Agra071672.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- Zfy2
- Assembly
- GCA_030068095.1
- Location
- CM057955.1:9277956-9282415[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 5e-05 0.013 18.1 3.0 1 23 10 33 10 33 0.95 2 28 0.5 1.3e+02 5.5 0.3 3 23 168 186 167 186 0.90 3 28 0.00033 0.086 15.5 0.8 1 23 190 212 190 212 0.97 4 28 0.02 5.2 9.9 2.4 1 23 218 240 218 240 0.98 5 28 1.1 3e+02 4.4 0.2 1 23 244 268 244 268 0.84 6 28 3 7.9e+02 3.0 1.1 2 23 275 296 274 296 0.86 7 28 0.00053 0.14 14.9 2.9 1 23 302 325 302 325 0.92 8 28 0.00012 0.032 16.9 1.5 1 20 336 355 336 356 0.96 9 28 1.7e-06 0.00046 22.7 0.7 2 23 368 389 367 389 0.98 10 28 1.8e-06 0.00048 22.6 1.6 1 23 395 417 395 417 0.98 11 28 0.0073 1.9 11.3 0.2 1 23 506 528 506 528 0.98 12 28 2.4 6.2e+02 3.4 0.2 1 14 532 545 532 547 0.87 13 28 0.24 62 6.5 1.3 2 23 563 584 562 584 0.96 14 28 0.00022 0.057 16.1 3.5 1 23 590 613 590 613 0.96 15 28 3.9e-05 0.01 18.4 0.7 1 23 624 647 624 647 0.94 16 28 4.1e-06 0.0011 21.5 1.0 2 23 656 677 655 677 0.97 17 28 5.7e-05 0.015 17.9 0.5 1 23 683 705 683 705 0.97 18 28 0.022 5.7 9.8 2.7 2 23 792 813 791 813 0.96 19 28 0.35 91 6.0 0.5 1 23 839 861 839 861 0.98 20 28 1.7 4.5e+02 3.8 0.1 1 23 865 887 865 887 0.96 21 28 0.037 9.6 9.1 0.5 1 23 893 916 893 916 0.97 22 28 0.0019 0.49 13.1 3.1 1 19 922 940 922 944 0.90 23 28 0.017 4.5 10.1 0.9 3 23 952 973 950 973 0.96 24 28 0.00023 0.061 16.0 0.3 2 23 985 1007 984 1007 0.91 25 28 1.3e-05 0.0034 19.9 1.2 3 23 1021 1041 1019 1041 0.96 26 28 7.9e-05 0.021 17.5 0.8 1 23 1047 1069 1047 1069 0.98 27 28 2.2e-05 0.0057 19.2 0.3 1 23 1075 1097 1075 1097 0.99 28 28 0.0029 0.77 12.5 0.0 1 21 1103 1123 1103 1124 0.96
Sequence Information
- Coding Sequence
- ATGGAACTTCACGAGAATAGCAAGGAGTACCAGTGTACTTTATGTGATAAGAAGTTTAACACGAAAAGGTACCTACAGAGTCACGAGATGTATAATCACAAGAAGGAGGTCTTTAACATCGAGGAGGTGTTCCAGTCCGAGAACTACTTCAGAACCATCAGCTTCAACCGTTCTTTGGTGCGCCATCTGAACCCAATCCATAAAGTTGatattaaatatgAGGACGTCAAACCAGCCAAGAACCTCAAAAAGGGTACGAAAAACCCCAAGAGGCGCCCTCCTAAGCGCATTATTAAGGTTGAGGATTGGACTTCCAGCGACGAGGAAGCGCGTCAAAAAACCGCCATAAGAAAAATCAGGAAACCCAGATCGGCATTGGAAAAACTCTACAAGGAGCTCTGGGAAAAGCCTCCGACCTGGTCCGATGACTCAGACCATGAATCCGATTGGTTCAGTGACCCAGCGAGTTCCTCAAAAAAGAAACAGGACATGTCTGGATTATGTCCGCAATGCGGCAAGGTGGTGGCCAACATGAAAATCCACATGAAGAAGTACCACCTGAACAATTACTCTTGCGACCTCTGCTCGATCACCTTCAGGAACGAGAAGCAGCTGAAGGAGCACAAGGAGGTGCACGACTCCGAGAACCCCCACAAGTGCGACTTGtgcaatttaatatttaaaaacgtcACCAAACTCGCTCTGCACCGATTTACGCACACGGGCAACTACGACTGCCCTATCTGCGGGTTCAACGCCACCAGCAGGTTCAGAAACTCCATCATAGCGCACATCAAACGTCACGAGGACAATTATGCGGTCAGATGCGACATATGCAACCGCGGATTCCTCTGCAAAAAGAAACTGGAGGAGCACATCGAGTGGCACGAGAACGTGCCCAAGTACGAGTGCGAGATCTGCCATAAGAAATTCCCCGTCAAGTCGTACCTCACCCTTCACAACAAGTTCAATCACAAGAAGGAGCTTTACGGCACCGAGGAGATTTTCCAGTGCGAAATCTGCGGCAGAAAGTTCACCTTCGAGAAGAGCTTTAAGCGACATCTGAGCTGCATCCATAAGATCGGCAAAGATTTTACCGTGAAGTGCCCGGTGTGCGACAAGGTGATCGCTAATAATCACAACTTGAAGAAACACATGAAGGTGCACACGGGGGAGAAGAACTTCAGCTGCGACGTTTGCGGAAAGACGTTCTCGCAGAGGCAGTACGTCACTAGGCACCAGAAGGTTCACCAACCTGATCGGGAGAATAAGAAACGACCATTGGTTAGTGAGGAGTACCCCATAAACCTCTCAAACGCTCCACCGACTTTAACCCTCAATCCCGACCCTCAAACACTCCAAAAAAACCGAGATTTATGCAACATATGTAATGTCTTGGTAGGAAACCTCAAAGACCACTCCAAGACCCACCAGTTGACTTGCGACTTCTACAGCTTCGGCACCTCCAACTACCTTGGAGAGCACATCCCCGAAGATCTCACCCCTGAGGGACCTTATAGTTGCGACATCTGCAACGCCCCTTACCAAACCCTCCTGAAACTAACTGTGCACCGACGcattcacttaaaaaaatacgtttgtCCCCTCTGCGGGTTCGAATCCTCCACAAGATCCTTCGCTCCCATCAAGCAGCACATCGACCGACACGAGGAGAGATTCAAAGTGAGATGCGACCTGTGCAAAAAGGGTTTCATGTGCAAGGCGAAGCTCCAGGACCACTTGGAGGTGCACGCCTCAGAACCGAAGTACCAGTGCGAGTACTGCCGCAAGAAGTTCACGGTGAAGAACTACCTGAAGTTGCACGTGCGTTTCAATCACAAAAAGACCCTCTCGGGGATCCCGGAGGTGTTTCAGTGCGAGATATGCGGACGAGAATTCTCGTTCGAGAAGAGTTTTAGGCGCCACTTGAGTGCGATCCATAAAATCGGAAAGGATCTCACCGTGGAGTGTCCCGTGTGCCACAAGACGATCGCcaacaatttcaatttaaagaagCACATGAGGATCCACACTGGGGAAAAGAATTATGCGTGCGCTATCTGTGGAAAGAGGTTTTCGGATATGAAATATGTGAGGAAACATCAGAGTGTCCATCTGAAAGAGGGCGGAGGCTTGAAGTCCAGGAGAGGGAGAGGAGGGAAGTCGATACTGGAGAGGATCCTGATAAAACAGGAACTCCTGGAAGACATTCAACAGCACAAAAAAGTGCGGAGGAAACGAAAACCCGCTGGTTATACATCGAACGAGGAGCATCCGGATGAGGACAAACCAAAAGTGCGTAAACCccgaataaaaaaagaaaaatcggaCAGTCCTCCGAAGCACCCGAGAAATCAGAAGGCGAACATGTGGACTTGCAAGTTTTGCTTCGAAACCTTCGCCTCCAGAAAGGAGATGTTTCAGCATAGAAAGCAACATCCGGAGGAGGAGAAGAAGACTGTCACCGCGGAACCTTCCACCACAAAGTTCTCTTACGACGAGGAACTCGACATATTCACTTGTAACAATTGTTCTGCAGAATGCCAGGACCTAGAAGAGATCGAGAAGCACGTGGAAACCCACGAGAAAAAGTTCGCGTGCTACGTCTGCAAAGAAGAACTGTTCGGCCCCATTAACTACACCGTCCACGTCCAAAAGCACCGGGACGACAAGCTGTTCCCGTGCCCCTGGTGCCAGTACATGTCCCATAAAAAAGAAGCCATGCAAGTGCACATAAACCGACTCCACTTGCAAATCTACGATTTCCAGTGCACCAAGTGCGGAAAATGTTTCAACGACGCACTGAGCTTCAAGGAGCACGACAACGTGCACCTGAACGTTAAGCCTTTCGGTTGTGTGGTGTGCAGCAAGAACTTCTACTACTCCAGGTATCTGCTCTCGCACCAGCTGAGGACTCACACGGTGCGAGTGCTGGATCCAGAGTCCAAGACCCAGTGCAGCGTGTGCCAGAAGATCTTCGCACGGCTGGACACCTTGGAGAGGCATTACGCCGCCAAGCATCTCACCGTACGCACCGGTCCCTATGAAAAAAAGCATCTGTGCGACGTCTGTGGACAAGGCTTCTCCAGACCGGATAAACTTAAGATTCATTACAGGAAACACACCGGGGAGAAGCCTTATTCTTGCGTGTACTGCTCCAAAAGCTTTATTAAGCGCGACTACTTGATAATGCACGAGAGGATCCACTCCGGAGAGAAACCGTACGAGTGCGCCATCTGCGGGAAATGCTTTAACCAGGGGGCACCTTTGAGGATCCATTTGAGGAGCCACACCGGTGAACGGCCTTACGTGTGTCCCTATTGTGGTGCCGGTTCTGTATCCAGAGGTGCTTTGAACAGTCACATTAAGAGCTGTATTGGGGCGGTGGTTGGGGCAGCCCAGGATATTGGACACGAGGAAGTTGTGAGGATGTAA
- Protein Sequence
- MELHENSKEYQCTLCDKKFNTKRYLQSHEMYNHKKEVFNIEEVFQSENYFRTISFNRSLVRHLNPIHKVDIKYEDVKPAKNLKKGTKNPKRRPPKRIIKVEDWTSSDEEARQKTAIRKIRKPRSALEKLYKELWEKPPTWSDDSDHESDWFSDPASSSKKKQDMSGLCPQCGKVVANMKIHMKKYHLNNYSCDLCSITFRNEKQLKEHKEVHDSENPHKCDLCNLIFKNVTKLALHRFTHTGNYDCPICGFNATSRFRNSIIAHIKRHEDNYAVRCDICNRGFLCKKKLEEHIEWHENVPKYECEICHKKFPVKSYLTLHNKFNHKKELYGTEEIFQCEICGRKFTFEKSFKRHLSCIHKIGKDFTVKCPVCDKVIANNHNLKKHMKVHTGEKNFSCDVCGKTFSQRQYVTRHQKVHQPDRENKKRPLVSEEYPINLSNAPPTLTLNPDPQTLQKNRDLCNICNVLVGNLKDHSKTHQLTCDFYSFGTSNYLGEHIPEDLTPEGPYSCDICNAPYQTLLKLTVHRRIHLKKYVCPLCGFESSTRSFAPIKQHIDRHEERFKVRCDLCKKGFMCKAKLQDHLEVHASEPKYQCEYCRKKFTVKNYLKLHVRFNHKKTLSGIPEVFQCEICGREFSFEKSFRRHLSAIHKIGKDLTVECPVCHKTIANNFNLKKHMRIHTGEKNYACAICGKRFSDMKYVRKHQSVHLKEGGGLKSRRGRGGKSILERILIKQELLEDIQQHKKVRRKRKPAGYTSNEEHPDEDKPKVRKPRIKKEKSDSPPKHPRNQKANMWTCKFCFETFASRKEMFQHRKQHPEEEKKTVTAEPSTTKFSYDEELDIFTCNNCSAECQDLEEIEKHVETHEKKFACYVCKEELFGPINYTVHVQKHRDDKLFPCPWCQYMSHKKEAMQVHINRLHLQIYDFQCTKCGKCFNDALSFKEHDNVHLNVKPFGCVVCSKNFYYSRYLLSHQLRTHTVRVLDPESKTQCSVCQKIFARLDTLERHYAAKHLTVRTGPYEKKHLCDVCGQGFSRPDKLKIHYRKHTGEKPYSCVYCSKSFIKRDYLIMHERIHSGEKPYECAICGKCFNQGAPLRIHLRSHTGERPYVCPYCGAGSVSRGALNSHIKSCIGAVVGAAQDIGHEEVVRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -