Aplu110962.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- ZNF236
- Assembly
- GCA_951804975.1
- Location
- OX638122.1:17805129-17813336[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.00057 0.29 14.3 1.0 2 23 180 201 179 201 0.96 2 26 0.00043 0.22 14.7 1.1 1 23 207 229 207 229 0.98 3 26 3.7e-06 0.0018 21.2 0.4 2 23 235 256 235 256 0.97 4 26 0.0087 4.4 10.6 0.2 3 23 264 284 262 284 0.96 5 26 7.9e-05 0.04 17.0 0.9 2 23 295 316 295 316 0.98 6 26 1.3e-06 0.00066 22.6 0.8 1 23 337 359 337 359 0.99 7 26 1.3e-05 0.0066 19.5 1.2 1 20 365 384 365 387 0.95 8 26 3.7e-05 0.018 18.1 0.5 1 23 393 416 393 416 0.95 9 26 0.0031 1.6 12.0 2.2 3 23 427 448 425 448 0.97 10 26 0.00011 0.054 16.6 1.3 2 23 574 595 573 595 0.91 11 26 0.00014 0.068 16.3 1.7 1 23 601 623 601 623 0.99 12 26 0.00018 0.09 15.9 0.5 1 23 629 651 629 651 0.97 13 26 0.0057 2.9 11.2 6.7 1 23 745 767 745 767 0.98 14 26 4e-05 0.02 18.0 5.1 1 23 773 795 773 795 0.99 15 26 9.5e-05 0.048 16.7 0.8 3 23 803 823 801 823 0.97 16 26 0.00047 0.24 14.6 7.6 1 23 829 851 829 851 0.98 17 26 0.39 1.9e+02 5.4 0.9 2 23 1275 1296 1274 1296 0.96 18 26 0.0011 0.54 13.4 2.9 1 23 1302 1324 1302 1324 0.98 19 26 0.0002 0.1 15.8 4.1 1 23 1330 1352 1330 1352 0.98 20 26 1.2e-07 6.1e-05 25.9 1.4 2 23 1435 1456 1434 1456 0.98 21 26 0.00086 0.43 13.8 3.5 1 23 1462 1484 1462 1484 0.99 22 26 0.00029 0.14 15.2 1.9 1 23 1490 1512 1490 1512 0.98 23 26 0.00045 0.23 14.6 2.5 1 23 1518 1540 1518 1540 0.98 24 26 6.1e-06 0.0031 20.5 0.3 2 23 1778 1799 1777 1799 0.97 25 26 1.6e-05 0.0079 19.2 4.5 1 23 1805 1827 1805 1827 0.98 26 26 9.2e-07 0.00047 23.1 0.7 1 23 1833 1856 1833 1856 0.97
Sequence Information
- Coding Sequence
- ATGAAAGGAAAGATGTTGACGCGACACAATGTAATTACAGAGCCTCCTCATGTCGAGGCGATACCTATAAATCTCGTTGCTACCGAGGATGGTCGAACGCTTTTAGCACTGACAGAACATAAAGACGGTATGTTGGAAATTGTTGCAGCTCCTGTTACATTTATAGGTCAAAGTGGAACAGCTGCATCATTGATAGATGTAAAAAGTCTGAATGGAAATTTGATATTGCATTCGCCTGTTTTTCAAATAAGTGTTGAGGATGTTATCGGTGGATCTGAACTTGAACAGTCTATGCAAAATCTTGAAACAGAATCTGATAATGCAGAACATACAAAGATACACTCCTACATGGATGTAAAATGCAAGAAAACAATTACTCAAGAATATCAATACCTTTCTCAGAATGATCCACTAACCGAAAATGAAAAGAGTGGTAATTCTCCCAAACAAAAGTCAACAAGTGCAATTGTgagaaaaaataatcctggaagacctaagaaaaatgcaactcaTTCTTTGCAAgGCATAGAGAGTTTAAAATGCGACATTTGCCAACAAGAATTTGTTAAACAAACATTGTATCGGAAACATATGGAAAATCACGCGGAGGAGAAGCCACATCGGTGTCCAAAATGTTCTGCATCGTTCAATATACCGACAAACTTTACGCTTCACATGGCAACGCATAATACGGGTGAACCGAAATGTCCAGAATGTGGTAAGAAATTTGCGAGAATGGCTAGTTTGAAGTCACATATGTTGTTacacgagaaagaagaaaatctgtTCTGTACAGAATGTGAAGATGCATTCTCGACGAAAGCTCAGTTAGATGCACATTTGAAACTTCATGGGGAAAAATGGACGAGTGAAGAGGTACgaaaatgtaaattatgtaataaaCAGTTCAGTCAACCAGCCTTGTACAGGCTTCATATTCGTGAACATTACAGGTTGCAGACAAAAATAGTAAAGCAAACGAAAAGGGGAACGAAACACAAAACAGTGTATAAATGTACGATATGCTTAAAGTCCTTTCAGAAACCGAGTCAGTTGGTGCGGCATATTAGAGTGCATACTGGAGATAAACCTTTCAAGTGCACCGTGTGCGGGCGTGGATTCACGCAAAAGAGTTCGTTACAAACTCACACATGGCAACACAATGGTGTTCGGCCACATGCCTGTGAGCTTTGTAATGCCAAATTCAGCCAGAAAGGTAATTTAAACGTTCACATAATGAGAGTTCACAACGTCCCAGAAGGTGAACACATTTACGGATGTAATTATTGTTCGTGCGTATTTAAAAAGCTTGGCAGTTTGAATGGTCATATGAAACGTATGCACACCGATATAAACGAGGAGAATGCCACCGTTGATAGTACTCAGTCGGCTGATACTGTAGAATCTGACATTCGCGCAACCGTCGATAATGTTATAACTCAATTGGCGTCTTTGGAGTCGAGCGCAAATGAAACAACGAAGTCGTCAAATTTCGAATCGTGCATGTTAACGGAGAGTATGAGGAAAAAAGATATTCTGCAGCAAGCGCTGAGAAATAGCGGTCTTcctagtaaaaataaaataactgaaGGTACGTCAGAAACGAAAAGGTTCGAGGCTCGCACCAACTTTGTGACATTGCTGGATCGTGCACCTGACGGTGCTACGAGaaaatatttgacGATAAAACAACGGTGCGTAGGAAACGTAAGATGGTATGCGTGCATCTTTTGTCATAAAGAATTCAAGAAACCGTCAGATTTGATACGTCACTTGCGTGTACACACACAAGAGAAACCATTCAAGTGCACGTACTGTTATCGTTCGTTCGCTTTGAAGTCTACCATGATAGCACACGAACGCACCCATTCAGATGACAAAAGGTACGCTTGCGGTTCTTGCGACAAAACATTCGCCTACCATGGTAGCTTAATTGCTCACACCAGATTGCACGGAAAATTGGACAAGCGCTGTAACAAATCTGTTGGTAACGATAAGAATGACACCGATACGCGCGCGACAATCGATACCGATACTTATCACGGCAATCAGTCGAAAAGCCATACGACCAAGGGTAAATCAAAATTATCCCCGGAAGCGGAAAGCCTTGTCCCGCAAGTAGTTTTGCAGGAACCGCTGGTAATAAGCGATGCAGGCAACAAAATTTGCGTGGCTCAGGTACCTTCGAAGGAGAAACGCGTTTATGAAACGGCAGCTGATCCAGCTAGACCGCACAAGTGTTGGGTTTGTCAGGCGGCTTTCAGAAAGATCAGTCATTTGAAGCAGCATCATCGTCGCCATACGGGAGAACGTCCTTATAAATGCACAAAATGCGatagGAGATTCACGTCGAATAGCGTTCTAAAATCGCACTTGCATACGCACGAGGATTCGAGACCATACGGTTGTTCTATTTGTAATGCGAAATTCTCTACGCAAAGCAGCATGAAGAGACACTTGGTTACTCACAGTAATAAAAGACCATTCATGTGTCCATACTGTCACAAGACTTTTAAAACTTACGTCAACTGTCGGAAACATATGAAAATACATAAACACGAATTGGCACAACGGCAATTGGAACAAGAGAAAATTCGGATGCAAGAACAAGCTTCGGACAAGTCGAATTTGAAGGAAAATTGTAAAGAAGAAACGGCTCTCGAATCGTCTTGTACCTCCTCCGTCTCTATTACTACCATTGGTACCACCGCCACCAGCAACATCTCTGTCATTACCACTACCGCTGCTGCAGCTGCCAATCCAACCAAcactactaccaccaccaccaccaccaccaccaccaccaccaccagcgCTAACTCTACCATCGTCGCAACATCTTCTACGTTTTCAGATAATCTTCAGACACTTTCTCGTCTTGGATCAGTTGAAATATCGTTTCAACCGCAGCTCGGGACAGAGTTTTCGCAAACTTTTCCCGAGTTCGAAAGTATGACTGACGAAGAGAAGGGAAAGATAAGACCTGTTTTACCGACAAATTGCGAATCTACAACGTTTATTAATCAAAACGTATCGGGAATAGCGGTGACGAATCTAGAGAATTCGCACATGTTGCACGCCGAGGAAAGTGGTTCGGTTACGTTACCGGTTTACTCCAGCGATCAGACGCTCACTCCGGAGAGTATACGGGAAATCGAAGAAACGTTGAGTCAACAGTTTTTTAATATCGGGATGAATCTTAGTTTAGATTCAAGGCATTCGAACAATACGAATATCAACGATTTTGGTAATATAAAAGAAGAACAAACTCAACAGCAACCTGTGTTGAATATTATATACGAAAACAACAATAACAATGATAGTAATGAAAACGTGGGACCGTCCGGAGGGGATATTTTTGCGCGACAGTTAGATTCATTCGGGATAGATCACATTGCGTTGCAATCTGACGCTGAAATCGATATCGGATTGAATACAAATAATTCAACTAGTATGGCAAGTATATTACCTAGAAGCGTAAAAGAAGAGCATCGACTCTCAGTTTGCGTTACAACGCCGGATGATGCGAACGACGATCAATCGGGGAGATCTAGCGTCCAGACGGTAGTATTTATTTCTCAGCAGAATTTTCCAAGAAAAGAAAGTGGTACAGCGAATGAATTGGGAATAGAAGAAACGGATAGGGACAGTAGTGGTGACCAAGAACAATGTACAATCAATCCCATACTGTTGACAGAAGAGATTCGAGAAACATCTCAAGATTTCAAGATTCGTACAAACGTGCACAAGATGTCGTCCGATGATCCAGAAATCGTGAAAACTGCTGTTGGGAAAGTACCTCGAATAGGATCTAATCTGTTGCAATGTCATATGTGTAGTCGACAAGGATTCACAGCAGTCGGACTAAAGGAACATTTGACAAGTCATCGTGGAACGAAAGAATATCAGTGTACAGAATGCTCTTCGCGATTCTGCACGAACGGTGGATTAAACAGACATTCGAAGATACATATTATTAAACAGTCGTTCAAGTGTCCGTCGTGTGGGAAGCACTTTGATGATAGGATTCATCTGCGATCGCACAGTAAAATACACGAAAACCCGCTCTGGAATGctacatcttcgagaacgaacgAGGCTTCGGAAAATTCGACTGTTCCATTGGAAGTGCAACCGATCGCTACCAGTGATTCGCCGCAACCGTTGAACAGTGTCGCTATAGATCCGGATGCTGCCGTTTCCGAGAAAGTTCTCCTAGACACAGTGGCGGAGAAGGAAGTGATGGATCGAGTGGTAGAAAGTGCCTTGATggagaaaaaggaacgaaaggaGTACACAAACAAGTGCAAGTATTGTCCGAAAACGTTTCGCAAACCGAGCGATCTCATACGACATGTACGCACGCACACGGGGGAACGACCGTACAAATGCGACTATTGCAGCAAAAGTTTTGCCGTAAAATGTACTTTGGATTCGCACACGAAAGTTCATATCGGGAAAAAAACGTTTCGCTGCCATGTGTGCAGCAGTCTATTTGCGACCAAGGGCAGCTTAAAAGTTCATATGCGATTACATACAGGTTCGAAACCATTTAGATGCCCTATATGCGATTCGAGATTTCGAACTTCCGGCCACAGAAAGGTACACCTGTTGAAGCATGCACGGGAATATAAAGACAAtccaaaaagaaaacagaaacacATGAAAGTTGCGGCTATAGCCGAAGTAGCGGCGGATCTTGAAAAATGTGACGGTAGAGAAGGACAAACGAGCTGCTTCGAGCcggaacaacaacaacaacaacaacaggagCAGGAGCAGCAACAGTTCCAACAGGAACCACTATCGCAAACAGCCACAGGATATTCTCATTTGGAAACGATTAATATCGAGACGACCACTTCATGCTTATCCGATCAAATCAGCTTCGATACAGATGCTATTGTGCCGAATAACAATCAAACCATAGTGTctgtaaatgaaaataatcaGTTGGttacaaatttacattttcttctAACGAATGGACTTGTTACCATTCAAACTGAAGAATCATTATTGTCACAGTCAGGCACGAATTCGCATCATGACACGAGCATAATTCGTAATTCCGCGTGCGCATCAACGACGCTCGACGCCGGTACTGTAGTTGACATGAGCAGCAACACCGATACCACTAGCGCATACACCAAGGAAGAAATTCACATTGGACATATGTTGAAAGCGCAGTCGAATAATTGCCTGGTAAAAGTAGCTGGTTCGACGATGCAGCCGATGGAACCGTTACCCCCGGGGCTTTCTTCCCTCGAAAAATCTGTACCGGTAGTAGTAGGCAAATCAACAGCAGTTAAAGGaaattcctcgaagaaggaatgTGACATTTGCGGGAAAGCGTTTACGAAACCCTACCAAGTAGAAAGGCATAAACGAATTCATACGGGTGAACGTCCGTACAAATGTGATTTGTGTACGAAATCGTTTGCTCAAAAGTCAACTCTGCAAATGCATCAAAAACACCATACTGGCGACCGACCGTATGCTTGTCCGTATTGCGAATATTCCTTCACGCAGAAAGGTAATCTTCGAACGCACGTTAAACGCGTTCATCAGTTAGACACTGccgatatgaagaaatggaaatGCGTGCGTCAACCCTTTCTGCCGAAGATATCTTTTCAAGAAAACATGATCGAAGCTAAGAGCCTGAATCTGGAGGACATATCGTTTGTCGAGTGGTCTTAA
- Protein Sequence
- MKGKMLTRHNVITEPPHVEAIPINLVATEDGRTLLALTEHKDGMLEIVAAPVTFIGQSGTAASLIDVKSLNGNLILHSPVFQISVEDVIGGSELEQSMQNLETESDNAEHTKIHSYMDVKCKKTITQEYQYLSQNDPLTENEKSGNSPKQKSTSAIVRKNNPGRPKKNATHSLQGIESLKCDICQQEFVKQTLYRKHMENHAEEKPHRCPKCSASFNIPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWTSEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKIVKQTKRGTKHKTVYKCTICLKSFQKPSQLVRHIRVHTGDKPFKCTVCGRGFTQKSSLQTHTWQHNGVRPHACELCNAKFSQKGNLNVHIMRVHNVPEGEHIYGCNYCSCVFKKLGSLNGHMKRMHTDINEENATVDSTQSADTVESDIRATVDNVITQLASLESSANETTKSSNFESCMLTESMRKKDILQQALRNSGLPSKNKITEGTSETKRFEARTNFVTLLDRAPDGATRKYLTIKQRCVGNVRWYACIFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCYRSFALKSTMIAHERTHSDDKRYACGSCDKTFAYHGSLIAHTRLHGKLDKRCNKSVGNDKNDTDTRATIDTDTYHGNQSKSHTTKGKSKLSPEAESLVPQVVLQEPLVISDAGNKICVAQVPSKEKRVYETAADPARPHKCWVCQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSICNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQEKIRMQEQASDKSNLKENCKEETALESSCTSSVSITTIGTTATSNISVITTTAAAAANPTNTTTTTTTTTTTTTTSANSTIVATSSTFSDNLQTLSRLGSVEISFQPQLGTEFSQTFPEFESMTDEEKGKIRPVLPTNCESTTFINQNVSGIAVTNLENSHMLHAEESGSVTLPVYSSDQTLTPESIREIEETLSQQFFNIGMNLSLDSRHSNNTNINDFGNIKEEQTQQQPVLNIIYENNNNNDSNENVGPSGGDIFARQLDSFGIDHIALQSDAEIDIGLNTNNSTSMASILPRSVKEEHRLSVCVTTPDDANDDQSGRSSVQTVVFISQQNFPRKESGTANELGIEETDRDSSGDQEQCTINPILLTEEIRETSQDFKIRTNVHKMSSDDPEIVKTAVGKVPRIGSNLLQCHMCSRQGFTAVGLKEHLTSHRGTKEYQCTECSSRFCTNGGLNRHSKIHIIKQSFKCPSCGKHFDDRIHLRSHSKIHENPLWNATSSRTNEASENSTVPLEVQPIATSDSPQPLNSVAIDPDAAVSEKVLLDTVAEKEVMDRVVESALMEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHIGKKTFRCHVCSSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREYKDNPKRKQKHMKVAAIAEVAADLEKCDGREGQTSCFEPEQQQQQQQEQEQQQFQQEPLSQTATGYSHLETINIETTTSCLSDQISFDTDAIVPNNNQTIVSVNENNQLVTNLHFLLTNGLVTIQTEESLLSQSGTNSHHDTSIIRNSACASTTLDAGTVVDMSSNTDTTSAYTKEEIHIGHMLKAQSNNCLVKVAGSTMQPMEPLPPGLSSLEKSVPVVVGKSTAVKGNSSKKECDICGKAFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTADMKKWKCVRQPFLPKISFQENMIEAKSLNLEDISFVEWS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761108;
- 90% Identity
- -
- 80% Identity
- -