Acar016513.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- pnr
- Assembly
- GCA_905404175.1
- Location
- FR989953.1:259235-269604[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 2.4e-14 53.0 4.1 1 35 109 142 109 143 0.97 2 2 2.7e-18 1e-14 54.1 6.0 1 34 163 195 163 197 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCGGCGGCGGCGGCTCGTACGGCGGCGACTGCGCGGAGGGCTACGGGCTCGGGTACAACGGGCGGCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGACCTGGCACCACCACACCCCGCACCACGACTCCTACGGCGGAGGCAGCGTGGGCGGCGTGGGTGGCGTGGGCGGCGTGGGGGCCGTGGGCGGCGTGGGCGGCGGGCTGTACGGCCAGAACATGGTGATGGGCTCCTGGTGCGCGCCCTACGACGCGCTGCAGCGCCCGCCCGCCTATGATGGCGTGCTGGAGGCGTACGAGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGGGACTCGACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGAGTGAACCGGCCCCTCGTGAAGCCGAGCAAGCGGCTGTCCGCGGCGCGGCGGCACGGGCAGTGCTGCACGAACTGCGGCTCGCGCAACACGACGCTGTGGCGCCGCAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAACAGGCCCTTGGCTATGAGAAAAGATGGCATACAGACCAGAAAGAGGAAGCCCAAGAAGTCGGCAAACGGTACGAAGCCTTCGCAAGACACGCCAAAGAAAGACGGGCACGGCTCGCCAGGCATAGACGATAGCAAATCGAGTATATCAGAAGTGCCCTTACCCCTGACCGCGTCGATGTCCGTCCACGCGGCCAAGCACCCGCGCGCCGAGGCCCTGGGCCCCAGCAGCGCGTCGCCGCACGCGCAGCCGCCGCAGTACCCGCTGGCCGTCCCCTCCAGCACGGCCTTCCTCTCCACCCCCTCCCTGTTCAACATCAAGAGCGAGCCCAGCGCGGCCGCCGGCTACGAGGGGTACGCCGCGCACCCCGCGCACGCCGCGCACGCCGCCGGCGGACCGTACCACTCGCAGCAACATTATCTACACGCGTTGCAGTATGGTTTAAGTAATGGTGAGGAAGAGGAAGGCAGTGGGTTCCTGCACCAGCGCAACGTCACGGCACATGCGAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MFGGGGGGSYGGDCAEGYGLGYNGRLQQYAAHFAPHQTWHHHTPHHDSYGGGSVGGVGGVGGVGAVGGVGGGLYGQNMVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGTKPSQDTPKKDGHGSPGIDDSKSSISEVPLPLTASMSVHAAKHPRAEALGPSSASPHAQPPQYPLAVPSSTAFLSTPSLFNIKSEPSAAAGYEGYAAHPAHAAHAAGGPYHSQQHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495453;
- 90% Identity
- -
- 80% Identity
- -