Aplu118633.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- -
- Assembly
- GCA_951804975.1
- Location
- OX638128.1:1844929-1845240[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-09 3.9e-05 25.9 0.0 3 38 13 48 11 53 0.93 2 2 1 7.8e+03 -0.6 0.0 31 39 86 95 82 99 0.79
Sequence Information
- Coding Sequence
- ATGGATTCTGTTGAAAAACGTAAACAGTGGAATAAAGATCAGATGGTATTGGCTGTTAAAGCAATTAGAGAGCATATTATGGGCTATAAAACGGCGGCAAAACATTTTGTGGTCCCCAAAGAAACTCTCGAGCGGTATATGAAAAATACCGATTTAGGAGTATTATCTCGCAAGGTATACGCAAATGGAGAACAATTTGTTAGAAATGCAGAGCTTAAAAGTAGTGTAAAGCAAGCGTCAGCTAGCATAAGGATGTCGACGCTACAAACTTCAATTAAAAGCAGGAATGACAGAATTTCTCAAGTTATTTGA
- Protein Sequence
- MDSVEKRKQWNKDQMVLAVKAIREHIMGYKTAAKHFVVPKETLERYMKNTDLGVLSRKVYANGEQFVRNAELKSSVKQASASIRMSTLQTSIKSRNDRISQVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -