Aplu103528.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- KIF4A
- Assembly
- GCA_951804975.1
- Location
- OX638119.1:16053020-16061763[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.004 2 11.6 2.8 2 22 1081 1101 1080 1104 0.91 2 13 0.18 90 6.5 5.3 1 23 1186 1208 1186 1208 0.93 3 13 0.016 8.2 9.7 0.5 1 23 1215 1238 1215 1238 0.91 4 13 0.002 0.99 12.6 3.1 1 23 1244 1266 1244 1266 0.97 5 13 0.00018 0.089 15.9 2.3 1 23 1272 1294 1272 1294 0.99 6 13 9.8e-06 0.0049 19.9 2.2 1 23 1300 1322 1300 1322 0.98 7 13 0.0023 1.2 12.4 0.1 1 23 1335 1358 1335 1358 0.95 8 13 0.00042 0.21 14.7 3.1 1 23 1374 1397 1374 1397 0.96 9 13 0.0002 0.1 15.7 0.5 1 23 1405 1428 1405 1428 0.98 10 13 0.0013 0.65 13.2 0.7 1 23 1434 1456 1434 1456 0.97 11 13 0.00099 0.5 13.5 5.2 1 23 1462 1484 1462 1484 0.98 12 13 8.2e-06 0.0042 20.1 1.5 1 23 1490 1513 1490 1513 0.98 13 13 0.00069 0.35 14.0 0.9 2 23 1519 1540 1519 1540 0.97
Sequence Information
- Coding Sequence
- ATGGGTGAAGATACAGTTAGAGTTGCTGTACGTATACGTCCATTAGTAGAAACTGAAGTTGAAAGGGGTTGTCAAATATGCTTACATGTTGTTCCTGGTGAACCACAAATTGTTGTGCATAATACAGATAAAGCTTTTACCTTCAATTATGTATTTTCATCTGATGTTGATCAGCAGGACTTTTATAATATTGCTGTTAAAGAAAtggtaacaaatatttttcaagGTTACAATGTTACTATATTAGCATATGGCCAAACAGGAAGTGGTAAAACCCATTCAATGGGTACAAATTatgtagaagaagaagatatgGGTGTTATACCACGAGCAGTAcatgatatatttaatataatttcatcAAAGGATGATTGGAGTTTCAAAGTTACAGTTTCATTTATGGAACTTTATCAAGAACAGTTATATGATTTATTGGCTGATAAACAGCGAAGTCAGTCTGTTGTTGACATTAGAGATgatggaaaaaatataaaagttactGGAATTGTTGAAAAAGAAGTTACAAATGCAGTAGAAGCATTATACTGCTTAACACAAGGATCTCTACGCCGTGCAACAGGTGCTACAGCAATGAATGCACATAGTAGCAGAAGTCATGCAATATTTACATTATGCATATGTCAACAAAAAGAAGGTGATCCCAATACAGCAACAACATCAAAATTTCATCTAGTAGACTTAGCTGGGTCAGAACGCAGTAAAAAAACACAAGCAACTGGTGAAAGATTTAAAGAAGGTGTTAACATAAACAAAGGTTTATTAGCATTAGGAAATGTTATATCTCAATTAGGAGAAGGTGGTTCTATGTCCTATGTTGGATATAGAGATAGTAAACTTACGAGATTGTTGCAAGATTCTCTCGGTGGTAATTCTATGACACTGATGATAGCATGTGTTAGTCCAGCAGatTATAATTTAGATGAAACATTAAGTACATTAAGGTATGCAGACAGAgcacgtaaaataaaaaataaacctaTGGTAAATCAGGATTCAAAGGTATCGGAAATAAATCGATTGAACAAATTAATACAAGAATTGAAACTTACTTTGGTGGATCAAGAACTTAGAACCACTTGTCCAATTGAACATAAAgaacttgaaataaaaaatcaatcttTGCAAAAAAAGATAAGGGACTTGacggaaaaattaaataataatttaattgaaacTGTAGTTATGCATGAAAGGGCAGAACTAGCTGAACAAGCTAGAGAAAAAATTCAGGCTGATATGGTGAAAATATTAGAAGAATGTAAAGAACTTTTAGATATCTTTAATAAAAATCCTGAAGAACATAATGAGTATTATACAAAGTTAGAAGCTTTATACTTAAAAATTCTTAATATTCAAAATGATCAGAAGAAAACATTAGAAGAACTTATCAATTGTGAAATATCATCCGAAAATGCAAAACTATTCACAACTAATGATATAGAGGAATCAGAACATACATCCATAAATGAATGTTCTGAAAATACAGATAGTTTAGATGATTTTGATGAAAAACACGAAGAACACACTTTACTACAAGTTAAAAGGAACAATGAAGTACAAAATATCAATAAGGAACTCGCCATTAAAGAAAGTCTTATATGTCAACTCTTAAAAAACTCATCTCAAATAATAGATTATTCAAAAGAGATACAAGAAATGGAGCAAGAGATAAAACGACTTCAAACGGAAAGGGAAGAGCTTTTACAAGCGGTACAAAATGTTCAAGCGAATAATGCTAGCTCAAAGCTAGCAGAAAGTAGGCGTAAAAAGGTACaagaattggaaaaaaaaatagcagaaTTAAGACGTAAAGTAGTAGAGCAAGATAGAATAgtcaaaatgaaagaaaaacaagatcAACAAATAAGAAATCTATCAAACGAAATGCAATTATTGAAACAAACTagggttaaattaattaaacaaatgcGCAATGAATCCGATAAGTTTACAAAGTGGAAAGAATCTAAGGAAAAGGAAGTGAATAGACTGAAGGatcaaaatagaaaacaaataaACGAAGTGTCGCGTCTAAAAATGTGGCATAGTAAACAAGAAATCGTGTTTAAAAGGAAAATGGCAGAAGCTTTTGCTGTCAATAAAAGATTGaaaGAAGCTCTTGACTTACAAAAAAGAGCAATAATGAGGAAGGAAAAGATGAATAATAACGTTGATAAAATTCGGAGTTGGTTGACTCAAGAACTAGAAATATTAGTAAGCACTGTTGATGCAGAATATTCTCTCGAAAAATTAATGCAGGATAGAGCTTCATTGACGTGTATGCTAGATAAATTTCAAAACAGTGACAATGCAGATGAGAACAAAATTGATGAACTTacaaaatttttagatttaCGTAATACTCAAATTACAGATCTTCagcaaaaaataattgaatctgATCAAGaaaGTAGAACACATACAAGGTGGCAGAAAATACACACAATGGACGATGCAAAAACTgctcttaaaatattatttaagcaTACTGCAGAAGATAGAAGAAAACAATGTATAAAAGAATCCACATACAATGAACTTCTGGAAAAATGTGAATTATTGCAAGCACAATTGGAAGTGTATCGTGCAAATGAGAAAGAAAGACGTATGTCAAAGCAACTTACAATAAATAACATACGCAGCATTGAAGAATATAAAACTGAAGAAAACATTAAGAAGGAAGAATCGAATTCTTATCCAGAAGATCAACAACTAGAGAAAACGattttaaataaaaccaaaaatgaaaagaataaattcaaatcaaaaGTTCCTGAAAAGATAACAACAGAAGATGAATGTTCTCCAACAGATGATAGTATTATTGAAATTGATGATGTCGAAAAAGATCCAGATTGGACAAAAACGCCACTATATAATCGTGTTCAAAAACTTTTgaatgcaacaaaaaattattcactTGATCGCACAACAACAAAACGAACATCTGATGGAGATATAAAATGTGGTTGTAAAACAAAATGTTCAACACGTCTTTGTACATGtcgtaaaaataaaactatatgtaGTAACTGTAGTTGTAACCCAGAAATTTGTCAAAACAAAGATTCAAAGAATTTGAATCGTACATTATTTTTGGATTATAAAAAGGAAGATCAAGAAAATGACGAATCTATAAAAAAGCCGagaGATTCAGTTATGGATGCACTGAAGAATATACTGAGATGTCGTTTATGTGGTGTAAATTTTGCAAAAGGAAAATGTAAAAAATGTGGAAAATTGTTTACAAAACGATCTAGATTGAATGGCCACCAAaagaattataaacattttggTATAAAACAAATACAAATTAATACTAGTGAAGATACTATTAGTGAAGATGTTATACAAAAGGCTATATCAACAACAAAACAAGAAAACATTTCTGTAAACTGCAATCTCTGTGGTAAACTAATTTCAGACTTGGATCCAGATGCTATTAATGATTTAGTTACATGTACTACTTGTGAAGATTCTACACTTTCTTTAATGGTAgatggaaatgaaacaaaagtaatCTCTCCACGTCAGTATCATTGTTCTAAATGTCCAAAACATTTTGTACGAAAAGAAAGACTAGAATTTCATGAAATGAGGCATaatgaaaatatgaatgaaTTTATCTGTAGTACTTGTGGAAAAGATTTTAGGGCGGAAAATTCTTTGTATGAGCATTACCTTTTTGTTCATAAAGGAGCAAGACCTCATATTTGTGAATTGTGTGGTAAATCGTTTCAATTGAAAGCTAGATTAAAAGAACATCATCGAATTCATACAGGTGAAAGACCATATCAATGTGATATTTGTGGTCAACGATGTAGAACTACAAATGCTTTAAAACTTCATAGAAAAATCCACTTTTCTCATAATAGATATACTTGTAATGTATGTAATAAGTCATTTAGTAAAAAACAGAATATGAATGAACATTTAGAAAAGCAttggaaaaatgataaaagtgtAACATTACCACAGTTATTTACATGTCCCATATGTTTAGAAGACTTTCCAACATATCGTATGTTGAAATATCATATGATAGAAATTCACGAAATAAATAATCAGGATCCAATTCTGACTAAACAGAAACCATGGTATGAGTGTGCAGAATGTcatgaaaaatttaaacatcAAATGTCTTTAAAAGCACATAAAGAGAGAGCACACGAAGGAAGAGTAGATCCAATTTATCAGTGTGATATATGTAATGCTACATATAGAGTAAAACAACTTCTAGTTAATCATATTAAGAGTAAACATAATGGCGAAAGACGTTATAAATGTGCACAATGTGAAAAAGGATTTAATGACACGAAGTCCTTATACAATCATGTATTATTACATACTGGTAAAAAACCGTTTGTTTGTGAATATTGTAATATGAGTTTCAGAAGAAAAGATTCTAGAgatcatcatcgcagaaaacataCAGGTGAGCAACCTTATCAATGTCCAGATTGTGGTGAATCGTTTTCCACTTACAATAAtcgatctaaacatcgcaaacgaGAACATGGAGAAGGAGATCCTGAGTGTCCAGAATGTGGTGAAAAATGTAGTAATCAACAAGAAATTAGAATACACTTAAATAAACATCttggagaaaaattgaaaaaattacaaaatataaaatctgaagaaatatag
- Protein Sequence
- MGEDTVRVAVRIRPLVETEVERGCQICLHVVPGEPQIVVHNTDKAFTFNYVFSSDVDQQDFYNIAVKEMVTNIFQGYNVTILAYGQTGSGKTHSMGTNYVEEEDMGVIPRAVHDIFNIISSKDDWSFKVTVSFMELYQEQLYDLLADKQRSQSVVDIRDDGKNIKVTGIVEKEVTNAVEALYCLTQGSLRRATGATAMNAHSSRSHAIFTLCICQQKEGDPNTATTSKFHLVDLAGSERSKKTQATGERFKEGVNINKGLLALGNVISQLGEGGSMSYVGYRDSKLTRLLQDSLGGNSMTLMIACVSPADYNLDETLSTLRYADRARKIKNKPMVNQDSKVSEINRLNKLIQELKLTLVDQELRTTCPIEHKELEIKNQSLQKKIRDLTEKLNNNLIETVVMHERAELAEQAREKIQADMVKILEECKELLDIFNKNPEEHNEYYTKLEALYLKILNIQNDQKKTLEELINCEISSENAKLFTTNDIEESEHTSINECSENTDSLDDFDEKHEEHTLLQVKRNNEVQNINKELAIKESLICQLLKNSSQIIDYSKEIQEMEQEIKRLQTEREELLQAVQNVQANNASSKLAESRRKKVQELEKKIAELRRKVVEQDRIVKMKEKQDQQIRNLSNEMQLLKQTRVKLIKQMRNESDKFTKWKESKEKEVNRLKDQNRKQINEVSRLKMWHSKQEIVFKRKMAEAFAVNKRLKEALDLQKRAIMRKEKMNNNVDKIRSWLTQELEILVSTVDAEYSLEKLMQDRASLTCMLDKFQNSDNADENKIDELTKFLDLRNTQITDLQQKIIESDQESRTHTRWQKIHTMDDAKTALKILFKHTAEDRRKQCIKESTYNELLEKCELLQAQLEVYRANEKERRMSKQLTINNIRSIEEYKTEENIKKEESNSYPEDQQLEKTILNKTKNEKNKFKSKVPEKITTEDECSPTDDSIIEIDDVEKDPDWTKTPLYNRVQKLLNATKNYSLDRTTTKRTSDGDIKCGCKTKCSTRLCTCRKNKTICSNCSCNPEICQNKDSKNLNRTLFLDYKKEDQENDESIKKPRDSVMDALKNILRCRLCGVNFAKGKCKKCGKLFTKRSRLNGHQKNYKHFGIKQIQINTSEDTISEDVIQKAISTTKQENISVNCNLCGKLISDLDPDAINDLVTCTTCEDSTLSLMVDGNETKVISPRQYHCSKCPKHFVRKERLEFHEMRHNENMNEFICSTCGKDFRAENSLYEHYLFVHKGARPHICELCGKSFQLKARLKEHHRIHTGERPYQCDICGQRCRTTNALKLHRKIHFSHNRYTCNVCNKSFSKKQNMNEHLEKHWKNDKSVTLPQLFTCPICLEDFPTYRMLKYHMIEIHEINNQDPILTKQKPWYECAECHEKFKHQMSLKAHKERAHEGRVDPIYQCDICNATYRVKQLLVNHIKSKHNGERRYKCAQCEKGFNDTKSLYNHVLLHTGKKPFVCEYCNMSFRRKDSRDHHRRKHTGEQPYQCPDCGESFSTYNNRSKHRKREHGEGDPECPECGEKCSNQQEIRIHLNKHLGEKLKKLQNIKSEEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -