Basic Information

Insect: Anthonomus grandis
Gene Symbol: -
Assembly: GCA_030068095.1
Location: CM057955.1:9319888-9324922[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0016 0.42 13.3 4.6 1 23 9 31 9 31 0.97

2 27 0.00069 0.18 14.5 5.7 1 23 39 61 39 61 0.98

3 27 0.02 5.2 9.9 7.2 1 23 68 91 68 91 0.95

4 27 0.0001 0.026 17.1 1.8 2 23 98 120 97 120 0.96

5 27 9.8e-05 0.026 17.2 0.9 1 23 172 195 172 195 0.97

6 27 1.3e-05 0.0034 19.9 1.2 1 23 225 247 225 247 0.98

7 27 5.1e-06 0.0013 21.2 2.1 1 23 253 276 253 276 0.98

8 27 1.5e-05 0.004 19.7 2.7 2 23 286 307 285 307 0.97

9 27 0.0014 0.36 13.6 3.0 1 23 313 335 313 335 0.95

10 27 0.0004 0.1 15.3 4.1 1 23 341 363 341 363 0.97

11 27 0.00086 0.23 14.2 1.4 2 23 370 392 370 392 0.94

12 27 5.8e-05 0.015 17.9 1.2 3 23 399 419 398 419 0.98

13 27 4.5e-05 0.012 18.2 1.8 1 23 428 451 428 451 0.95

14 27 0.0016 0.41 13.4 0.1 1 23 458 480 458 480 0.98

15 27 0.0001 0.027 17.1 1.4 2 23 487 508 486 508 0.98

16 27 2.3e-06 0.00059 22.3 1.2 1 23 514 536 514 536 0.97

17 27 3.5e-05 0.0092 18.6 0.4 1 23 542 565 542 565 0.96

18 27 0.11 28 7.6 5.6 2 20 580 598 579 601 0.95

19 27 2.9e-06 0.00075 22.0 0.2 1 23 607 630 607 630 0.96

20 27 9.7e-05 0.026 17.2 5.6 1 23 636 658 636 658 0.98

21 27 0.00063 0.17 14.6 0.4 2 23 665 687 665 687 0.91

22 27 0.00045 0.12 15.1 0.4 2 23 695 716 694 716 0.96

23 27 0.00063 0.16 14.6 4.6 1 23 725 748 725 748 0.94

24 27 0.0056 1.5 11.6 0.1 1 23 755 777 755 777 0.96

25 27 1.7e-05 0.0045 19.6 1.8 2 23 784 805 783 805 0.97

26 27 1.4e-06 0.00038 22.9 0.9 1 23 811 833 811 833 0.98

27 27 9.4e-05 0.025 17.2 4.0 1 23 839 862 839 863 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0016	0.42	13.3	4.6	1	23	9	31	9	31	0.97
2	27	0.00069	0.18	14.5	5.7	1	23	39	61	39	61	0.98
3	27	0.02	5.2	9.9	7.2	1	23	68	91	68	91	0.95
4	27	0.0001	0.026	17.1	1.8	2	23	98	120	97	120	0.96
5	27	9.8e-05	0.026	17.2	0.9	1	23	172	195	172	195	0.97
6	27	1.3e-05	0.0034	19.9	1.2	1	23	225	247	225	247	0.98
7	27	5.1e-06	0.0013	21.2	2.1	1	23	253	276	253	276	0.98
8	27	1.5e-05	0.004	19.7	2.7	2	23	286	307	285	307	0.97
9	27	0.0014	0.36	13.6	3.0	1	23	313	335	313	335	0.95
10	27	0.0004	0.1	15.3	4.1	1	23	341	363	341	363	0.97
11	27	0.00086	0.23	14.2	1.4	2	23	370	392	370	392	0.94
12	27	5.8e-05	0.015	17.9	1.2	3	23	399	419	398	419	0.98
13	27	4.5e-05	0.012	18.2	1.8	1	23	428	451	428	451	0.95
14	27	0.0016	0.41	13.4	0.1	1	23	458	480	458	480	0.98
15	27	0.0001	0.027	17.1	1.4	2	23	487	508	486	508	0.98
16	27	2.3e-06	0.00059	22.3	1.2	1	23	514	536	514	536	0.97
17	27	3.5e-05	0.0092	18.6	0.4	1	23	542	565	542	565	0.96
18	27	0.11	28	7.6	5.6	2	20	580	598	579	601	0.95
19	27	2.9e-06	0.00075	22.0	0.2	1	23	607	630	607	630	0.96
20	27	9.7e-05	0.026	17.2	5.6	1	23	636	658	636	658	0.98
21	27	0.00063	0.17	14.6	0.4	2	23	665	687	665	687	0.91
22	27	0.00045	0.12	15.1	0.4	2	23	695	716	694	716	0.96
23	27	0.00063	0.16	14.6	4.6	1	23	725	748	725	748	0.94
24	27	0.0056	1.5	11.6	0.1	1	23	755	777	755	777	0.96
25	27	1.7e-05	0.0045	19.6	1.8	2	23	784	805	783	805	0.97
26	27	1.4e-06	0.00038	22.9	0.9	1	23	811	833	811	833	0.98
27	27	9.4e-05	0.025	17.2	4.0	1	23	839	862	839	863	0.96

