Basic Information

Insect: Anthonomus grandis
Gene Symbol: -
Assembly: GCA_030068095.1
Location: CM057955.1:9265272-9271163[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 9.7e-05 0.025 17.2 0.2 1 21 10 30 10 31 0.95

2 30 0.56 1.5e+02 5.4 0.0 1 19 81 99 81 100 0.84

3 30 0.013 3.3 10.5 0.2 1 23 131 154 131 154 0.97

4 30 1.5 3.9e+02 4.0 1.0 1 23 157 179 157 179 0.88

5 30 0.032 8.5 9.2 0.4 2 23 186 208 185 208 0.96

6 30 0.0048 1.3 11.9 3.9 1 23 223 246 223 246 0.96

7 30 1.7e-05 0.0045 19.5 0.9 3 23 276 297 274 297 0.96

8 30 7e-07 0.00018 23.9 0.7 1 23 303 325 303 325 0.98

9 30 1.9e-05 0.0051 19.4 2.0 1 23 331 353 331 353 0.98

10 30 0.27 71 6.3 1.0 1 20 359 378 359 380 0.81

11 30 0.015 3.8 10.3 0.3 2 19 489 506 489 507 0.96

12 30 0.00097 0.26 14.0 2.9 1 23 535 557 535 557 0.96

13 30 1.3 3.3e+02 4.2 0.0 1 23 579 601 579 601 0.97

14 30 0.017 4.5 10.1 0.2 3 23 636 657 634 657 0.96

15 30 0.00039 0.1 15.3 4.3 1 23 663 685 663 685 0.97

16 30 0.038 9.9 9.0 1.0 1 23 691 714 691 714 0.93

17 30 0.062 16 8.3 0.2 2 21 726 745 726 746 0.93

18 30 9.2e-05 0.024 17.3 0.4 1 23 763 785 763 785 0.95

19 30 3.2e-06 0.00084 21.8 0.6 1 23 791 813 791 813 0.98

20 30 7.6e-05 0.02 17.5 2.5 1 23 819 841 819 841 0.99

21 30 0.00065 0.17 14.6 0.8 1 21 847 867 847 868 0.95

22 30 0.0047 1.2 11.9 3.3 2 23 918 939 917 939 0.96

23 30 3.8 1e+03 2.7 0.1 1 23 960 982 960 982 0.96

24 30 0.0027 0.72 12.6 0.8 1 23 986 1008 986 1008 0.98

25 30 0.0014 0.36 13.6 2.0 1 23 1045 1067 1045 1067 0.96

26 30 0.14 37 7.2 1.4 1 23 1073 1096 1073 1096 0.94

27 30 1.8e-05 0.0047 19.5 0.5 1 23 1122 1144 1122 1144 0.95

28 30 2.9e-06 0.00077 22.0 0.8 1 23 1150 1172 1150 1172 0.98

29 30 1.5e-05 0.004 19.7 3.0 1 23 1178 1200 1178 1200 0.99

30 30 0.002 0.53 13.0 1.0 1 21 1206 1226 1206 1227 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	9.7e-05	0.025	17.2	0.2	1	21	10	30	10	31	0.95
2	30	0.56	1.5e+02	5.4	0.0	1	19	81	99	81	100	0.84
3	30	0.013	3.3	10.5	0.2	1	23	131	154	131	154	0.97
4	30	1.5	3.9e+02	4.0	1.0	1	23	157	179	157	179	0.88
5	30	0.032	8.5	9.2	0.4	2	23	186	208	185	208	0.96
6	30	0.0048	1.3	11.9	3.9	1	23	223	246	223	246	0.96
7	30	1.7e-05	0.0045	19.5	0.9	3	23	276	297	274	297	0.96
8	30	7e-07	0.00018	23.9	0.7	1	23	303	325	303	325	0.98
9	30	1.9e-05	0.0051	19.4	2.0	1	23	331	353	331	353	0.98
10	30	0.27	71	6.3	1.0	1	20	359	378	359	380	0.81
11	30	0.015	3.8	10.3	0.3	2	19	489	506	489	507	0.96
12	30	0.00097	0.26	14.0	2.9	1	23	535	557	535	557	0.96
13	30	1.3	3.3e+02	4.2	0.0	1	23	579	601	579	601	0.97
14	30	0.017	4.5	10.1	0.2	3	23	636	657	634	657	0.96
15	30	0.00039	0.1	15.3	4.3	1	23	663	685	663	685	0.97
16	30	0.038	9.9	9.0	1.0	1	23	691	714	691	714	0.93
17	30	0.062	16	8.3	0.2	2	21	726	745	726	746	0.93
18	30	9.2e-05	0.024	17.3	0.4	1	23	763	785	763	785	0.95
19	30	3.2e-06	0.00084	21.8	0.6	1	23	791	813	791	813	0.98
20	30	7.6e-05	0.02	17.5	2.5	1	23	819	841	819	841	0.99
21	30	0.00065	0.17	14.6	0.8	1	21	847	867	847	868	0.95
22	30	0.0047	1.2	11.9	3.3	2	23	918	939	917	939	0.96
23	30	3.8	1e+03	2.7	0.1	1	23	960	982	960	982	0.96
24	30	0.0027	0.72	12.6	0.8	1	23	986	1008	986	1008	0.98
25	30	0.0014	0.36	13.6	2.0	1	23	1045	1067	1045	1067	0.96
26	30	0.14	37	7.2	1.4	1	23	1073	1096	1073	1096	0.94
27	30	1.8e-05	0.0047	19.5	0.5	1	23	1122	1144	1122	1144	0.95
28	30	2.9e-06	0.00077	22.0	0.8	1	23	1150	1172	1150	1172	0.98
29	30	1.5e-05	0.004	19.7	3.0	1	23	1178	1200	1178	1200	0.99
30	30	0.002	0.53	13.0	1.0	1	21	1206	1226	1206	1227	0.95

