Agra071634.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anthonomus grandis
Gene Symbol
nfxl1
Assembly
GCA_030068095.1
Location
CM057955.1:9055298-9059532[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1 4.5e+04 -3.2 0.3 14 18 120 124 120 125 0.82
2 22 2 8.8e+04 -7.8 5.6 15 19 164 168 163 168 0.81
3 22 0.13 5.7e+03 -0.3 0.4 4 10 199 205 198 205 0.95
4 22 3e-08 0.0013 20.9 17.0 1 19 213 230 213 230 0.99
5 22 2 8.8e+04 -6.5 3.0 9 13 236 240 236 240 0.70
6 22 0.5 2.2e+04 -2.2 0.2 6 10 256 260 255 262 0.87
7 22 5.5e-05 2.4 10.5 19.4 1 18 266 283 260 284 0.85
8 22 1.4 6e+04 -3.6 1.0 6 10 309 313 308 313 0.88
9 22 1.6e-09 7.2e-05 24.9 11.5 1 19 319 337 319 337 0.99
10 22 2.1e-05 0.91 11.8 8.5 1 18 372 389 372 390 0.96
11 22 9.7e-07 0.043 16.1 18.5 1 18 424 441 424 442 0.97
12 22 4.6e-11 2e-06 29.9 14.2 1 19 451 469 451 469 0.98
13 22 0.23 1e+04 -1.1 2.1 5 10 497 502 497 502 0.93
14 22 0.041 1.8e+03 1.3 5.0 10 19 518 527 515 527 0.88
15 22 0.004 1.8e+02 4.5 5.2 4 12 539 547 537 547 0.90
16 22 1.3 5.6e+04 -3.5 2.7 14 18 573 577 573 578 0.90
17 22 0.069 3.1e+03 0.6 6.9 1 12 614 625 608 625 0.90
18 22 2 8.8e+04 -9.2 6.1 10 11 642 643 639 646 0.56
19 22 6.7e-06 0.3 13.4 16.6 3 19 655 671 654 671 0.94
20 22 2 8.8e+04 -6.5 3.0 9 13 677 681 677 681 0.70
21 22 2.9e-06 0.13 14.6 13.0 1 18 714 732 714 733 0.91
22 22 0.95 4.2e+04 -3.1 0.9 6 10 763 767 762 767 0.89

Sequence Information

Coding Sequence
atgagcaaaaacaAACCGAACCCgtggaataaaaataaacagcctCAAAACCCGCCCAAAAAGCGCCAACAAACGGGAAATGGTGACGTCTCGGGTAGGTCAAAGTTCCAAGAGGCCCAAATAAAGCTTCAGAGTGCCGTGGAGAAGCATCTTAAAGAGTACGAGTCTTCCTCTGAAGAAGAGGAGGAGAGCCTGGATATAAACTTGCTAGATAACATATTAAAGCAGTATAAAGCTACAGGGGGCACCAAAGATGGTACCATTAAAACAGAGACTTTTATTCAAGAAACTTTCCTATCTGGGGCAAACACTTGTCTCATATGTATTTCCAGGGTGAAAAGGGATGACAAGATTTGGAACTGCAAAAGTTGCTATGGGGCCTTTCACCTGGACTGCATTCAACGCTGGTCCAAAGACACGGTAATGCAACAGAAACAACGCATCCAAGACGAGGTGGCCCCTAATAAAGGACACCAGCTCTCCTGGTGTTGCCCCAAATGCCGCACCGAATACCCTTCCGACAATTACCCCGCGAGGTATCTCTGTTTTTGCGAAAAACGCGAGAATCCCGTTTACCAGCCGTTCGTGGTGCCGCATTCTTGCGGCGAAATATGCCGTAAGGATTTGGCACCCCCTTGCGGTCATAAATGTTTGCTTTTATGTCATCCGGGGCCGTGTCCGCCCTGTCCGGTGACGGTGCGGGTGACATGCCACTGTGGCACCCAAGAACCCTCCATAAGACGATGCTCCAATAAGGGGTGGTCCTGCCAGAATATTTGCGGGAGAAAGTTATCGTGCGAAAAGCACTCTTGCAGGCACACGTGCCATCCGGGGGAATGTCCACCATGCGAGAAGAAGAGCGTGCAGAAGTGCATGTGCGGAGGGCAACAGAAGTTGCGTGAATGCGCCGATCCGATTTGGCAATGCGATAAGGTCTGCGACAAACCGTTGGATTGCGGGAAGCACCGGTGCCAAGACGTGTGCCACGCAGGCGTATGCGATTCTTGTCCCCTCACCAAAACCAGATACTGCCCCTGCGGCAAGTCGTCGTATCTGCTTCCCTGTACCGAGGATACGCCGACTTGCGGAAGCACCTGTGATAAATTATTGGAGTGCGGAGTGCACACCTGTAGCTATCGGTGCCACAAGGACAAATGCGGACTGTGTTTGGAAATCGTAACGAAATCCTGCAGATGCACATTACACACCAAAGAACTCCAATGTTGCAAAACGTATTTTTGCGAGACCAAGTGCAAGAAGATGAGGGACTGCGGCAAACATCCTTGCAACAGAAAATGTTGCGACGGCAACTGTCCACCATGCGAAAAACCGTGCGGCAACACTCTACAGTGCGGCAACCACAAGTGCCAATCGGTCTGTCACAGAGGGCCTTGCTACCCCTGCCAGCAAACCAAAGAGCTCTCTTGCCGCTGCGGTTTCACTAAAATCACGGTGGTTTGCGGCAGAAAACTGAAGGTCAAACCCCCAAAGTGTCAACAGCCCTGTTTGATCCCTCCGGATTGCCATCACGAGCAACGCGTCAAACACCGCTGTCACTTCAACGAGTGTCCGCCCTGCAAACAGGTATGCGACAAGAAACAGATGAAGTGCGACCATCGTTGTCCTGCGCCCTGTCACTCCTTCGTCCTGGTCAAGATCGAGGAGAAGGCCAGCATGCCTTGGGAAAGATCCACTCAAGTTCAGAGGCAAAATTTGCCGTGTCCCGAGTGTGTCGTACCTGTGCCGGTAACTTGTCTGGGTGGCCATGAGACTGCCAACTATCCGTGCCACTTGGCCAAACCATCAAGCTGCGGTCGTGCGTGCGGACGTCAATTGCCGTGCACGAATCACGCGTGCACACTGGAATGTCACACCGTTATTGGTGCCGGGGACGATATACACGGTGGGACAAACTGTGAGGCTTGTCACCATCCTTGCGTCAAACCCAGACCAGAAGGGTGCAACCATAGATGCCCCTTGCCGTGCCATCCCGGCGTTTGTCCACCCTGTAAGCAGATGATCAAGATCACGTGCCACTGTGGACTGTCGCAGCCGTATTTCCGATGCGCGGACTGGTTGCAAGTGGACAAGAGAGAGGAGCTGAAGAGTTGCGGAAATCAGTGTCCCAAAACTTATGATTGCGGACACCGCTGCAAGTCCAACTGCCACTCGGGAGAGTGCCCCAAAGAGGTGTGTAAGAAGAAGGTCAAAGTCACGTGCAAATGCAAGCGGATCAAAAAGGAGTTTCAATGCGATACGGTGAGGAATAATGGGGCATTGGTCGAGTGTGACGAGGTTTGTCTTGAAAAACAAGCCGAGGAACTGAAAAGGAGAGAGAAAGAAGAACAAATCCGGCTGCAACAAGAAGAAATGAAGAACCAGAAAGACCTAGAGGAGTATCAGAAGAAATTTAGTAAGAAAAGTAGGAAGTTTCGCAAAAACGACCAGGGGGAGCAAGAGGAGACGAGTTTCTTGAAGAAGCACTTGGTGCTGCTGATGGGGACCTTGTTGGTAGCGGTCACGTCACTGGTGGCCTACCAGACATTtgtaaattaa
Protein Sequence
MSKNKPNPWNKNKQPQNPPKKRQQTGNGDVSGRSKFQEAQIKLQSAVEKHLKEYESSSEEEEESLDINLLDNILKQYKATGGTKDGTIKTETFIQETFLSGANTCLICISRVKRDDKIWNCKSCYGAFHLDCIQRWSKDTVMQQKQRIQDEVAPNKGHQLSWCCPKCRTEYPSDNYPARYLCFCEKRENPVYQPFVVPHSCGEICRKDLAPPCGHKCLLLCHPGPCPPCPVTVRVTCHCGTQEPSIRRCSNKGWSCQNICGRKLSCEKHSCRHTCHPGECPPCEKKSVQKCMCGGQQKLRECADPIWQCDKVCDKPLDCGKHRCQDVCHAGVCDSCPLTKTRYCPCGKSSYLLPCTEDTPTCGSTCDKLLECGVHTCSYRCHKDKCGLCLEIVTKSCRCTLHTKELQCCKTYFCETKCKKMRDCGKHPCNRKCCDGNCPPCEKPCGNTLQCGNHKCQSVCHRGPCYPCQQTKELSCRCGFTKITVVCGRKLKVKPPKCQQPCLIPPDCHHEQRVKHRCHFNECPPCKQVCDKKQMKCDHRCPAPCHSFVLVKIEEKASMPWERSTQVQRQNLPCPECVVPVPVTCLGGHETANYPCHLAKPSSCGRACGRQLPCTNHACTLECHTVIGAGDDIHGGTNCEACHHPCVKPRPEGCNHRCPLPCHPGVCPPCKQMIKITCHCGLSQPYFRCADWLQVDKREELKSCGNQCPKTYDCGHRCKSNCHSGECPKEVCKKKVKVTCKCKRIKKEFQCDTVRNNGALVECDEVCLEKQAEELKRREKEEQIRLQQEEMKNQKDLEEYQKKFSKKSRKFRKNDQGEQEETSFLKKHLVLLMGTLLVAVTSLVAYQTFVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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