTATTGATTTAGTGGACAGTGATGGGGAAAATAACACTAGTAATCCTCCAAATCCTCCTAATCCGCCTCCTGTTAAATATCAACCTCTAAGATCTAGAGGTAGATCAAGCTATGATAGTACAGTTCCAGTTCCTCCTgtaaagaaaagaaaattagaCATTTTACGAGAAGGAGGTCTTGAAGTTACAGCGATTAGTAACAAACATGGAATTATATCAACGGCACCTTCATTGTCTCCAGTTCCACAAAGGGTTCCACCACATACCCCAGTTAAACCAGAACGATACTTGGAAGCATCAAAATTTAATCTTCCACCAACAACAAGCCTCATTATTCCTGTTAATGGATCACATATAAATGTACCAAAAATCAATGCTCAGAGTATGTACAGTAAAACGGAGAAGATTTTTGGCAATCCAAAGGATGTATTACCACCAAATCCAATGTCAAGTGGTTCTGGTGAAATTTTGGACTTAACTGTAAAATCTCCATTGAAATTCCCATCATTAGAAATTCATCCAATTCCATCAGCAAGACATGTTCGATCTCCGCCACTTTCAAACAGATCTTCAACAAATGCTGCTATAAATTTGACAAACACAAGGCCAAAATTGGCAGAGACGGGCTTACAGATAACACTAGTGCCATCAAATCGGTCATCAAATGCAACATCTATGCCAATACCAATGGTAACAAAACATTTACCCCAACAGCAACCACAGATTCAAACGCAGTCGATGCCATCGCAATCGCAATCGCAATCCACATACCTTCATCAACCTCCACTGACATTAACGCAAAATGTGCACAATTCTCAAAATCATAACATGAAACGAAAGGCAGTAGATATTTTACCTATACCAGTTCTACCAACGAATCAAAGACATCATCCTACTACGGTCACAACAAGCAGTTCTTATCACCAATCAAAGCAGAGTAGAATCGACAGAAAAATGAACATTCCACAAGCAGCACCGCTACCACCACCATCACAAGCTCCTGTTTCATTAACTGCCCTTCCTCCACCAGCAAATCAATCTTCTCCGAAGCCACTAACTCTAACCTCAGCACCTCAAGCACCAATGCCACTACATCCTTTGCCCACAGATCCAATTGACCCCAAATCTCCATTATTTCCTTTTCCACCTTTTATTTCTCCATTAGCGGCAGCAGCTGCAGCAGCATCAGCAACAACACCAAATCCCTTCTTACCAATGATGAATCCTTTACTTTTGCCAAATTTTTATCCTCAAGCAACAGCAGCGCCTCATCTTTTTTTGCCGAATCAACAAAGAATCACAGAATTACTGCagttatataaaaatttgcCACCAGAAATAACGGGAACAGTTGGAATGAACGGTATTAACATTAATAGCATGGGTGGACTCGGTGTTGGTGGCGGTGGTAATGGTGGAGTTATTCCTCCAATAACAAAAAGCTAA
Protein Sequence
MNNSPRCLKPLVLALGDCIPVRPWTDSPIACLAEVRMIWRDKNETSLLTGLRLYFLPENTPMGRNCHGEDEVVAISDKVVIRAEDLPTWCDDKLQWNWGLKRSRSIKEITCTKEITPPSTPQSSPLSPKENLTPPLSAPTTSTTNKLKCNSNNIYDDVPVNKITSLRSSQLDFTEVDKEKQITDSQVKIAVLSYPRYCRYRATLKRLEGLDDEWFKNSIVGALCGFSAATSDFRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGKKKKTRSESPFTGGRRTFDSDSESNDSDISIFSLGKGTCTPIQPRPHLRFNHRPIRSKVMKSEIDYKPYRKFQLKKEKGIMDTPSQLERRTRQASITSSSNQKLNDKKKYLRANPERKRRDIESVSIASSSSSSSASSTSSTSTSSSLIASRLSKRRASNCMWSTSSEEKFFLRKLHEFHIKQNNIIPKVVWLSLKGVHLYSIFRQVKKLGGYNAVTENKLWKQLFGEKTDINHTITRKKYERILLPLERSELVTKKKNEKKKRTELNEDESISKETEDEDNEEDRNEDEYKKEEEKGNKNREVDKENSDTLTAQVECKSKENVEKDQKDDICHDTEAKIKREKDIIEIPGDDSEKENIKEPCRTIKSEKENCESDDDIPLKISSFKVCVKKEKSPEKIEQELSREDLAKIQEKVKSKTTTMTASPPPCSPNVNTISATSTNGRISVTSSPSASVSVPVTVIVGTPESTTKPDENLSPATRTHLNSNESIQQKLQQKAPIISGMSTANPSNTLDSAAQHQSSSQIQIQQPHTTITVHQTTIHPQTHSNLMSSSSSQSPHHQITNQIQITNQIQIQQITVQPTGNLNGKGPSEYCCNFKQEKDYQEVKIEKRDINRDNDHKNQKFNIQNNNNNNNSNNKNILRPFEKENIPFIAAGTTITPVLSSQTPLPKKSPEIIDLVDSDGENNTSNPPNPPNPPPVKYQPLRSRGRSSYDSTVPVPPVKKRKLDILREGGLEVTAISNKHGIISTAPSLSPVPQRVPPHTPVKPERYLEASKFNLPPTTSLIIPVNGSHINVPKINAQSMYSKTEKIFGNPKDVLPPNPMSSGSGEILDLTVKSPLKFPSLEIHPIPSARHVRSPPLSNRSSTNAAINLTNTRPKLAETGLQITLVPSNRSSNATSMPIPMVTKHLPQQQPQIQTQSMPSQSQSQSTYLHQPPLTLTQNVHNSQNHNMKRKAVDILPIPVLPTNQRHHPTTVTTSSSYHQSKQSRIDRKMNIPQAAPLPPPSQAPVSLTALPPPANQSSPKPLTLTSAPQAPMPLHPLPTDPIDPKSPLFPFPPFISPLAAAAAAASATTPNPFLPMMNPLLLPNFYPQATAAPHLFLPNQQRITELLQLYKNLPPEITGTVGMNGININSMGGLGVGGGGNGGVIPPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-