Sequence Information

Coding Sequence: ATGTTGAGCAAATATTTGAGGCCCTTCAAATGCCTCGAATGCACCAAATCCTTCTTCCTCAGGAGCAGATTGAAGAGGCACATGTTCTACCACGAGCAAAACAGACTGCGCCCCTTCAAATGCTCCCAATGCTCCAAAAGGTTTATGACACAGAGATGCTTAAGGTCACATCTGCAGGTGCACGCGAGCACTGAGCCTTCGTTCTGTTGTAACCTCTGCGACAGGAGGTTCAGCAGGAAGAACAGCTTAAAATGCCACCAGGAGAGGGTCCACTTTTTGCAGGACCGCATTTACTGTGAAATTTGCGGGAAACGGTTTGCCCTGAAGCATGACTTTCAACAGCATTACAAAAGCATGCACGAGAAGCAGGATAAAGTCGTTTGTTCTGCTTGTGGAAAGTTTTACACGCCAAGTGAGGTTATCAAGTATCCGTTAGTGAGTAAAAATCAAGCCGGTGAAATTTCAGAGTTTCTCCCAAGACATATGCAACTGATGCACGGGGAAACTGGAGAGTTCCCGTGCAAAAGGTGCGATCAAGTATGCAAAACTGAAGGGGCCCTCGAGAGGCACGTGAAGACCGAGCACAGAAACACGTTGAAAGTCTGTGAGATCTGTGGTAAACACGTAAGGTGCTTGAAGTTGCACCTCAAAATCCACGCAGgcataaaagaccACAAATGCAGTAAATGCGATAAGGCGTTCGTGAGAGTCGGAGCTCTACGGTTACACGAGAGGACTCACACCGGTGAGAAGCCTTACGAGTGTCCTCACTGCCGTCAAAAATTCACTCAGTCCGGCTCACTAAGGATTCACGTGAGGAAACTGCATGCGAACCGAGAgccTCCCACTCAAAAGTCATGCAGTTTATGTTCAAAAACCTTCAAAAACAAACGTCAGCTGGTAAAGCACATGGTGACCCACCAAACCGAGCGTCCTTACACATGCTCCCTCTGTCCGAAGACTTTCAAACGCAAATACGACATCACCTGCCACATGGTGGTGCACGGTAAACACCGCGTCTACAATTGCGAGTTTTGCCCGAAAACCTTCAAGACCAAACAGGCTTTCATGGTGCACCACAGCCGTCACCTCAAAGAGTACATCGCGACCTGCGTGGAGTGCGACCGTGGGTTCGTCACCAAGCACGAGTACCTCAAGCACATGGATTACAGGCACGGCACGAACACGAACATTTGTGAGATCTGCGGCAGGGCGTGCTACAACAAAAACAGCCTCATAAATCACCTGAAGACTCACGACCAGGGTCACCACCAGAAGAAGTACAAGTGCGAGTACTGCAAGAAGAAATTTAATCAGCAAAGGGGATTGGCGCAGCATTACGTGCGGATCCACAAGGACGGAGGGCAGAAGTACGTCTGCGACGTCTGCGGCAAAGAGATCCACTCGAAACCGAGTCTCGTGGGGCACATGAACATGCACCGGGGGGCGAAGCCCAACAAGTGTCCCTATTGCGAGAAGACTTTCGTGCTGAAGACCACGATGAAGCAGCATTTGTTAACGCATACGGGAGAACGACCGCACAGTTGCACGCTGTGCGGCAAAACGTTTACCCAGAGGGGCCCGCTGAAGGCCCACATCCAGAGCCACTTGGGCGAGAAGCCTTTCGCTTGTGATATTTGCCAGGCCAAGTTCGTTACGAAGGCCCAATTGAATTATCATATGAAGGTTAAGCATGGACAGGGCTACAAGCAAAACAATTACAAAGACGTGCCGATCCAGTGCCCGTTTTGCCAAAAAGTCTGCAAAAACGACAAGTTCCTAAAGAAGCACATGGTGTGCCACCAGGACTCCCGTCCTTATCCTTGTCCCGTATGTGGCAGGGCGTTCAAACGCTCCCACGAAGTTAAGAACCATATCGCCTCGATCCACGAGCAAACCAAGAGGTTCCATTGCAACCAGTGCCCGAAAGTCTTTAAGACAAAACACGGTTTTCTCGATCACATGAATCGTCATTTAAAACAATTCGTGGCCGAATGCTCGGAGTGTGGCAAAGGGTTCGTGACGAAACAAGAGTTCGAGGTGCACAACGCCAAAAAACACAACGGCAACCGGGAGATTCTGATCTGTTTCGTATGTGGTCGCACCTGTGTGGACAAGGCCTCCTTGGCGGGTCACCTGAAGACCCACGAGGACGGCTACCACGACGAGAAGTTCTCCTGTGAACACTGCGGCAAAAAATTCGCTCAGAAACGCGGCTTGGACCACCATTACGTGCGCAAACACAAAAACGGCGGTGAGCGATACGTGTGCGACCTGTGCGGCAAAGAGGTCAACTCGTTGCGCAGCCTCAGGGGTCACAAGTTGCTCCACGAAGGTGCCAAACCGCTGCAGTGCCCCGAGTGTCAAAAGTGCTTCGTGCTGGAGACCACGCTTAAGCAGCACATGCTCACGCACACGGGTGCGCGTCCACATAAGTGCGACGTGTGCGGAAAACGGTTCACGCAGCGGGGACCTTTGAAGGCGCACCTGCGCGGACACAGCGGCGAGGTGCCGTACGCGTGCGACATTTGCCACGTGGCATTTTCCACCAAGAGTCAGTTGAATTACCATACGAAGAGTAAACATCATGCTGTGTGA
Protein Sequence: MLSKYLRPFKCLECTKSFFLRSRLKRHMFYHEQNRLRPFKCSQCSKRFMTQRCLRSHLQVHASTEPSFCCNLCDRRFSRKNSLKCHQERVHFLQDRIYCEICGKRFALKHDFQQHYKSMHEKQDKVVCSACGKFYTPSEVIKYPLVSKNQAGEISEFLPRHMQLMHGETGEFPCKRCDQVCKTEGALERHVKTEHRNTLKVCEICGKHVRCLKLHLKIHAGIKDHKCSKCDKAFVRVGALRLHERTHTGEKPYECPHCRQKFTQSGSLRIHVRKLHANREPPTQKSCSLCSKTFKNKRQLVKHMVTHQTERPYTCSLCPKTFKRKYDITCHMVVHGKHRVYNCEFCPKTFKTKQAFMVHHSRHLKEYIATCVECDRGFVTKHEYLKHMDYRHGTNTNICEICGRACYNKNSLINHLKTHDQGHHQKKYKCEYCKKKFNQQRGLAQHYVRIHKDGGQKYVCDVCGKEIHSKPSLVGHMNMHRGAKPNKCPYCEKTFVLKTTMKQHLLTHTGERPHSCTLCGKTFTQRGPLKAHIQSHLGEKPFACDICQAKFVTKAQLNYHMKVKHGQGYKQNNYKDVPIQCPFCQKVCKNDKFLKKHMVCHQDSRPYPCPVCGRAFKRSHEVKNHIASIHEQTKRFHCNQCPKVFKTKHGFLDHMNRHLKQFVAECSECGKGFVTKQEFEVHNAKKHNGNREILICFVCGRTCVDKASLAGHLKTHEDGYHDEKFSCEHCGKKFAQKRGLDHHYVRKHKNGGERYVCDLCGKEVNSLRSLRGHKLLHEGAKPLQCPECQKCFVLETTLKQHMLTHTGARPHKCDVCGKRFTQRGPLKAHLRGHSGEVPYACDICHVAFSTKSQLNYHTKSKHHAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -