Basic Information

Gene Symbol
ct
Assembly
GCA_030068095.1
Location
CM057944.1:6550064-6579760[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-28 1.6e-23 84.7 0.0 2 72 313 384 312 389 0.95
2 3 7e-32 2e-27 97.2 0.0 3 76 710 784 708 787 0.95
3 3 8.9e-31 2.6e-26 93.6 0.0 3 75 935 1008 933 1012 0.95

Sequence Information

Coding Sequence
ATGTTTCTAGTCCAGGCAGTCGAGCATGTTGTGCAAATTAATCAGCTTCTGGAAGAGGTACAAAGACTGCAGGGGTGCATCACGAAAATCCAAGAATCCTCCATCACCCAAATAACGAGACTGGAAGAGCAGCTGGAACAAAAGAGACAGCACATCGTGCGACTTGAATCCAAATTGGACACCCAAAAAGACTATGACGAACTTAAAAGACAAGTGACCATATTAAAGTCCGATTTAGTCAATAATCCACAAGGCAAAGATATCGAATTGCTCCTGGAAAAGACGAAGATACATCATCATGTGCAAGAACGAGACAAGAGTCCTTCCAGAGAAAGCGAAGGGGTGACGGATCATCAGTCGACACTCCAACCCCCCAACCTGCCCCAATCACCACCCACCACCCTGCCCCATCCCTTCCAAAACGTAGACGCATTCGGCAGCCTCCTCGGCGAGGAAATCGTCTCGTCGTGGCGAAAAAATATCGAATCTCACCAAAAATCACCCGCTTTACCTTCTTCAGATGGTCTGGTGAAGAGCACCACCCCCTTGTTGGACCATACGGGGGCGGAGAAGAGCAGTACCGCCTCCACGCCCCAACCGTTGGACTCCTCGGCTGGGCAACACAGTCCGCACACAGAGAACCTCGTGGTCAACGGTAATCCGAAGAGTCCTCACGAGGACAACAATAACCACAACAACCATAACAATAACATTCCGTTGGCGGCTACTTTTGTGAATAACTTCTTGAGGACTGAGGATTCGCTGAAGAGTCCTTATAGGTTCGAGGATCATCGTTCGCCCTTTAAGTTTGCTGAGGATCTCGGTATGGCTCCTGGTTCGATGGTAGGGAGGCTTGGGGAGAGTTTGATTCCCAAAGGGGACCCTATGGAGGCCCGATTACAAGAGATGCTTCGGTACAATATGGATAAATACGCGTCACAGAACTTAGATACGTTGCATATAGCTCGTAGAGTGAGGGAGCTACTGTCTATCCATAATATCGGGCAAAGACTGTTTGCCAAATACGTTTTGGGGTTGTCGCAAGGCACTGTGTCCGAATTATTGTCCAAGCCTAAACCTTGGGATAAGTTGACGGAAAAGGGAAGGGACAGTTATAGGAAGATGCACGCGTGGGCTTGTGATGAAAACGCCATCATGTTACTCAAGAGCTTGATACCAAAGAAAGATAATTTTTCGTCCTCAGGGAAAGACGGATCGATGCCCTTCGGACGACCCGAATCGGACCTCACGGACGAACGGATCGCCCATATTTTAAGTGAGGCAAACCAGTTCACTCACATCAAAACCGAGTGCGACACCCACAGTAACGAAGACTCCAAATCACCACACGGCTGCAGCAGCCCATTCTCCAAAGAATCCTCACTAAGCAAACGCCTTAAGAAGTACGAAAACGACGACATTTCCCAGGAAAAAGTCGTGAGGATCTACCAAGAGGAACTGGCCAAGCTCATGGGCAGACGCATGGAAGACATTAGGAACCCTAGAGAGGGCGGCTTCCCACAGGGTATGTTTTTCCCACAATTATTCAGCAACATGCCTCTGGATAGATCAGAAGAGATCCGGATGGCCTTCGATGCTTACCATCGCGAACTCGCCAAACTGAATCAAACCCAACCCTCCGCTCAAATGCCTTTGGGATTACTGGCTCTACAGCAACAAGCGTTAGCCCAACACAACCAACAAAGCCAAAGCGCACCCCAACCCTTAACGCAATCCAACGGTGGTGTCCAAGACCTCTCCCTTCCAAAAGACAAAATGAAGATAGTCAACGGTATGGACGAAGTCAGCAAGGACAAAGACGGAGACGACTCCATGTCTAGACATTCCGGAAGCGCATTCAGCTTGGTGAGGCCCAAAATAGAACCTGGAACCGGAGCTGGCGGTAACAGCACTGCTTCCAGCCCTATTGGAAACACTATTCTACCTCCCATGACCCCCACTAGTGAGGATTTCACTGCTTCTGCAGCAGCGTCTCCCCTTCAACGTATGGCCTCGATAACCAACTCACTGATCTCACAACCACCTGCTCAACCTCACCACACCAGCACTCAGCGACCACTGAAGGCTGTCCTACCTCCAATCACCCAGCAACAGTTCGATCTCTACAATAACTTAAACACGGAGGATATCGTCAAGAAAGTGAAAGAACAATTGAGCCAATACTCGATCTCTCAGAGGCTGTTTGGAGAAAGTGTATTGGGATTGAGCCAAGGGTCAGTGAGTGACCTTCTGGCACGCCCAAAGCCTTGGCACATGTTAACGCAGAAGGGCAGAGAGCCTTTTATTAGAATGAAGATGTTCCTTGAGGATAATGACGCGGTCCATAAGCTGGTCGCTAGCCAGTATAAAATTGCCCCCGAGAAATTAATGAGGACTGGAGGATATGGCAATGcttGTGCAGCGTCACTCTCCAAACCAACGCTTCCAACCAACCCAAAAATGCTGTCCGAAGCAGCCGGTCTACTAACCAAAATGCAACACGACTCTCAGAGTCTTCTTCCGTCGTCTCTGCAACTGGGTCCACCTCAAGGTGGCCAACCTCAACCTTCACCACTCGGTCCACCAACGACAACCCAAATGCCCCAGACCCAACTACTTAATCACCTTGCTCTTCCACCCCACCACGCTATAGCCTTGCAGAACCAAGAGCTGCTGAAGAAACAGCAGCAGAGCATGCAGGGAGGACATGGTATTCCGAACCACTCGCCCATGGGCCATCAAGGGATGAGGGGAATGCACCAGCATATGAGTCCAAGTGTGTACGAGATGGCCGCTTTGACACAAGACTTGGATACGCAAGTGATAACTACCAAGATCAAAGAGGCTTTATTGGCCCATAACATTGGACAGaagATTTTTGGTGAGGCAGTTCTCGGTCTATCTCAAGGGTCTGTAAGTGAACTTCTCTCGAAACCGAAACCTTGGCACATGCTCTCGATCAAAGGACGAGAGCCCTTCATTCGGATGCAACTGTGGCTTCAAGACACCCACAACGTCGATCGGCTTCAAGCCTTGAAAAACGAGAGGAGGGAAGCGAATAAGAGACGAAGAAGCTCAGGCCCTGGACATGATAACTCCAGCGATACCTCGAGCAACGACACCTCTGAGTTCTACCATTCGAACAGTCCAGGACCCCAAGGGCCTCCAAACGCTAAGAAGCAACGTGTGTTATTTAGTGAGGAGCAGAAGGAGGCTTTGAGGCTCGCATTCGCTCTGGATCCCTACCCCAATGTTGCTACAATTGAGTTTTTGGCGCAGGAGTTGAGCCTTAGCAGCAGGACGATCACAAACTGGTTCCATAACCACCGCATGAGACTGAAACAGCAAGTTCCCCACGGTATGCCATCAGACATTCCTCCACGTGACCAAAACTCTTCCCAGCAACCATTCGATCCAGTGCAGTTTAGAGTGCTACTGAACCAAAGACTAATGGAACTAAGCAAAGAGAGGATGGGGCTTTCGGGGGTGCACCTACCGTACCCTCCTTATCTGGCAGCTAATCCTGGACTGGCAGCTTTGATTTCCAGAGGTCTTTTACCCACCGCTGACCTGGGCGACCTCTCGGCCTTAAACAATGCGGTTAAGGAACAAATGAGCGGGTTGGATCTGAGTATGACCTCACTGAAACGAGAACCCAACGAATTCGAAGATGAGGACGATGTTGAATCGAATGTCGGCTCTGAAGACTCGAATATCTCTGGGAGTTTGCAAGACGACGGCAAGAATGAGAGCGGCAAAGAAGCAAATATTTCTAGtGCAAGTCAAAATCAAGGAAGGTCTTCCAGACGAAAACCCGCCGCTCCCATGTGGGTGAACCCCCACtgggaagaagaaaaaaacaccCAAACCCAAGAAAAAAGCCAAAGCAACCAAGACGAGGTCATCATCAATGGCGTCTGCGTGATGCAAACCGAAGACAATTACAACCCTCGGAGAAGTTCAACTGAAGAAACGATCCGAGTGGAGCCTCAAGCGGTCCTGGACCGATACGAAGATGACCGAAGTGACACGAGTAGCGTGAGTCACGAGGCGTCGAACGTGCACGACGAGCCGAGCCAACCCGAGGAAGTCGGAACGGCCCAAACGGAAACGACCGAAGAAGACCGAGACGAAAACAGCGAAAGAAAAGAGGTGAAAACTGAAAACGAGGACGAAAGGTGGGATTATTGA
Protein Sequence
MFLVQAVEHVVQINQLLEEVQRLQGCITKIQESSITQITRLEEQLEQKRQHIVRLESKLDTQKDYDELKRQVTILKSDLVNNPQGKDIELLLEKTKIHHHVQERDKSPSRESEGVTDHQSTLQPPNLPQSPPTTLPHPFQNVDAFGSLLGEEIVSSWRKNIESHQKSPALPSSDGLVKSTTPLLDHTGAEKSSTASTPQPLDSSAGQHSPHTENLVVNGNPKSPHEDNNNHNNHNNNIPLAATFVNNFLRTEDSLKSPYRFEDHRSPFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKDNFSSSGKDGSMPFGRPESDLTDERIAHILSEANQFTHIKTECDTHSNEDSKSPHGCSSPFSKESSLSKRLKKYENDDISQEKVVRIYQEELAKLMGRRMEDIRNPREGGFPQGMFFPQLFSNMPLDRSEEIRMAFDAYHRELAKLNQTQPSAQMPLGLLALQQQALAQHNQQSQSAPQPLTQSNGGVQDLSLPKDKMKIVNGMDEVSKDKDGDDSMSRHSGSAFSLVRPKIEPGTGAGGNSTASSPIGNTILPPMTPTSEDFTASAAASPLQRMASITNSLISQPPAQPHHTSTQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDNDAVHKLVASQYKIAPEKLMRTGGYGNACAASLSKPTLPTNPKMLSEAAGLLTKMQHDSQSLLPSSLQLGPPQGGQPQPSPLGPPTTTQMPQTQLLNHLALPPHHAIALQNQELLKKQQQSMQGGHGIPNHSPMGHQGMRGMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLAHNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLQDTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTSEFYHSNSPGPQGPPNAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELSLSSRTITNWFHNHRMRLKQQVPHGMPSDIPPRDQNSSQQPFDPVQFRVLLNQRLMELSKERMGLSGVHLPYPPYLAANPGLAALISRGLLPTADLGDLSALNNAVKEQMSGLDLSMTSLKREPNEFEDEDDVESNVGSEDSNISGSLQDDGKNESGKEANISSASQNQGRSSRRKPAAPMWVNPHWEEEKNTQTQEKSQSNQDEVIINGVCVMQTEDNYNPRRSSTEETIRVEPQAVLDRYEDDRSDTSSVSHEASNVHDEPSQPEEVGTAQTETTEEDRDENSERKEVKTENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00443834;
90% Identity
iTF_00115582;
80% Identity
iTF_00115582;