Aplu098326.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- HINFP
- Assembly
- GCA_951804975.1
- Location
- OX638117.1:15207343-15211408[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00013 0.066 16.3 2.3 1 23 86 108 86 108 0.97 2 16 9.8e-07 0.00049 23.0 1.8 1 23 114 136 114 136 0.98 3 16 0.00021 0.11 15.7 2.3 1 23 141 164 141 164 0.97 4 16 3.7e-05 0.019 18.0 0.6 1 23 170 192 170 192 0.97 5 16 0.00049 0.25 14.5 0.0 1 23 198 221 198 221 0.97 6 16 8.1e-07 0.00041 23.3 1.3 1 23 231 253 231 253 0.98 7 16 0.00042 0.21 14.7 1.7 1 23 257 279 257 279 0.95 8 16 2.4e-06 0.0012 21.8 1.3 1 23 285 307 285 307 0.96 9 16 0.0053 2.6 11.3 1.5 3 23 563 583 562 583 0.95 10 16 7.7 3.9e+03 1.3 3.5 1 23 587 609 587 609 0.96 11 16 2.1e-05 0.01 18.8 0.6 1 23 615 638 615 638 0.98 12 16 2e-06 0.001 22.0 0.3 1 23 645 668 645 668 0.97 13 16 2.5e-05 0.013 18.6 0.5 1 23 702 725 702 725 0.97 14 16 6.6e-05 0.033 17.3 2.6 1 23 762 784 762 784 0.97 15 16 3.8e-06 0.0019 21.1 1.0 1 23 788 810 788 810 0.96 16 16 1.2e-06 0.00061 22.7 1.0 1 23 816 838 816 838 0.99
Sequence Information
- Coding Sequence
- ATGTTGAAAAATCACGTTGTTGATTGCAGAGCTCTCGGGATCGTAGATTGGGACGCGAAATCCAAAGACTGCGGCGACCAGGTGACCAAGTCCTCCCATGATTCTACAGGATCTCATCCAACTACCGAGGAACAAGAGATAGATTCTATCAAAGAGGAACGGATTGAATCATCGGAGATCGATCATACTCTAGACCAGAATTCACCGATGAACActgtaaagaagaggaagagaattAAAACAGATGTGACCGATTACTTCTGTTCGATCTGCACGTTACGTTTCAACAAACCGAGAGATTACAAACGTCACATGATCAAACACAGCGATCTAAGACCCTATAAATGCAAAATTTGCGGCAAGGCGTTCAAACGTTCCTCAGAGATGTCCAATCATTCGCAACGTCATCGTGGTCTCGAATTCGTTTGCGAAGTGTGCGGTTTCACAACGATCAACAAGTTCTCCTTAAGGACACATCATCGAAGAGTACACGAACGTGACTATCGTTATCGTTGCGACCAGTGTGACAAAGGTTTTATGTCAAAATACGAGCTGGAAGATCACAAGGCAAGTCATCTAGGAAAGAAAACGTTCATCTGTGAAGTCTGCGGTAACGCTTATCCGCAAAAGTCTTACTTAGGGGCGCACAAACGTGTTATTCATGGAATACAAAAGCGCGCGCCTAAGGAGTTCCAGTGTAACACGTGCAGCAAGAGCTTCGCATCTGAGCAAAATCTACAGAATCACATGAATCTACACTCGCAAATGTTCCTTTGCGCCCAATGCGGTCAGAAGTTCGCTACCAATCATGCTTTAAATCTGCACAGTAGAAAGCACACAGGGGAAAGGCCGTATCTTTGTGATTTATGCGGACGGAGTTTTACTCAGAGGAGTAGTATGATGGCGCATCGCCGGAAACATCCTGGCAGTCATCCGCCACCTCCGCCTCTGCGTTTAAGTAGACTCGAGAACGACGAACAAAAAGTTTTAACGAGGTCTACGATCGCAGAAACGTCACTGGACCAGGGTAAAAATGATAGCGTGCCGTCCCAAGCCACTGTTCCATTTACAAGTCAAATCGAACATAATGCGACACCGCTGAAAATCGAAACCGATTACGAGGATAGTGAGAAATGCTCTCAAAACTATGAGAATGAGATTACCAATGATAATTGTTCCGATTTAACGGTGGACTCTGTGAAGTCGGTCTTAGTACCGATCAGAGATCCAGTgacgaaagaaattaaaaacacgCTGGTGCCTGTTGAAGTCAGGGATGAGTCTGGATTGAACATAATCAAAAGTGTGCTTATACCGATTTACGATAAAGATGGATTAGTATCTTACGAGATAAAGAAAGTCGTGGTGCCTATTCAATCTAAACAGATCCAACATCCAACGAGAACGATGAAGAACAAGGTGATAGTGAACaaaggtaaaaacaaccaggtgAAGTGCATAAagcaagaagtagaagaagaagaagaagaagaaaaggaacagTCACCGACAGAAGACAAAAAGAAGACACGCGAAAAAAGTGTAAAGAGACAACAGAAGAAGGAACCgagaaaaaaaacaggaaaatggTCTAAATATGTGTTGCAAGAAACTCCAGAAGATCTTTCGCAGATAAACAAACCTAAAGGTGAAGTGGATCACATACTGGACACActtcgaaacatctgcccgttcTGTCAGAGATGTTTCGAGGACGAGAAAGAGATGCAGAAACATGCAGTGAAGCACAAAAAACCGTacaactgtgacaagtgttgcaGAGGATACTTCACCGACTTCGGTTTGGAGGAGCACAAGAAGACCCACGAGGTGATCTCGTTCTATCAATGCACCATCTGTCAGATGCAATACAAAACCCCGAGCGGTTTAAGCAATCATCAAATGCGCGAGCATAGCAACCTAGATCCAAAGTACACTTGCGACGACTGCGGGAAACGATTCAAGATTAAGGTGGATCTTAGAGCACATATAGACAGATCACACATGAATCCCCTGCACATCTGTCGATTCTGTGGCATTGCTGTGAAGAATATCACGCATCACGAGTTGAGACACGAGGAAAGCAAGAAGGTTAACGCATTGTACCCTTGTAAATACTGTCCGAGGAAGTTCCAAGCGTGGTACAACTTGGAGAATCACTTGTTGATGAAGCACAAGGATCCGAAAACGGCGCCTGACATGTTACGGATGCTCTTCGAGAGGAAGTTCGGTTCCAGAGGTGATTTCTATCAGCACATGAACAATCAACCGGAAGTTAAACAGCACAAGTGTGAAGTTTGCAAGAAAACTTTCGCCTCTGAGTTCAGCCTTAGTAATCACATGACTTTGCATGCGCAAACGTACTTGTGCGCTCAGTGCGGCAAGAATGTTACCAATAAATATTCGTTGAAATTACACATGCGTACACATACGGGTGAAAGACCGTACGTGTGCGATCTGTGCGGACAGAGTTTCACTCAGAGGAGTAGCATGATGGTTCATCGTCGCAAACATCCCGGTGATCATCCACGACCACCGCCTTTCACACGTCGTAAACACGCGAACAATGAGCATTGA
- Protein Sequence
- MLKNHVVDCRALGIVDWDAKSKDCGDQVTKSSHDSTGSHPTTEEQEIDSIKEERIESSEIDHTLDQNSPMNTVKKRKRIKTDVTDYFCSICTLRFNKPRDYKRHMIKHSDLRPYKCKICGKAFKRSSEMSNHSQRHRGLEFVCEVCGFTTINKFSLRTHHRRVHERDYRYRCDQCDKGFMSKYELEDHKASHLGKKTFICEVCGNAYPQKSYLGAHKRVIHGIQKRAPKEFQCNTCSKSFASEQNLQNHMNLHSQMFLCAQCGQKFATNHALNLHSRKHTGERPYLCDLCGRSFTQRSSMMAHRRKHPGSHPPPPPLRLSRLENDEQKVLTRSTIAETSLDQGKNDSVPSQATVPFTSQIEHNATPLKIETDYEDSEKCSQNYENEITNDNCSDLTVDSVKSVLVPIRDPVTKEIKNTLVPVEVRDESGLNIIKSVLIPIYDKDGLVSYEIKKVVVPIQSKQIQHPTRTMKNKVIVNKGKNNQVKCIKQEVEEEEEEEKEQSPTEDKKKTREKSVKRQQKKEPRKKTGKWSKYVLQETPEDLSQINKPKGEVDHILDTLRNICPFCQRCFEDEKEMQKHAVKHKKPYNCDKCCRGYFTDFGLEEHKKTHEVISFYQCTICQMQYKTPSGLSNHQMREHSNLDPKYTCDDCGKRFKIKVDLRAHIDRSHMNPLHICRFCGIAVKNITHHELRHEESKKVNALYPCKYCPRKFQAWYNLENHLLMKHKDPKTAPDMLRMLFERKFGSRGDFYQHMNNQPEVKQHKCEVCKKTFASEFSLSNHMTLHAQTYLCAQCGKNVTNKYSLKLHMRTHTGERPYVCDLCGQSFTQRSSMMVHRRKHPGDHPRPPPFTRRKHANNEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -