Agra044900.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- Tfcp2
- Assembly
- GCA_030068095.1
- Location
- CM057945.1:21923645-21925282[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.6 1.8e+04 -3.0 0.0 112 135 78 97 51 103 0.54 2 2 9.8e-38 2.9e-33 117.3 0.0 17 156 129 261 112 262 0.87
Sequence Information
- Coding Sequence
- ATGCCTCAGTGGCAAGTGGATGATTATGGAGATATTCATCAGGATATTGACAGCTCTTTGAATCTGGACTCGGAGTTGTCCGGTGGTGCGTATACAAATGAAACGATATTAGCCATAAACGGTATGACGGTGTTTAAGCAAGAAGCGCCTTCGCCTACCACCCTTAACGATGTGGTGCACCTGCAAGTGGCCCACCACAATCGGCAGAGTCCCACGTCGACCCAGCAGGGACCCATGGTCAATCCGATAAATAGCACCATGGAGGAAAACAGCCAGAACGTGTTTAGCAACACGATTAACCAGCTGCTAAACCATAGCGCCCTTGCCGGTCTTCAAAGCGTTATGGATGgAAACAATTTAACTACCTCTACAGACAACTACACAGTTTCCTCAACGAACTACAGTCTCCTGGAAGACTGTCGCTTTCAATACGTCCTAGCGGCAGCCACCAGCATAGCCACAAAGCAAAACGAGGACACCCTCACTTACCTAAACCAAGGACAAAGCTAcgaaatcaaattgaaaaaacttgGTGATTTGTCGATGTATAGAGGGAAACTGTTAAAGTCTGTGGTGAGGATTTGTTTCCACGAAAGACGCCTGCAATACATGGAAAAGGAACAAATGGAGTCGTGGCAGAAAGCGAGACCGGGCGATCGGATTTTGGAGGTCGACATACCGCTGTCTTATGGTGCCTTTGATATTTCTCAACCGTCGAGTGCCTTGAACGTTATTAGTTTTGTTTGGGATCCTACGAAAGAAGTTGGCGTTTATATTAAGctggaataa
- Protein Sequence
- MPQWQVDDYGDIHQDIDSSLNLDSELSGGAYTNETILAINGMTVFKQEAPSPTTLNDVVHLQVAHHNRQSPTSTQQGPMVNPINSTMEENSQNVFSNTINQLLNHSALAGLQSVMDGNNLTTSTDNYTVSSTNYSLLEDCRFQYVLAAATSIATKQNEDTLTYLNQGQSYEIKLKKLGDLSMYRGKLLKSVVRICFHERRLQYMEKEQMESWQKARPGDRILEVDIPLSYGAFDISQPSSALNVISFVWDPTKEVGVYIKLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -