Agra046930.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- CAMTA1
- Assembly
- GCA_030068095.1
- Location
- CM057946.1:13555912-13564803[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-15 1.2e-10 43.3 0.1 79 116 45 81 33 81 0.92 2 3 0.51 4.5e+04 -3.6 0.0 25 53 212 240 206 241 0.74 3 3 0.18 1.6e+04 -2.2 0.6 69 69 359 359 310 402 0.61
Sequence Information
- Coding Sequence
- ATGTTTCTAAAACCGACCGAAATTTGTCCGGATTTCGAGGCCGGCGTCCCAGGCAAAAGCGGGGTGGATGTCTGCAATACAAAAACCCTTATTGGAATTACTCGTTTAAGCTTAAGATTACCATTAATTAGACCGtgCATTTATGGATGTTACGTCCATTCGGCCATTCTACCAACGTTTCATCGACGATGCTACTGGCTCCTTCAGAACCCTGACATAGTGTTAGTCCATTATCTGAATGTACCTTACCCGGATGATAACAAACTGGCAGTGATAACACCTAATCTTGCCTTATGGGCTGACAAGAAAGAATGGACTAAGGATGAATTAGTGTCGCAGCTTAAGCCGATGTTTTTCAGCGAAGATGAACCTGATCTTAACAACGAATTAGAAATATCGaattttaaactgCAAACTGCCGAGACTGTTGAAGCTATCGTAAGCCAACTAATGGAAAAGCAAAGAGTTGCTAGGCAGGCAGCACTGGTAAAGCAACTAGAGTGTGGTTGTCCAGACTCCACATGCGCAGACGGAAAGAGTTGCTCCCATCCAATGCGAAGGATCACCTCGGCAAAAGCTGGTTCTCCTTTACCCAGCACTACCGCGAATTCCAGAAACTCTAACTCCAATTCCGAAAGCAACAATCAGGTTTCTTCAACAACTGGCTCGGGATCTCTCCATCTGAATAACCACGGCACTCCAAGGGTATACTCCCGTGATCGAAGCGGTCAGCTTGCTGCTCAGAATAGCAATAATTGTTCCTCCAGCTCTGGCAATACGCCTCCGCTAGTTTTGAGTTTATCTCAAATTCAAGGCAGTGGAGGTCTTTTAATCTTAAACAGCAATAGTAACAGTACAAATCACCAAAACCTCGTCAATCCAGTTTCCGTGGCTAACTTCATGACTTGTAACACGAACCGGGGGATTGTAAAAGATCAACGAACAAGCCATCTAGTCCTTAAACAAGAAGTCATGGACACAAACAACAGCTCTTCGTGTCTACACTCTTCCAACACCACAAAACAAGATAGCAAAAACAAACAACATCGGGACAATAAGATGGAGATTAGCGAGACATTAAGACAATCACTGTTCGAGAGCAATATTTATGGTACAAATAATGTTCAGCAAACTCAACAACAGACTCAAAATCAGCAAAGTCAGTCACACCAGCAGCAACAACATCAGCAACAGCAGCAACAACAGCAGTCAAGAAATAACACGTAA
- Protein Sequence
- MFLKPTEICPDFEAGVPGKSGVDVCNTKTLIGITRLSLRLPLIRPCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPNLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKAGSPLPSTTANSRNSNSNSESNNQVSSTTGSGSLHLNNHGTPRVYSRDRSGQLAAQNSNNCSSSSGNTPPLVLSLSQIQGSGGLLILNSNSNSTNHQNLVNPVSVANFMTCNTNRGIVKDQRTSHLVLKQEVMDTNNSSSCLHSSNTTKQDSKNKQHRDNKMEISETLRQSLFESNIYGTNNVQQTQQQTQNQQSQSHQQQQHQQQQQQQQSRNNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196219;
- 90% Identity
- -
- 80% Identity
- -