Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_951804975.1
Location
OX638117.1:25084120-25087236[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 4.7 3e+04 -2.1 0.1 6 19 162 175 161 178 0.85
2 6 0.48 3.1e+03 1.1 0.0 3 18 185 200 184 209 0.91
3 6 1.3e-10 8.3e-07 31.7 1.1 1 45 288 334 288 335 0.95
4 6 5.6e-05 0.36 13.7 0.8 3 43 344 388 342 391 0.93
5 6 3.5e-13 2.2e-09 39.9 0.0 1 45 397 442 397 443 0.97
6 6 2.5e-09 1.6e-05 27.6 0.1 3 37 452 486 451 490 0.85

Sequence Information

Coding Sequence
atgaacACACCGATTGATAACGATGGTGTTAACGATAACGATAAGTACGACGATGATCAGGATGAAAATGATAATAACGATGACGATGGTAATAAAGGTAAAAATGACGAAGATGTGGTTAAAATATTACTTGAAAGTGTAATGTCTTCCGAATATGAAAATGTACATCGTTGTGAAAATACTTTCGAGGCAAGTGACATCGTATCGATAAATAATTCTCAACTGTTTGAAAAATGTCTAAATGGATGTGATTTTATGGATTACGATATCGAAAATTGTAACGATATGTTGAATTTCAACAAACAGATAGTCTCCTCTTTGTTCGATTTAAAAAGGCACCTAACCTTTGCTCTTCAAAAATGTGAACGAAAATTAGCAGGAATAGAGAGAAGCTTACAAAAACATACAGCTGGAGATACAAAGGTTTTAATTTGTAATGCTGGCATGCCTTATTTCAaggatagaaattattttttcgcTTCTAATAACGAAGATGAAACGTTAAAGGAAAATCACAAAGAATTACAACTGAGAAGCCTTCCTAAAGTTTCTTCATggacaaagaaagaaagggacgtGTTTTCGCAAGcaataaaagaagaagtaaTCGCAGATATGCTGTCTTCTCAAAGAGTAGAGCATAAAAGAATCGATAACACATTAGCCCGATTAAAGATGAAAAttaaggagaaaaaggaaacgagGAAAAGGTATTCGCTTAAAGATTTAGAAGAAATGATCGGCCCACTGGAAGAAAGAGAATTCGATTGGTTTAAAATCTCTTCTGTTCATTTCGAAAATATACATTCCCCACTAGATTGTCGCGTCATGTGGAACGTTTTCCTTCATCCTCGCATAAACAAGACCTGCTGGACAAAAATGGAAGATAAGAAATTGAAGGAAATTGCAGAGAGGTGTAACTTACAAAACTGGGACAAGATTGCCAAAGAATTAAGTACACGTCGATCCGCGTATCAATGTTTCATCAGATACAACACAACAAAGAAATTGCCTAAAATTAGGAATTGCACTTGGGAGAACAAAGAAGACAAAAAACTGTTGAAATtgatagaaatatttcaaattggtGACTTTGTTCCTTGGGGCGAGGTAGCTAGTTGGATTCAACATAGAACTAAACAGCAAGCCTATTTTCGATGGATATATAGCTTAGCACCGTATCTAACAAAAGGTAGATTCACCAAAAGTGAAGATAATATTCTAAAGGATGCTGTTATCAAGTACGGTACAAATTTTCGTAAGATATCAGCTGCGTTGATGCCCAATAGATCTACGATTCAGCTTCACGATCATTATCAAACGTTAACTACCAATTTAGTAGAAAACTGGAATCGATGGACCCTCACGGAAGATGTAAAGCTACTAGATCTTTTTAAACGTTTCGGTCCAAATTGGTCTGCGATAGCTAAAGAATTTACGTGTAAAAACAGAACTCACTTGAGACATCGGCACGCAGCTTTGCAAAAGTATATCAAGAGGGGAGTTTCCCTGATTGAATTACATAGAAATTATCGTAACAACGAGAGCGaagtagaagaaaaagagaaagaaaaagagtcgTGCAGAGGTATGTTTGTACCTGGCGGTGAAGTAACAGACATGAATTGCAATAAAGATATAGACAAAGAAATACTCGAATACTTTTCTACAAAATACAAAACAGAATATTTTATCCATAAACGGAAACTTTATACTACGGAAAATTTGAAACATGCTACGACAAACTTATACAGCATTTTGCAAATATTGAACGCTAAACTTTCTATACCCGACGACATCAACGATATGAAGATAAACGAGAGGGATCGGCAACTTTTCTATTCGCTAAGAGAAcatatagaaatgaaaaatgatcgaaTTAGGTACTTTGAAGTTATCGATAAGTATAGATCGCGCATGTTCGGTACAAATGTAGCTAGAGAAGAAGATTCTCATTTCGTACCTCCATCTCCTTTCGACTCGcagatgaaatttaaaaagtcaAACAAGTGCCAATGCAtcgattataatttaaatacaaaGAATAACTTTTTGCTCGAAGAACAAATAGATTTTGATATTCCGCACTTTGTCATTTCTTACATCGGTGGTAACGAACAAGAATTACAATTTGAAAAACTTGGTCATTTGCTTCGAGTTGATAGTTCAAAGGGTGAACAACCCCATGATGTTCAACAGTTTTCCGTGTTACCAGAAGAGACGTTACAAGGGTATGTTAACGATAAAAATGGTTCAACTGGCAAGAAACCACCGAAACATATGAAACTTTCCGTTCGTTCCGACATTGCTGCCACATCTTTCGAAAGTGTCGGTAACGAATACCGTAACAAACTATGTGTACAAACTGTAAAAAAAGATAGCTATtccctaattagtaaagctgaaGATGTACACGCTTGGTCGATATCAGAAGGCATGGAAATAACTCGGAAATACGATACACCCATGATAGATGCTACCCATGCTTCTTTgttcagtttcaaaaatttaatgtaTCTAAGACAAATGAATGGAAAGtatagcagcagcagcagcagcagcagtaatagtagtagtagtagtagtagcagcagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagcagcagcagcagtagtagtagtagtagtagtagcagtagcAGCAGAAGTAGCAGTAACAGCagtagtagcagtagtagtagtagtggtggtagtagtagtagcagtaacagcagcagcagtagtagtagtagtagtagtagtagtaacaacagcagcagcaatgGTAATAGCAGCAGTACGAGTAATcgttttgataaattttttatacaagCAAACAAGTTTCAAGAAGCGCTTTATTTACTGGAAATACGTTTggaacaaatatttaaatacccaATTGGTTTGTCGAAAACTGTGTTACCGAAAGTTTATGCGATGGATACATTTTCATATGATGATAGTGCGCCGGATGGAATACCTCCCGAAGAgtcaaaattattagaaaagcaTAAATCAAAAAGAAAGTTACAATCGTCGTCAAACAGGAACGGTAAAAAACGTTTCAGATGA
Protein Sequence
MNTPIDNDGVNDNDKYDDDQDENDNNDDDGNKGKNDEDVVKILLESVMSSEYENVHRCENTFEASDIVSINNSQLFEKCLNGCDFMDYDIENCNDMLNFNKQIVSSLFDLKRHLTFALQKCERKLAGIERSLQKHTAGDTKVLICNAGMPYFKDRNYFFASNNEDETLKENHKELQLRSLPKVSSWTKKERDVFSQAIKEEVIADMLSSQRVEHKRIDNTLARLKMKIKEKKETRKRYSLKDLEEMIGPLEEREFDWFKISSVHFENIHSPLDCRVMWNVFLHPRINKTCWTKMEDKKLKEIAERCNLQNWDKIAKELSTRRSAYQCFIRYNTTKKLPKIRNCTWENKEDKKLLKLIEIFQIGDFVPWGEVASWIQHRTKQQAYFRWIYSLAPYLTKGRFTKSEDNILKDAVIKYGTNFRKISAALMPNRSTIQLHDHYQTLTTNLVENWNRWTLTEDVKLLDLFKRFGPNWSAIAKEFTCKNRTHLRHRHAALQKYIKRGVSLIELHRNYRNNESEVEEKEKEKESCRGMFVPGGEVTDMNCNKDIDKEILEYFSTKYKTEYFIHKRKLYTTENLKHATTNLYSILQILNAKLSIPDDINDMKINERDRQLFYSLREHIEMKNDRIRYFEVIDKYRSRMFGTNVAREEDSHFVPPSPFDSQMKFKKSNKCQCIDYNLNTKNNFLLEEQIDFDIPHFVISYIGGNEQELQFEKLGHLLRVDSSKGEQPHDVQQFSVLPEETLQGYVNDKNGSTGKKPPKHMKLSVRSDIAATSFESVGNEYRNKLCVQTVKKDSYSLISKAEDVHAWSISEGMEITRKYDTPMIDATHASLFSFKNLMYLRQMNGKYSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSRSSSNSSSSSSSSSGGSSSSSNSSSSSSSSSSSSNNSSSNGNSSSTSNRFDKFFIQANKFQEALYLLEIRLEQIFKYPIGLSKTVLPKVYAMDTFSYDDSAPDGIPPEESKLLEKHKSKRKLQSSSNRNGKKRFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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