Agra062647.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030068095.1
- Location
- CM057951.1:13597768-13601094[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-16 4.1e-14 54.2 0.0 1 44 11 55 11 56 0.94 2 2 8.5e-17 6.3e-15 56.8 0.0 1 43 383 426 383 428 0.95
Sequence Information
- Coding Sequence
- ATGTCAGCAGTAGCGGGGCGTAGAACGTACACCGAAGATGAGCTCCAGGCAGCCCTTAGGGACATCCAGTCTGGAAAGTTGGGCACCAGAAGGGCTGCAGTCATCTACGGCATCCCAAGATCCACCCTTAGGAACAAAGTGTATAAACTTGCCTTGGAACGGGAGAGGGAGAGTCACCTTAACAGTTCTACTCCTTTGAAACTTGAGGAGGATGAAGGATTGGATGACGATAAGGAACTCTCTGGAACTGAGGAGGAGAAGGAGGTTGAAAAGGCTTTACAGGCTCCCCTGCTGTCGATGGCCGATATTCTCAGGTTCTCCGGCATGGAACACTCACCCGAAGCCATAAAACTCTTTTTGCAGAAAGCGAAGGAGAGCCAAGAGGCTGGATCTTCGCCTCTGGATCAAAGTGAAATCATTCAGTACCTGCAGGTACGAAATGCCCTGATCGCGTCACAAAACATCCTGGCCAATCAAAAACCGCCAGACGGATCAGTATTACACAACATCATTCCCGAGTTAGCCAAAAGGCTGATCGTCGAAGAACACTTGAAAATCCAGAACAACAACGGTGATAGCGAGAGGCTTTTGAGGCCCAGTCCCTCAAATTCTGTTATTACTAAGGTTGAAAAGTCTTTGGAACCCTCCCCGTCGCCCGACTCCGACCCACCCTCGAATGTGATAAAATATCCGTCCTTCCGGCCGACCCCACCCGCCCCTCCAAAAAATGGCTGCGACATTTTTAGTAGGAGCAACTCCATCGACTCTACGAGCGGTAGACTCGTATCGCCTCCCGTAACCAGCGAGTCGAACTCACCGCCCATTTTACCCGGCAAGGGTTTACTTATTAAAGACGTGATTACGCAAAGTATAACGCAAAAATTTCAACAAGGATTAGATCCGGTGAGGAGGCCCTCCATACCCATGGACTTGGAGTTTAAAAGGAGCGGCTTTACGCCACCTTTGGGCGGGTTACCGTCGGTCATCAAGAGTCAGCAGGATGTGAATAGATATCATCATTCGCAACAGCAGTCGCATCAACAGCAGCAGTCTGCTCAACAGAATAAACCTCAGCAGGGAAGTCAAGGGGGACAGCCCTCAGGAGGTAAAGGTACTAGGCCAAAACGTGGAAAATATCGAAATTACGATAGAGATAGTTTGGTGGAGGCAGTAAGGGCTGTGCAAAGGGGTGAAATGTCCGTTCATAGGGCGGGCAGCTACTATGGCGTACCCCATTCAACGTTAGAGTACAAAGTTAAAGAGAGGCATTTGATGAGGCCACGTAAGAGGGACCCGAAGCCAAATCCTGTCGATGAAAAAATCGCCAGCCTTAAGCAAAACGACCTTAAAATTGCCCAGgAAAAGTTGAAGCAACAACAACAGCAACAACAgcagcaacaacaacaacagcAACAAAACGTAATCAAACCTCCTCAGCAAAAATTTCCACCCTCCTCACCGAATGGTATTAAGTTGCCCCTGTTTGAAGCTGCAGCGGGACTAAGTCCTGCAGCAGCTGCGGGACTAGCCTCAGGTACTTATCCACCTCCATTCCCTTTTTGGCCTCACCCTGGTTTCCCTCCTAATCCCATGGAGTACGCAGCTGCTGCGGCTGCCGCAAGAGGTCAGGCCGGTCCTTTCTTGTCTCCCAGTGAGTTTTTCGCCTCCCAAATGATGCAGAAGCTCCAGGAGGAAAGGGAGAGGAGTATGGGCACACCATCTCCTCAAGGTGGGGCTGCCACTTTGGCCAAGAGTGCAAGACAAATGGCGGAATCTTTGCTGGATGGGTCTGGACCCAACGGgtCGTTCCTGGATGGTATAATACGTTCCAGTCTCGAATCGGGGGTGCCAAGCTCCGATGAGAAATCAATTAAGGACGAGAAGAACATTGCACCTGAAAATATGTCGAATAAAGCATTACTGGATCAGCTGTGTAGAAACAGCCGACTAACTCCACTACCAAAGCCAAACTTGACGGACGCTAGTAGCTCCGGGGACGAGTCTTACCGGAAAAGTACAAGTCCTCTTAACTTCTCAACAGGAGTAAGCAACTCGCATAATAACCAAGAGGACTCGAAACCGCATAGATCGTCCCCGCCACCAATCAAAATCGAGAGGAACAATTCGATCGATCACTCGGTCGAACTGTCAAACGATTCGAGTGATTCCGCGAGCCATAACGAGCGTAAGCGAAGTCGAGACGAGGAGTCGACGAACTCGACCGACCACGAGCGGAAACACCCGAGAATCTACCTGAAACAAGACCTGGTCAAgccagaaaatttaaaaccgGAGATGTTGGTGCGATATCGTGAGCTTTTGCCGGAAAGGGGGACATTGAGCAATCAATCTTGTGGTGCATACAGATCTCCAGGTGGAACCGTCATGCCTCACCAAGAGCTGCCAGAGGCCCAGAAAAGCTTAGAAAAAGCCTTTAAACTTCAGGTTTAA
- Protein Sequence
- MSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTPLKLEEDEGLDDDKELSGTEEEKEVEKALQAPLLSMADILRFSGMEHSPEAIKLFLQKAKESQEAGSSPLDQSEIIQYLQVRNALIASQNILANQKPPDGSVLHNIIPELAKRLIVEEHLKIQNNNGDSERLLRPSPSNSVITKVEKSLEPSPSPDSDPPSNVIKYPSFRPTPPAPPKNGCDIFSRSNSIDSTSGRLVSPPVTSESNSPPILPGKGLLIKDVITQSITQKFQQGLDPVRRPSIPMDLEFKRSGFTPPLGGLPSVIKSQQDVNRYHHSQQQSHQQQQSAQQNKPQQGSQGGQPSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKIAQEKLKQQQQQQQQQQQQQQQNVIKPPQQKFPPSSPNGIKLPLFEAAAGLSPAAAAGLASGTYPPPFPFWPHPGFPPNPMEYAAAAAAARGQAGPFLSPSEFFASQMMQKLQEERERSMGTPSPQGGAATLAKSARQMAESLLDGSGPNGSFLDGIIRSSLESGVPSSDEKSIKDEKNIAPENMSNKALLDQLCRNSRLTPLPKPNLTDASSSGDESYRKSTSPLNFSTGVSNSHNNQEDSKPHRSSPPPIKIERNNSIDHSVELSNDSSDSASHNERKRSRDEESTNSTDHERKHPRIYLKQDLVKPENLKPEMLVRYRELLPERGTLSNQSCGAYRSPGGTVMPHQELPEAQKSLEKAFKLQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186925;
- 90% Identity
- -
- 80% Identity
- -