Agra071695.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- -
- Assembly
- GCA_030068095.1
- Location
- CM057955.1:9352022-9359178[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 1.7 4.5e+02 3.8 0.3 2 20 15 33 14 35 0.94 2 24 1.6 4.3e+02 3.9 0.1 2 23 43 65 42 65 0.92 3 24 0.24 63 6.5 1.4 1 23 79 102 79 102 0.94 4 24 0.9 2.4e+02 4.7 5.7 1 23 106 129 106 129 0.96 5 24 0.13 35 7.3 5.0 1 23 685 708 685 708 0.94 6 24 2 5.3e+02 3.6 0.1 1 23 726 749 726 749 0.89 7 24 1.4 3.8e+02 4.1 2.3 3 23 756 776 753 776 0.89 8 24 0.6 1.6e+02 5.3 3.3 1 23 784 806 784 806 0.97 9 24 0.00027 0.07 15.8 0.7 1 23 844 867 844 867 0.95 10 24 0.053 14 8.6 0.9 3 23 891 910 890 910 0.97 11 24 0.06 16 8.4 0.2 2 19 1389 1406 1388 1408 0.93 12 24 0.72 1.9e+02 5.0 3.7 1 23 1423 1446 1423 1446 0.96 13 24 7.3e-05 0.019 17.6 1.1 2 23 1469 1490 1468 1490 0.97 14 24 0.1 27 7.7 2.0 1 23 1717 1739 1717 1739 0.97 15 24 1.3e-06 0.00034 23.1 1.7 1 23 1892 1914 1892 1914 0.98 16 24 1.1e-05 0.0028 20.2 1.4 3 23 1921 1941 1919 1941 0.95 17 24 0.0056 1.5 11.6 0.3 1 23 1947 1970 1947 1970 0.92 18 24 0.0016 0.42 13.3 2.6 1 23 1976 1999 1976 1999 0.91 19 24 0.00016 0.041 16.5 2.2 2 23 2005 2026 2004 2026 0.97 20 24 0.02 5.1 9.9 2.6 1 23 2035 2057 2035 2057 0.98 21 24 3.9e-06 0.001 21.6 1.4 2 23 2064 2085 2064 2085 0.97 22 24 1.2e-05 0.003 20.1 3.1 1 23 2091 2113 2091 2113 0.97 23 24 7.9e-06 0.0021 20.6 2.1 3 23 2121 2141 2119 2141 0.97 24 24 0.037 9.7 9.1 2.0 1 20 2147 2166 2147 2168 0.94
Sequence Information
- Coding Sequence
- ATGGCTGTGCAAGAGCAAACCTTTAAGCCATCcaagaaaatttattgtaacttGTGTCCTTTCTCCACCGAACACTTCTCCTTGTACGAAAATCACATATTCGCCTCCCCGGATGACCATAAAGTGTCTTGTCCACTTTGCAACCTCGAATTCGTCTCCATAGGGCTCCTCAATTTTCATGTTTTAACAAACCACGAATTGAACGAGTTTAAGGCTGCAAAATCAGGAACTATATTCTATTGTGAGTTTTGCGGGCAACAGTTCAACAAGTTGGTTGCCATGTGCGATCATAAGTCCGTGGCCCATAAGTCGTACTTCGAATGCCTCATGTGCCCTAAAAAGTGCTTTGACCTGCACACCTTATTCAATCATTTCCAAAAAGAGCACGCCCTGGTGAACAACGTGGATCTGGTGTGCGAGGAATGCGATAGCCAACATTACTTTTGTCCAGCCGCTTTCAAAACGCATCGCCAACTCCTCCATGGACGTCAGGACGTTCTGTTCAAGTGCTTCATGTGTCTCAGTGAGTTGAATGATGTGGAGGAATTCAAGCTCCATGTACACACCCATAGGAAGTACCATAGAGGAGTCGAGGCCAAGTTTCCAGATGGTGCGTTTCCAATGCAAAACGGACGTCCGATCGGGAATGTGCGATTTAAGCAATGTTACGTGTGCGGTGAACTCTCGCATTACATCAAAAAGCACATGAAGCATCATTTTGAGGTCAAAAGGTGCCTGACGTGTCACGACTTCGTTTTGAGGGACCAACTGGACCAGCATCAGGAGGATCATAAAAACGTGCTGAGGCCTTACATGCTTCTAGAGCAAGAAGAAAAGGGACTGGAACCGCAGCAGTTCTGTTACACCTGCCTCTCGTTTGTCAGACTCTATAGATTTGCAGAACACGAGGGTCAACATCGTTCGATCGGATTGACCGTCCACGAACATCCTCCTATAGAGTACGAGAAATACTCAGACCTCACCGATGTCCTTCAGGGATGCGGGATTGTTTCGTGTAACACCTGCAAGCGGAATGTGCCAACGGACTTGACTTATTTACATCTGGATGTGCATAGGATTGAGTCCCCACACATGGCTGAGCAACAACGAATGCTTCTTGTCTTTAAGAAAGCTAAGATAGCTCCACCAGCGGTACCTCAGCCAGTAAACGAGCCTAAAAAAGGAGAGACAGTTGGATGTCCAAAAAATCCGGAAAATAAGTATTGGAAATATCTACAAGCAAACAAGCTTAAGCAAAAGGGACAGAAAAATGATGCAAACATTTTTAGCAAATCTACGTCAAACATCAAGCAAGAACCGACAGCTGTCGCAACAGAAGATATTAAGAATAAATCTCTCACCACAAACGAAGATACTAAGGAAGAACTCTCTCAGGAAGATAAGAAATCAAATATATCTCCCAATAATGTTGACCAAAGCAAAGCCGTAAAGCAAGAACCAGATACAAAACTCGAATTTGACGACCTGCTTACCCAATTGGAAAATGTAATGGCAGAGGTTCCTCTAGATGACAAAAGTCAAATAGAAACGCTTTGCCAAGACTTATCTGCTGAGCTTGAGGAGAGAATTGAAAGGTCAATGTGTACTGAAGCTGCCCCAGAAACAGGTAATAGTGAGGTATCGTCAACTGATGATGCTACTACAGTTTCCAAGGAggtcattaaaaataaagaagtaaaGCAGTTAGTAGTTCGTTTAGAGAGATTTGATGAAACTGTTGAAGAAAAAGAGACTTCGTCAGCTGTGGAAGAGGCTTCCGCCCAAACGATTGAAGAAGTTTCAAAAGTTGTAGATCTTACAACTGGAGACGGAGGTTCTATTATAGGTAATCCGAGGAAACGCAGACCCGCTCCTAAAAAACTGGTTGTCAAAGTCAAGAGGCTGCTGAAGCACCATAAAGGACATCCTTCCAAGGCACCCAAAGTTTCTCTCAAGGTGCGGAGGCAATTTTATTGCGAAATCTGCGCCATGACCTTCACCTGTTTCAGACGTTACTGGAACCACAAGACTCTACTGCACGAAAACCACACATTTAGCTGCTTGAGTTGCAATAAGCAGTTTAAAAAAACGTCCGCTCTATTGCACCACACCAAGTTTCAGCACAAGAACGTCACCGAGACCTCTGACGATAAAGAAGAGACCAAAGAGGCTTTGTTTTATTGTGAGGCTTGTGGCCTTGGGTTCAGGAATATTCGCAAAAGGGTCGCCCATATTGAGGCCAATCATCCCGACGGTTATATATGTTGTTCAGTTTGTAATCGTGCGTGTTCCAGCGCGGAAGACCTTGTCTTCCACACGAAAGAACACGGGGATCTTAAGAGAACTTTGTTTAACTGTAAGGTCTGCAGTCGGGACTTCTACTTCTTGCAAATGTTCGTGCACCACCTCGAATCCCACCGTAACGTGACGTCTCCCAAACATTTCACTTGTAAAGTTTGCTTCGGTAGGATTCACAATTTCACCAAGTACCTCAAACATATGCAGAAACACTTTAAAACTTCTTCAATCTTCAATTGCTTCATTTGCCCAATGACTTACCGATCCAGCGGTAAGCTGGAGAGGCACATGAGCTACGTTCATAGTAAGCAAGTCGCTAACCATAAAGCGTTTTTGACCAACGTAAGTAAGGTAAGTAAGGAGTTCAAGGCATGCTACTGGTGCGGCCTTTCCTTTCATAAGAATCAGTTGGCAGACCACGTCAAATCACATGCGGTCCCTAGGGAGAATCTTGTGAATTGTAGGGTTTGTTTGAAGAGCGTTAAGTGCTGGAGATACCCAAGCCACTTGGCCAAACATGTAATTGCTTCTAGGAAGTTGAGAACCAAGATTGGTGAAGGAGAAGATGCCTCTTTGGTCGTACTTGATGATGAATCTGCTAAAGAAATTAAGAAACTTGCACCTGAAGGGTTCAATCTCGAATCCCCTAGCAAGGCAAGCTCTGATAAGAAGAAGCTAGCCGAAACTGCATCTACTAATAAAGACGAGAGTAAAAAAACTGACACGTCAGATAAATCCGATAAGGAAAGGGATAAAATGAAGAAGTCGTTTGATAGCACCAAGAGACCAGAAGATAGACCAATGAAATCTGATTTTATTAGCAAAGAAAGCGATGACAAGAAGAAGCACTCTACTTCAAATGAGCCACCAAAATACAAGCAAGGCTTTCAATGCAGCAACAAATCTAAGGAAGCAGAAGTTAGACAAGGAACACCTGCATCccttactaaaaaaatcaataataagaaCAAAAAGCCTGCTCCATCTGCTCCTATCAAGACACAAAATAAGGCAGTTCCCTCTCCAAAGAAAACATCTGATCAAACATTGcaattcaaagaaaaaatatcaaaaggaAAATGGGACGTAGGGCCAATATATGATATGAAACCGAACAAAAAACgacaaagaaataaagaaaaaaaaaattctcgcTTTAATCCCACAGAACCATCGCACTTCATGTCACCTGCTTTCATGCAACAACAGCAGTATGGTAATGGAGCATCATACTTTCCAGAAAATCCAATGGTTCCAGGAGTTCCAGGAGATCCAATGGGTCCAGGTGGTCAAATGGGTCCAGGTGGTCCAATGGTTCCAGGAGTTCCAGGTGGTCCAATGGGCCCAGGTGGTCCGATGGGTCCAGGAGGTCCGATGGGTCCAGGAGGTCCAATGTATCCTGGAGGTCCAATGGGTCCAGGAGGCCCAATGGGTCCGGGAGGTCCAATGGGTCCAGGAGGCCCAATGGGTCCAGGTGGTCCAATGGGTCCGGGAGGTCCAGGAGGGCCGATGGGAGCAATGGGTCCTCCGGAAGGGCCAATGGGGTCAGGTCACATGAATCAAGGCTACATGGGTCCAGGGCCAATGAATACCATGATGCCTAATCAAGGATACGAAATGCCCATGTACAATAACCAACCGATGGATCCATCAATGTATGGTCAGCCAATGTATGCCGGAAACCAGTACCAGGCCGGATATTTTAATCCAGAAATGCAGTACGGGAACCAAGGGATGCCATATATGGACCCCAATCAGTACAATTATAATCAGCAGCAGTACAATCAGCAAATGAACCAGTGGCAGGGCGGGTCGCAGGCGCAGATCATGCAGAAACCGGTCTTCTTCGGTTCGTCTAGCGGTACGACCTGCAGGGGGTGCTCGAAGCGTTTTAGCACCTCGAAGGTACTGGCGGTACACGAGATATTTTGCGTGAAATTAGTGAACGAGCTATCGCTGCCGAGTCTCCATCATTGTCCGATCTGCATGCAGAAATTCGGCAGTTTGTCGACGATCAAGCAGCATATGTTTACCTCGCATGCCCAGATATTCAAGGAGTTCAACTTGATCTCGGGGAAAGATGCCCAAGGTGCTAATACTCTCAAGGAGTGCAAGACGTGCAAGCAAACATTTAAGAACAAGGACGAACTTGCTGCCCACGAGATGACCCACGAGTTCCTGGCTTCTATCAGGTCCGATTTGGAGAAAGTTGATGTGAGCAAATGCTTGATGGGAAAGCAGCCTCCTCAAAACCCTAAACCAGCGACAGTGACGTCTGGCAGCACCGTtcaaaacccaaaaaaacccACACGATTCGAACATTTACCAACAAAATCATCTGACAGAGAGAAACCTGCAAGCTTCAGTAAGCGCTCGCCCCCAAGAAGAGTGTCTCCCAAACCATCCACATCCACTTTCACAAAATCCGAAACTTCAGAAGCCCTGAAGAAGGTCGCGCaggataaacaaaaaaaaatgctggacgAGATGCGCAGTGGCTCATTCAAAGCCAAACTGGAGCAGCAGAAGAAGAAGCTCAAGATCAACCTGTTGTATTACCAAAAGCAGAAGCTCGAGGAAGAGAAGAAGGCGAAGGCCTTCGAAATGTTGAAGGCCGACGAAGAGCTGAAACGCCTCCAGAAGGGCCTCTTGATTTCTCAGAAGTCGCAGATGCTTGACGTCATTGATCTGGTAGATAGAACCTCTAGCTCTCGAGAGCGCAGACGTTCTCCAAGAAGATCTCGTTCCAGGGAACGCAGCGGGAAAAGGGTAGAGTCTCCTAGACCCAGCACTAGTGAGTCATCTACAGTTCGCAAGCTAAACCTGCAGCCTGGACAAGAAATGGGGGCGTACCAGTGCAAAAAGTGCGCCACCTTATTTACCAACTACCGAGACTATATCAACCATACGGAGCAGCACGTGGATGATGACGATATGGAGGAAAACTACCTAACGCAAATGCAAGACTCTGGCGAAGGCGTTCTTCAACGCAAGGAGGATTATGTCGTTAAGCGTAAATCTCCAGAACGTAGACGTAGGTCTCCGGAAGAATACAGATCCAGACGTAGAAGCCCTGAAGGTTCTCGATCCAGGCATCGATCTCCAAAAGATAAAAGACGTAGACGCAGATCTAGATCTAGCGAGAGATCGTCGAGGTACACGCCAGCGGAGATGCTTCAAAAATCAGTGGTCAGTCCGTTCTTGGTCCAGACAGGTACTAGTGCCCGTTCAAAATCTTTGGCAACGTCTTACCCCAACGTGCAACAAAACATCGAGCATGTTTCCACGGCGGTTAGAGTGAGATGTCAGGTGTGTTTGCAGGAGTTCCCTAGCCAGATTTATCTGGATTATCATACGTGTCCCGGACCGTTTTATTTTCCATGTGATTATTGccagaaaaaatttatttcctcCAACCAACTCAGGAGACACATTCAGACTCACAAGGATAAACTGCTGGCGTGCCCCCACTGTAATAAAACCTTTGAGACAAAACGCCTACTGAATCGTCACATATCGGGGCACGTCGGTATGATCACTTACGCGTGTGAGTTCTGCGAAAAATCGTTTTCTCAAGCCACGATACTGAAGCGCCACGTAGACAACGTGCACTACAACCAGTTCAAGTATCCCTGCGACGAGTGCGACCGCGGCTTCAACTTCAAATACGAGCTTCACAAGCATCGCGCCTTCAAACATTTCGGCATGAAGCTCACCTGCGACGTCTGCCAGAAATCGTTTAAAAACGAGCAGTACTTCAAAGAGCACCAGAAATCCCACGATCCGGAGTACCGTAAGCAGGAATTCACTTGCGAGCTCTGCCTCAAGGTGCTGACCCACGTGAAATCTTACAAAGTCCACATGAAGTCGCACACCGGTCAGGTGGCGAACGTGTGCGACATCTGCGGCAAGAATGTCACCTCGAAGGCGAGTCTGAGGCACCACATGCGCACCCACACCGGCGAGAGGCCGTTCCAGTGTCACGAGTGTGGTAAAAACTTCACCACCAGGAACCTGCTGAAGACCCATAGGGTGGTGCACACCAAAGAGAAACCCTACGGGTGTCGGGTGTGCGACAAGAGTTTCACCCAGAAGGGAAGTCTCACCATTCACATGCGCCATCACACCGGGGAGAAACCGTACGAGTGTCAGTTTTGTGAAAGGAGTTATATCTCCAGGACACTACTCAATAATCACAAGTGTTTGGCTTaa
- Protein Sequence
- MAVQEQTFKPSKKIYCNLCPFSTEHFSLYENHIFASPDDHKVSCPLCNLEFVSIGLLNFHVLTNHELNEFKAAKSGTIFYCEFCGQQFNKLVAMCDHKSVAHKSYFECLMCPKKCFDLHTLFNHFQKEHALVNNVDLVCEECDSQHYFCPAAFKTHRQLLHGRQDVLFKCFMCLSELNDVEEFKLHVHTHRKYHRGVEAKFPDGAFPMQNGRPIGNVRFKQCYVCGELSHYIKKHMKHHFEVKRCLTCHDFVLRDQLDQHQEDHKNVLRPYMLLEQEEKGLEPQQFCYTCLSFVRLYRFAEHEGQHRSIGLTVHEHPPIEYEKYSDLTDVLQGCGIVSCNTCKRNVPTDLTYLHLDVHRIESPHMAEQQRMLLVFKKAKIAPPAVPQPVNEPKKGETVGCPKNPENKYWKYLQANKLKQKGQKNDANIFSKSTSNIKQEPTAVATEDIKNKSLTTNEDTKEELSQEDKKSNISPNNVDQSKAVKQEPDTKLEFDDLLTQLENVMAEVPLDDKSQIETLCQDLSAELEERIERSMCTEAAPETGNSEVSSTDDATTVSKEVIKNKEVKQLVVRLERFDETVEEKETSSAVEEASAQTIEEVSKVVDLTTGDGGSIIGNPRKRRPAPKKLVVKVKRLLKHHKGHPSKAPKVSLKVRRQFYCEICAMTFTCFRRYWNHKTLLHENHTFSCLSCNKQFKKTSALLHHTKFQHKNVTETSDDKEETKEALFYCEACGLGFRNIRKRVAHIEANHPDGYICCSVCNRACSSAEDLVFHTKEHGDLKRTLFNCKVCSRDFYFLQMFVHHLESHRNVTSPKHFTCKVCFGRIHNFTKYLKHMQKHFKTSSIFNCFICPMTYRSSGKLERHMSYVHSKQVANHKAFLTNVSKVSKEFKACYWCGLSFHKNQLADHVKSHAVPRENLVNCRVCLKSVKCWRYPSHLAKHVIASRKLRTKIGEGEDASLVVLDDESAKEIKKLAPEGFNLESPSKASSDKKKLAETASTNKDESKKTDTSDKSDKERDKMKKSFDSTKRPEDRPMKSDFISKESDDKKKHSTSNEPPKYKQGFQCSNKSKEAEVRQGTPASLTKKINNKNKKPAPSAPIKTQNKAVPSPKKTSDQTLQFKEKISKGKWDVGPIYDMKPNKKRQRNKEKKNSRFNPTEPSHFMSPAFMQQQQYGNGASYFPENPMVPGVPGDPMGPGGQMGPGGPMVPGVPGGPMGPGGPMGPGGPMGPGGPMYPGGPMGPGGPMGPGGPMGPGGPMGPGGPMGPGGPGGPMGAMGPPEGPMGSGHMNQGYMGPGPMNTMMPNQGYEMPMYNNQPMDPSMYGQPMYAGNQYQAGYFNPEMQYGNQGMPYMDPNQYNYNQQQYNQQMNQWQGGSQAQIMQKPVFFGSSSGTTCRGCSKRFSTSKVLAVHEIFCVKLVNELSLPSLHHCPICMQKFGSLSTIKQHMFTSHAQIFKEFNLISGKDAQGANTLKECKTCKQTFKNKDELAAHEMTHEFLASIRSDLEKVDVSKCLMGKQPPQNPKPATVTSGSTVQNPKKPTRFEHLPTKSSDREKPASFSKRSPPRRVSPKPSTSTFTKSETSEALKKVAQDKQKKMLDEMRSGSFKAKLEQQKKKLKINLLYYQKQKLEEEKKAKAFEMLKADEELKRLQKGLLISQKSQMLDVIDLVDRTSSSRERRRSPRRSRSRERSGKRVESPRPSTSESSTVRKLNLQPGQEMGAYQCKKCATLFTNYRDYINHTEQHVDDDDMEENYLTQMQDSGEGVLQRKEDYVVKRKSPERRRRSPEEYRSRRRSPEGSRSRHRSPKDKRRRRRSRSSERSSRYTPAEMLQKSVVSPFLVQTGTSARSKSLATSYPNVQQNIEHVSTAVRVRCQVCLQEFPSQIYLDYHTCPGPFYFPCDYCQKKFISSNQLRRHIQTHKDKLLACPHCNKTFETKRLLNRHISGHVGMITYACEFCEKSFSQATILKRHVDNVHYNQFKYPCDECDRGFNFKYELHKHRAFKHFGMKLTCDVCQKSFKNEQYFKEHQKSHDPEYRKQEFTCELCLKVLTHVKSYKVHMKSHTGQVANVCDICGKNVTSKASLRHHMRTHTGERPFQCHECGKNFTTRNLLKTHRVVHTKEKPYGCRVCDKSFTQKGSLTIHMRHHTGEKPYECQFCERSYISRTLLNNHKCLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -