Basic Information

Insect: Anthonomus grandis
Gene Symbol: clz9
Assembly: GCA_030068095.1
Location: CM057946.1:30410042-30411987[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-06 9.1e-05 24.3 0.1 2 40 26 64 25 66 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-06	9.1e-05	24.3	0.1	2	40	26	64	25	66	0.94

Sequence Information

Coding Sequence: ATGGTGTGcgcttataaaaaaacatttagccatgtcagaaatggcaaaaattacGTGCCATATAGGCATTACTCAGAGAAAGCCTTAGCCAGAGCAatagaagaagtaaaaaaagggCGGTTAACTTTGGCTAAGGCCTCCGAGCATTTCAAAGTGCCCATCGCCACCATAAGCAGACGTGCTAGGGGGaccaatatatttgaaaaaccgGGAAGACCTTCAATATTTTCCAAGGAAGAAGAGGAACAGTTTGTGAAATACCTAAATATTGTGGCAGCTTGGGGATTTCCCTTTGACATATTGGATCTAAGACTTTTTGCGAAGAATTACCTAGATAAAAAAGGTGTACAGGAGGTTCGTTTGAAGGATAACTTTCCTGGTAGAGATTGGGCATTAGCTTTTCTTAAACGACACGAAAAGCTCATATCAAACCGTCTATCATCCAATATTTCAACTAAAAGAGCTTCACTTTCACCAGAAgttatcgataatttttttgataatgccCGAGATACTTTATTAGCGGTAAATCCTAGTTTAATGATAAATTATGATGAAACAAACCTTACCGACAACCCAGGcactaagaaatatatttataaaagaggATCAAGGTACCCAGAAAGAGTGATAAATTCGACAAAAACAGCCATAAGCTTAATGTATGCTGGTACTGCTGATGGCCAGATATTACCAGTTTATGTAGTGTATAAACGTGAGCATCTTTGGGACTCATGGACTGAGGGAGGCCCTAAAGGTGCCAGATATAATAGGTCTAAAAGCGGGTGGTTCGATTCCGCTCGTTTTCGAAATTGGTTTTTTACTGTGGTagttccattttttaaaaataaacctggAAAAAAGgctctCATTGGGGACAACTTATCTTCTCACTTTTCCGAAGACGTCCTTAAAACGTGCGAGAAAATGGATATTGCATTTATTTGTTTGCCAAGCAATGCGACCCATGTCATGCAGCCATTAGACGTCGCATTTTATTCTCCACTTaagaaatattggcgcgaaattcTGACAACGTGGAAGAAAGGCCAAGGGCGGAAAATGACTACACTCTCAAAAGATGTATTCCCTAGATTGCTTGCACAGCTCCATAACAAGATTGAAGAGAATGgcaaaaaaaggcaaaatttaatCTCCGGATTTGCCAAAACTGGATTGCACCCTCTAAATCCTGCGCAACCAAAGGAAAGATTACCTGCATCGTCCACCACAGGTACAGattctaatattttagattCAAGCATTTCAAGCTCAGTTTTGGATGTCCTAAAAGAAATGCGTATGGGTAGTTGTGAGCAGCGTAAAGCACCGCGTCGCAAGAAGCTTACTGTAGAAGCAGGAAAAAGTGTTTCTACATCTGATTTGTACCCGTCTACTAGTAGAAATGTTTCTGAAATAAGTTCATGCGAATCATCAGATGATGAAGAAGACCAGCTACAAAATATTGACGATGAAGACCTTCcctgttttaatttgaaaaaacctgATAAAGAAATCCAACCAGAAGAACATGATGATGAAAATCAGCAAGAAATAAGTGACGATGATGACCATCCTCTTATAAACTTTAGTAATCTTAAGGTCAATGATTGGGTAGTTGTTCGATACACGGCAACAATTTCAAGCCAATGTTATATAGGACAAATAAAATCCGTTACCCTGCTAAACGGGGAACGGGTTTTCAAaacatcgtttttaaaaaaatcctccaaAACGGAAAGATTTTTATCTCCTCCTAAGTTAGATGAAGACGAGGTAACAACCGAAATGATTATCATGATACTTAGCCCTCCTAAGATTGAAGGTTCAGGGACCAGgcaattttttaccttttcggATAATCTTTCAgaactaaacataaaataa
Protein Sequence: MVCAYKKTFSHVRNGKNYVPYRHYSEKALARAIEEVKKGRLTLAKASEHFKVPIATISRRARGTNIFEKPGRPSIFSKEEEEQFVKYLNIVAAWGFPFDILDLRLFAKNYLDKKGVQEVRLKDNFPGRDWALAFLKRHEKLISNRLSSNISTKRASLSPEVIDNFFDNARDTLLAVNPSLMINYDETNLTDNPGTKKYIYKRGSRYPERVINSTKTAISLMYAGTADGQILPVYVVYKREHLWDSWTEGGPKGARYNRSKSGWFDSARFRNWFFTVVVPFFKNKPGKKALIGDNLSSHFSEDVLKTCEKMDIAFICLPSNATHVMQPLDVAFYSPLKKYWREILTTWKKGQGRKMTTLSKDVFPRLLAQLHNKIEENGKKRQNLISGFAKTGLHPLNPAQPKERLPASSTTGTDSNILDSSISSSVLDVLKEMRMGSCEQRKAPRRKKLTVEAGKSVSTSDLYPSTSRNVSEISSCESSDDEEDQLQNIDDEDLPCFNLKKPDKEIQPEEHDDENQQEISDDDDHPLINFSNLKVNDWVVVRYTATISSQCYIGQIKSVTLLNGERVFKTSFLKKSSKTERFLSPPKLDEDEVTTEMIIMILSPPKIEGSGTRQFFTFSDNLSELNIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00116495;
90% Identity: iTF_00116494;
80% Identity: -