Basic Information

Insect: Anthonomus grandis
Gene Symbol: RREB1
Assembly: GCA_030068095.1
Location: CM057941.1:27746905-27751536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00017 0.043 16.5 0.6 1 23 51 73 51 73 0.99

2 15 2.8e-05 0.0074 18.9 0.2 1 23 87 109 87 109 0.97

3 15 1.4e-05 0.0038 19.8 4.1 1 23 115 137 115 137 0.98

4 15 0.038 9.8 9.0 0.4 2 23 225 247 224 247 0.95

5 15 6.2 1.6e+03 2.1 4.6 1 21 292 312 292 313 0.93

6 15 0.082 21 8.0 0.1 1 23 449 471 449 471 0.96

7 15 1.7e-05 0.0044 19.6 0.8 1 23 480 502 480 502 0.99

8 15 0.00095 0.25 14.1 3.1 1 23 508 531 508 531 0.97

9 15 0.00069 0.18 14.5 3.1 1 23 911 934 911 934 0.97

10 15 0.00077 0.2 14.3 0.6 2 23 1145 1166 1144 1166 0.97

11 15 0.14 37 7.2 6.3 1 23 1172 1195 1172 1195 0.97

12 15 3.9 1e+03 2.7 4.8 1 20 1225 1245 1225 1249 0.93

13 15 0.62 1.6e+02 5.2 1.0 1 23 1314 1337 1314 1337 0.91

14 15 0.014 3.7 10.4 0.2 3 23 1386 1406 1384 1406 0.94

15 15 0.0036 0.96 12.2 5.1 1 23 1412 1434 1412 1434 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00017	0.043	16.5	0.6	1	23	51	73	51	73	0.99
2	15	2.8e-05	0.0074	18.9	0.2	1	23	87	109	87	109	0.97
3	15	1.4e-05	0.0038	19.8	4.1	1	23	115	137	115	137	0.98
4	15	0.038	9.8	9.0	0.4	2	23	225	247	224	247	0.95
5	15	6.2	1.6e+03	2.1	4.6	1	21	292	312	292	313	0.93
6	15	0.082	21	8.0	0.1	1	23	449	471	449	471	0.96
7	15	1.7e-05	0.0044	19.6	0.8	1	23	480	502	480	502	0.99
8	15	0.00095	0.25	14.1	3.1	1	23	508	531	508	531	0.97
9	15	0.00069	0.18	14.5	3.1	1	23	911	934	911	934	0.97
10	15	0.00077	0.2	14.3	0.6	2	23	1145	1166	1144	1166	0.97
11	15	0.14	37	7.2	6.3	1	23	1172	1195	1172	1195	0.97
12	15	3.9	1e+03	2.7	4.8	1	20	1225	1245	1225	1249	0.93
13	15	0.62	1.6e+02	5.2	1.0	1	23	1314	1337	1314	1337	0.91
14	15	0.014	3.7	10.4	0.2	3	23	1386	1406	1384	1406	0.94
15	15	0.0036	0.96	12.2	5.1	1	23	1412	1434	1412	1434	0.98