Sequence Information

Coding Sequence: ATGTCCAGCGGCATAATCGGGATAACGTTTCAATGTTCGGACTGCGGAAACACGTTTAAGAGCCTGCAAGCGCTCACGGAACACATGGAGTCCCAATGCGTAACTATTGCACAAAACAATGAGGTGGAGGAACTCTTAAGCAAACTGCCGGGCATAAGGGTgataaaaaaagcagaaaagaagcaaaaaacCACCCCCAAAAAGTCGAAAATAGAGAACAACGAGTCCGTGAGGTGTTTCTTCGTGTGCCCCACTTGTCCGGAAATATTCGCCTCCGAAGAAATCCTGGATAAGCACCAACCGACTTGCGGAACCCCAAAAGAATCTCTCAGCAAGAAGAAGCAGAAGAGCTCCTTTGAACCGTACACCTTTGACCGACTGGCACACACGTACAGCTGCAACAAATGCCCGGTGGAGTTCGAATTCAAGTCATTGATAGAGGATCACGTCAAGTCCGCTCACGCGTACTTCCACTGTGACGTTTGCGACATCGAATTCGACTCCCCCTTGAAGTTCGGGTACCACAGCCTCAAACATGCCCCGGACATGTTGATGAGTTGTCCCTGGTGCTCCTTCAGGACCCCCCTTAAGACCGAACTGAAAAATCATCTGCAAACCGAGCATCCCGACGAAGAAATAAACCTGCCGCACGTCGAGGACTCGGACTATCCCTGCGTGGTTTGCGGCAAGCAGTTCTTCGACTGTCGCAAACTGTTGCACCACCAAAAGAACGTCCATAAAGCCAACGTGATTTGCGTGCCTCTCCTTGGAGCCAAATTGCCGGAGAGCACAGAGGTCGCCCCGAAAGAACCGTGCTCGTTATTGTGCGACACCTGCGGCAAGAATTTTAGCTCCAAGTACCGCCTGGAGCGCCACCAGAGGGCGATGCACGAGGGACTAAAGCCCTTCGTGTGCAATTACTGCGGCAGAGCCTTCACCGGCAAAGATACCCTGAAGAAGCACGAGAGAATTCACACGGGGGAGAAACCGTACCATTGCGAGTACTGCGGCAAGAACTTTAGGCAACCGGGACCGTTTAGCGTTCACAGACGTACCCACACCGGCGAGAGGCCGTACCAGTGCAAGTTCTGCAACCGGGGATTCATTACCAATCAAATCAAGAAGATGCACATGAAGAACTGCACCATTAGGGCCGGGAAGTTCGCTCCCGATAGTACCACCGTCGAGTTTTATCAGGAGGTGCGAGAGAGCCCTCCGCTCGCCCTAGCTCCCACCCCTTTCCTCCCCCTCCTTATTGAATTTTCTTTGAGGGCTCACAGTAATGCCACCCCAATTTTTAGGATAAAAATCGAACCTCCCGATACGCCTCCACGTCGAAAAACCAGATCGaccaacaaaaacaaatatttcaaatcgGAAGAGAGCGACGACGAGCTCCCCCTGCTAAGCAGACTTAAAAACCTCGCggaaaaacctcaaaaaaaacTCAAAGGTAAGCAGCGGAGGTGTCCCCGCTGCCAAGAAACCTTCGACACCTCCGCGGAATGGCAGAGGCATAAATGGAGCGAGGACTGTAGCTTCCGACCTCCTCAGTCTCCTCCTCCCGCCGTCAAGCGGAGGAAGCCTCACTCGAATCGTATCCACGCTTGCAAGTACTGCCAGGagatttttaaaacgttaaaattactGAAGGAGCACAAGAAGGTGCATAAGCCCGAGGAGATGTGCGAGGAGGAGGAGCCTTTTTATAAACTCGACCATATCCAGGACCTCTATATTTGCTCCGTTTGTTCCGCGGAGTATCAAGAGGAAGACGAGGCCAAGGAACATATTCTCACCCATAGACAGATAATCAAATGTATCGCGTGCAATATGGAGTTTAAAGAGTACTTTGACTTGGGGGTTCATAACAAGCAGACGCACGATCAGGAGGGCAAGTTTGGGTGCCCACTATGCACCTACGCGTCCTCGAACTTGTACAGTTTTAAGGCGCATATTAATTATGTGCATCTCAAGAGGTTTCCGTTTTATTGCAAGGAGTGTGGGAAGGGATTTAAGCACTATAAGACTTATATGGAGCATCAGAACTTGCATATTGGGAAAAAGCCTTACGTATGCATTGTATGCGAGAAGGCTTTTACTTACGAGAAGTACTTGCATGTGCACCAAGTGAGAAATCATCAGGTGGGCATAACGGGCAGAAAAATCGAAAACGAATGTCGCACCTGCAACAGGCACTTCTATAAAGCACAAGCCCTGGAGGAGCACATAGAAATCTGCTATAAACGGCAAAAGAAACCTAAAAGCGCCATCCCGGTGAAGGCTTTTCTCTGTGACACTTGCGGGCAAACTTTCACAGAGAAAGCGAAATTGCTGGAGCATCTGCGTGTCCACAGGGGCGACCTGCCTTTCGTGTGCACCTGGTGCGGGAAGAAATTCCCTGTTAAGTCTTACCTTAAAACTCACGAGAGGGTGCATACGGGGGAGAAGCCTTACTCTTGTGAGTTTTGCGGTAAACGCTTCGCTCAGCACGCTCCCTTCAGGGTTCACCGCAGGACTCACACGGGAGAGAGACCGTATGTGTGTGAGTTTTGTAACAAAGGCTTCACCACCAATCAGGGGTTGAAGTTGCATAAAAAAAACTGCTCGGGGGGGTTGAAAAAGGCTAAAATAGAACAGCTGCCCCAGCAGCAGTACGTTCAACTGAATCCCGCCTATATTATGGACGATCATGGCATTTTTGGTCGCTTCACGAAACACACCTTAACCCCTTGCACCAAGACCACCTGGACCTGCAAGTATTGTCAAGAGAAGTTTGAGGACCGACACCTCCTTCGCCTTCACAAAACCTCCCATAAAGCAACTTATTTTGAGGAGGAACGTCCCTCTTATAAGTACGACGAGGTGCAAAGCATTTACTTCTGTGAAACCTGCTCCGCTGAATACCAAAAGGTCGAGGAGGTCGAAGAGCACTTGAAGATCCACCAGAGGCTCTTCAAGTGCTCGGATTGCTCTCAAGAGTTCGAGAGTCCATTCGAGTTTGGGATGCATCAGATGAAACATAGCGAGGATAAAACTCTGAAGTGTCCCTGTTGCCCGTACATCAGTAAAACCTTGAACCCCAACAGCTTCAAAGCTCACGTGAATTATCAACATCTGAAGCGATTTCCGTTCTTCTGTAAGGAGTGCGGCAAGGGGTTCAAGCAGTTCAAGGTCTACCAAGAGCACCAGAACCTGCATCAGGGCACCAAGCCATACTCCTGCATCGTCTGCAGCAAAACCTTCACTTTTGAGAAGTACATGGTGGTGCATCAGCTAAAGAAACACCAGGCCTCAGTTAGTGTCAAAGACTACGACATGCCTCAAATAATTAGCCACAGAATCAAAAAGCAACCGAACTCTTTCCTCTGTGACACTTGCGGTCAAGGGTTCACCGAAAAATCCAAACTCCTCAAGCATATCAGGGTCCACAAGGGCGATCTACCCTTCGTATGTCAATGGTGCGACAAGAGGTTCCCACAGAAAGACTATCTGAAGACCCACGAGAGGGTCCACACGAGAGAGAAGCCTTATTCGTGCGAATTCTGTGGGAAATGCTTTGGGTTTTCAGCCTCCTTTAAGGTCCACATCAGAACCCACACTGGGGAACGACCTTACGTCTGTAGCTTTTGCAGCAAAGGCTTTACCACCAACCAAGGCTTGAAGCTGCATAAGAAGAATTGTCCGGGGATTTCAATGTTGAAAATTGAGAAAACCCTTTGA
Protein Sequence: MSSGIIGITFQCSDCGNTFKSLQALTEHMESQCVTIAQNNEVEELLSKLPGIRVIKKAEKKQKTTPKKSKIENNESVRCFFVCPTCPEIFASEEILDKHQPTCGTPKESLSKKKQKSSFEPYTFDRLAHTYSCNKCPVEFEFKSLIEDHVKSAHAYFHCDVCDIEFDSPLKFGYHSLKHAPDMLMSCPWCSFRTPLKTELKNHLQTEHPDEEINLPHVEDSDYPCVVCGKQFFDCRKLLHHQKNVHKANVICVPLLGAKLPESTEVAPKEPCSLLCDTCGKNFSSKYRLERHQRAMHEGLKPFVCNYCGRAFTGKDTLKKHERIHTGEKPYHCEYCGKNFRQPGPFSVHRRTHTGERPYQCKFCNRGFITNQIKKMHMKNCTIRAGKFAPDSTTVEFYQEVRESPPLALAPTPFLPLLIEFSLRAHSNATPIFRIKIEPPDTPPRRKTRSTNKNKYFKSEESDDELPLLSRLKNLAEKPQKKLKGKQRRCPRCQETFDTSAEWQRHKWSEDCSFRPPQSPPPAVKRRKPHSNRIHACKYCQEIFKTLKLLKEHKKVHKPEEMCEEEEPFYKLDHIQDLYICSVCSAEYQEEDEAKEHILTHRQIIKCIACNMEFKEYFDLGVHNKQTHDQEGKFGCPLCTYASSNLYSFKAHINYVHLKRFPFYCKECGKGFKHYKTYMEHQNLHIGKKPYVCIVCEKAFTYEKYLHVHQVRNHQVGITGRKIENECRTCNRHFYKAQALEEHIEICYKRQKKPKSAIPVKAFLCDTCGQTFTEKAKLLEHLRVHRGDLPFVCTWCGKKFPVKSYLKTHERVHTGEKPYSCEFCGKRFAQHAPFRVHRRTHTGERPYVCEFCNKGFTTNQGLKLHKKNCSGGLKKAKIEQLPQQQYVQLNPAYIMDDHGIFGRFTKHTLTPCTKTTWTCKYCQEKFEDRHLLRLHKTSHKATYFEEERPSYKYDEVQSIYFCETCSAEYQKVEEVEEHLKIHQRLFKCSDCSQEFESPFEFGMHQMKHSEDKTLKCPCCPYISKTLNPNSFKAHVNYQHLKRFPFFCKECGKGFKQFKVYQEHQNLHQGTKPYSCIVCSKTFTFEKYMVVHQLKKHQASVSVKDYDMPQIISHRIKKQPNSFLCDTCGQGFTEKSKLLKHIRVHKGDLPFVCQWCDKRFPQKDYLKTHERVHTREKPYSCEFCGKCFGFSASFKVHIRTHTGERPYVCSFCSKGFTTNQGLKLHKKNCPGISMLKIEKTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -