Agra068992.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- pnr
- Assembly
- GCA_030068095.1
- Location
- CM057954.1:7516524-7529789[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.027 3.5e+02 3.1 0.0 4 17 41 54 39 58 0.87 2 3 3.7e-18 4.6e-14 53.9 3.2 1 34 157 189 157 191 0.97 3 3 2.7e-19 3.3e-15 57.6 5.8 1 35 211 244 211 245 0.98
Sequence Information
- Coding Sequence
- ATGGATGATATATTTACTCTAAGTCCTAGAGCTCGTCAGGGCTCCGTGCTTGGCCGATTTTTATTCTTTCCCTATATTATTGACCTTGCATCTTTTGATATAAGAAGTCGTTTCACAATTTGTGCAGATGACACAACCATTCTATGGACTCATAATGATCATGAGCTATTAATGGAAAATGTAGCAGAGGACTTAAGTAGAGTTAAGCAATGGTTTAATTCTAATCTCAGGTCTTTAAACATAAgtaccACCCCTCACCAAAACGCGTGGCACACTGGTACAGGCTACGCAGAAATGACCCCCACCGCTCACACCCTCGGTGCTACCGGTCACCACGCAGGCGCACTCGCGGCCGGACAATTTTACGCTCAAAACATGATGATGAGGTCATGGAGCGCGTACGACGGAGGCTTCCAAAGAGGCTCTTACGatcCTACAATGGAATTTCCTTTTGGAGAAGGAAGGGAGTGTGTGAATTGTGGAGCTATATCAACTCCTTTATGGAGGCGAGATGGTACGGGACATTATTTGTGCAATGCTTGTGGGCTTTACCATAAAATGAACGGTATGAACAGGCCTTTAATTAAACCTTCAAAAAGACTGACAGCTACAAGACGCTTAGGACTATGCTGCACCAATTGTGGCACCCGCACCACGACGCTATGGCGTCGCAACAACGACGGTGAACCAGTATGTAACGCATGCGGACTCTACTTTAAATTACACGGTGTGAACCGACCGTTGGCCATGCGTAAAGACGGCATCCAGACGAGAAAACGAAAACCGAAAAAACCGGCCGGATCGGGGGGTAACGGAGGGTCGTCGACGACAAACGGTGGTGGAGAGAGGGAGGATAGCAACCACGCCCAAAGCGAAGAATCAAAATCGACAAACCTTCCTCATCAACAGTCTCCTACTCATCACGCCTCAAATCATCAGCAACAGCAGCTGCAACCTCAAAACTCGTGCCAGTCTCAAAATATCCCACACCAAACCACCCACCACGAAAAGTCACCTCTTAGTCAATATGGTAGTACTTCAGAACGACCGTACCTCGGTCAAACGTCACTGTTACCGGCTACTAGTACAAGCAGTATAAAAAGTGAACCTGGATACGAGTATAGTTGCCTTCAAAGTCAACCAAGCTACCCCTACCAGCAGCTTTTTGGGTTCCCTAGTCCTTCAGGCAACAGCGAAATGGCCTACCACCACCAGCACCACGTAACTGCCGCGGCAAAACTAATGGCTTCGTCATAG
- Protein Sequence
- MDDIFTLSPRARQGSVLGRFLFFPYIIDLASFDIRSRFTICADDTTILWTHNDHELLMENVAEDLSRVKQWFNSNLRSLNISTTPHQNAWHTGTGYAEMTPTAHTLGATGHHAGALAAGQFYAQNMMMRSWSAYDGGFQRGSYDPTMEFPFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPAGSGGNGGSSTTNGGGEREDSNHAQSEESKSTNLPHQQSPTHHASNHQQQQLQPQNSCQSQNIPHQTTHHEKSPLSQYGSTSERPYLGQTSLLPATSTSSIKSEPGYEYSCLQSQPSYPYQQLFGFPSPSGNSEMAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00830832;
- 90% Identity
- -
- 80% Identity
- -