Sequence Information

Coding Sequence: ATGGAAGAACCCCATCAACCGACAAACCCaaccaaagaaaaaatcaaCCAAAGCGACTCAGGAATCTTCTCAGCAACGAACACCACCATCGACCAATCGACCACCTGTGAAAGTGACAACCGTAGCGACTGCAGCTCACCGGAACGCAAATACGTTTGCCCCATCTGCGACATCATCCTGACCTCACAGCATAAGTTTACCCTCCACATCAGATCTCACAATAACGATCAAGACCAAgatcaagtgcctgaaaaagGCTTCGTTTGTAAAATCTGCAATAAAGTCTTGAGCTCCAGCTCTAGTTTGGACAGACACGTGCTGGTGCATAGCGGAGAACGGCCGTTCAATTGCAAATATTGCGGTGACACTTTTACTACCAACGGTAACATGCATCGGCACATGCGCACTCACTCCAGCAAGCTTGAAAACTACGAGTCAGACGGCAGCACCGACAGCGGAAGTAACCGAAGCATCGAATTCAATAACAATAAAGTGGAAACGAAGCATGCTAACAAACGCAAACTAGAAGATGAAGAAGACAACGAGCCTTCACTCAAAAAGTTTGCTCTATCAAATTCGCAGTTTCGTTGTCCGGTATGCGAGAGGGCGGACTTCACCTCCAGTGAAATCTTGGACGCACATCTCGAAGATAACCATCCAGAATACCCAAGTAAATGCGGACAATGCGatcaagtatttttaaatagcaaacaGCTGATGGTGCATAAGGAGCGTGCCCACGTGACACCAAAGCCTGCCGTGGTTGGCTTCAAAGATCTCACCCGTTGGGACTTCTCCAGTCAAAAGTTTCCTCACATCGCCAGGCGGGAATGCGAACTCAACATTCACCAAGCTGCTGCAGGTGGATTGAATTTCCAGTGTCATAAGTGCTGTAAAGCATTCCCTTGCTCTAGCTCTCTTGAAATCCATGAGCAAAGCTGTGTTAACTCCCCTGTCGGCTTAAACTTATGCAAACCTAATGGCATTTCCGAGGATGAAATCAGACGTGCAGAATTCTTCTCCAGACTGAACCTCCAGAATAATTCACCAGAAAAACTCATCCCTCCAGCTCTATACCCTTCAAAAGAAACCACTCACAAGCTTCGTGAACATTTGGCCAAAGCCATGGATGGCACCAAGGACTTAGCTGACATCCAATCGATTCTCTCTAACATCAACAGACAACAGCTCTCTAACAGCAAACAGGAGGTAAGAATACCACCTCCACCTCCTCCAACTTTAAAACCAACGTTAGAAATTGGACAGGACTCAAAAACAGAAAACGAGGAGGAAACTCAAGATTCCTTTGCCATAGAGTTCAGAAAAATGAAGCTGAGAGGTGAGTTTCCATGTCGGCTCTGCACCGCAGTATTTCCTAACTTAAGAGCTCTAAAAGGCCATAACAGAGCCCACTTAAGTGGAAACAGCAATGGAACATACTACTGTAACATGTGCCCACACTCTTCAATAGACAAAGCTGCTTTAATACGTCACATGAGGACTCACAATGGTGACCGGCCTTACGAATGCTCTCTATGTAACTACGCCTTCACCACTAAAGCAAACTGTGAAAGGCACTTGAGAAATCGCCACGCGAAAACCACCAGGGAGGATGtgaagaaatcaataatttaccATCCATCAGAAGACCCTACCAATGACGAACTGAATAAATTAACCATGAAGGATGAGAAGAAGCATTTATTCCCATCCCCTATTGAACCAAGAGATGTTAGTCCTGAAAAAGTACATTGCTCAACCCCCAAGATTCCTTTGAATACTGAAGTCAGTTTTCCACCTCCGACAATCGTTCCTGACCTCCAAGCTCTTAAGCCATCCAAGATCTTCTCCAGCATCGATTTTATCCACAACGAAAACCTCAAAGCAAACCGCTTTGTACCTCCCTTCTTTCCTCAACCATTTAACTTTGCTCCCAAGCTGCCTACAATCATCCCCACCTCTCCTCCAGAGGCACCCCCTGCAATCCCAAGTAAAATCCAAGTGAAGCCATACGAAGCCCTTAGGGAAAGCAATCACTCTTTCGAGCAATCTGATGATGAATTTTacgaagaagaagaggaagtaGCCTTGGACTTAAGCAAAAAGAAAATGGACGAAGAAAAGCAGAAAATGATTGAAGAAGACGACGAAGATGAACCTCAAGACCTAACCAAGAAAGCTCCAAGCTTAATACCCCATATGAACGAAATGGTTGCTCAACAGTTATTAAAAACCCATCCAGAAATCACTCCTACAGCAGCATTATATGCCACCCAACTTGCTAATCTTTGCAGAAATGGATTTCCTGGTTGGGGAGCCTTCCCTGTGAATCCTTTATTGTATCAAGCATTTCCTGGACTCCCTCGTAACGCTCAAGAGCTCAAAGAACGCATTCAAAGATTCCAACTGTGCGGAGGTTCAATGATTTCTGAGGACTtaaaacctcagctcctagtaGAAACTCCCATTCCAGCCAACTTCAAACCTATGATGTCAAGAGAGAATATATTTCCTCCAAAACATCTTGctgaagaacaagaagaaccaCAACCGTTAAACATTAACGTGAGTGAATCAAGTTATGACAGTTTACCACCAAAGATGCACAGCCCCGTACAGCAACCACACAAATCTGACATGACTCATTCACCTAATTCAGTTAAAATGGTGATTAAAAATGGAGTTCTTATGCCCAAACAGAAGCAGAGGAGATACAGAACTGAAAGACCTTTCACTTGTGAGCACTGCAGCGCAAAGTTCACTTTGAGATCCAATATGGAGCGGCACATCAAGCAGCAACACCCTCACTACTGGTCTCAAAGACAGAGAGGTGCCATCGGACAACCTGGAAGGAAACCTCAAGGTTTGCTGCTCAAGCCAAACTTTTGCGACTTGCCTCTCACAAACTACGAGATGCCAAAGATGCACGACTTCGATGAAACCAAAGAACACATGAACGAGAAACTGCGATTTGCGTTACTGGCGCAAGGAATGCAAAACAACCACTTCAACCATCAGGATGTAAAAAAAGACGACGATGAGGACTGCGCTTTGGTTATTGATGAAAATAGTAAGACTGAAGAACAAAATAGCAAACCAACAGAACATATTGCTATGAATCTGACTCGTGATTGTAATGACGCGGTGAGGGTGAACCAAAGAGCAACCAAAGGTGAAGAAGACTTGGTATCGGTTTCCAGACTTCTGGACAATGCTTCGCAGCAACAATTTAAAGAGTACTTTAAGGGGGACAGTGAGGATCATGAAGTCGGTGGAGTCAGTGAAGAGGAAGAGGAGGGTCTTGTGGCAAGTGGGAGTACTAGTGAAGGAAACATATCTGGAACTGATGAAAATAGATCTGACTCAGAGACAATCAACTCCCAAACACCAGTAAAAAAGAAGTCAGCCTACTCCCTAGCCCCGAACCGTGTTAGTTGTCCATTCTGTAGCCGAAAGTTTCCTTGGAGATCATCCCTACGCCGCCATATCCTCACCCACACCGGTGACAAACCATTCAAATGTTCGCACTGCCCTTTGCTCTTCACCACCAAATCGAACTGTGACAGACATTTGCTGCGGAAGCACGGTAACAGCGCCACCACGATAATCACCGGAGAAGCCCCGACTAACGCCAACATGAACTACTTGATGAGGAACGTACCTGAGAGGCCCTTCAAATGCTCGAGCTGTCCCAGCAGCACCTTTTCCACTTATTCCAAGTTGAAGACCCATATGAGCTGTAAACACTTGACCAACGCTCAAGGGGATGACATAAGGGCTCAGGGTTACGAGGCGGGCAGCTCAGAAGATGAGAAAATCTGTAAGCCGGAACCGGTGAGGAACGACTGGGAGAACCAAATCTCTTATAGCAAGTGTGCGGTCACTGGTAATGCGGCAGACCCACAACCGAATGCTCAGGTGGTAAATTCTGATCTGCCTTTCAAGTGCCACCTGTGTGAGAGCTCGTTTTCTGAGCGGCAACCTGCTTTGGAGCATATCAGAGATAGACATGCTTCTGAGTACGACTTGCTGATGTCAAAGAACGCTCTGGAGATGAACCCTACCACTCATCAAGATGAAGCTTCCGCTCATCATGACGAAGACGATTCGGATATCAGAGGCAAATTTCCTGATTATTCGAACCGGAAAGTGATTTGCGCATGGTGCATGCGCAGATTTTGGTCCGCCGAGGATTTGCGCAGACATATGCGCACACACACCGGCGAACGGCCTTTCAGTTGTGACATTTGCGAACGTAAGTTTACTTTAAAGCATAGTATGCTGAGGCATCGTAAGAAGCATGCCTTGAATAGCAACTTTGAACATAGCGATGAGGATAATATGGAGCATTCGCATCGTGCAGAGGAGTCTGGTAATAAGAGTTCTTCCGATGGAAAAGGAGAGAAAACTGACGAGTCAGATGTGCAGGAGGGAGCAAGCGATTTGATAGGTAACCTGTTGGGGATTAGAGATAAGACTATTATTGATAAGGTACTTGATGCTTCGGCAGATGATGCCGCCAAGCTCTTAGGGGTTAGGAATGGGGTTAAAGAATAA
Protein Sequence: MEEPHQPTNPTKEKINQSDSGIFSATNTTIDQSTTCESDNRSDCSSPERKYVCPICDIILTSQHKFTLHIRSHNNDQDQDQVPEKGFVCKICNKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHSSKLENYESDGSTDSGSNRSIEFNNNKVETKHANKRKLEDEEDNEPSLKKFALSNSQFRCPVCERADFTSSEILDAHLEDNHPEYPSKCGQCDQVFLNSKQLMVHKERAHVTPKPAVVGFKDLTRWDFSSQKFPHIARRECELNIHQAAAGGLNFQCHKCCKAFPCSSSLEIHEQSCVNSPVGLNLCKPNGISEDEIRRAEFFSRLNLQNNSPEKLIPPALYPSKETTHKLREHLAKAMDGTKDLADIQSILSNINRQQLSNSKQEVRIPPPPPPTLKPTLEIGQDSKTENEEETQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLSGNSNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREDVKKSIIYHPSEDPTNDELNKLTMKDEKKHLFPSPIEPRDVSPEKVHCSTPKIPLNTEVSFPPPTIVPDLQALKPSKIFSSIDFIHNENLKANRFVPPFFPQPFNFAPKLPTIIPTSPPEAPPAIPSKIQVKPYEALRESNHSFEQSDDEFYEEEEEVALDLSKKKMDEEKQKMIEEDDEDEPQDLTKKAPSLIPHMNEMVAQQLLKTHPEITPTAALYATQLANLCRNGFPGWGAFPVNPLLYQAFPGLPRNAQELKERIQRFQLCGGSMISEDLKPQLLVETPIPANFKPMMSRENIFPPKHLAEEQEEPQPLNINVSESSYDSLPPKMHSPVQQPHKSDMTHSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSAKFTLRSNMERHIKQQHPHYWSQRQRGAIGQPGRKPQGLLLKPNFCDLPLTNYEMPKMHDFDETKEHMNEKLRFALLAQGMQNNHFNHQDVKKDDDEDCALVIDENSKTEEQNSKPTEHIAMNLTRDCNDAVRVNQRATKGEEDLVSVSRLLDNASQQQFKEYFKGDSEDHEVGGVSEEEEEGLVASGSTSEGNISGTDENRSDSETINSQTPVKKKSAYSLAPNRVSCPFCSRKFPWRSSLRRHILTHTGDKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIITGEAPTNANMNYLMRNVPERPFKCSSCPSSTFSTYSKLKTHMSCKHLTNAQGDDIRAQGYEAGSSEDEKICKPEPVRNDWENQISYSKCAVTGNAADPQPNAQVVNSDLPFKCHLCESSFSERQPALEHIRDRHASEYDLLMSKNALEMNPTTHQDEASAHHDEDDSDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICERKFTLKHSMLRHRKKHALNSNFEHSDEDNMEHSHRAEESGNKSSSDGKGEKTDESDVQEGASDLIGNLLGIRDKTIIDKVLDASADDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -