Acar020019.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Znf541
- Assembly
- GCA_905404175.1
- Location
- FR989968.1:4184258-4193190[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 1.4e-06 28.7 0.0 2 46 655 699 654 699 0.96
Sequence Information
- Coding Sequence
- ATGGATTGGATCACGCAACTTTTTCATACACCTACATTTGCCAAACCACGGGCTCAGCAGGGAAGTCCGAAATGTGGCAGTAGCACATCTGCGACTACAGTTTCATCAAGTATCACGAGCGTTTGTGGTAGCGTGGCACGGTCCAGTGACGTTAAACCAGTCGAGTGTAATCTCTGTCATCGCAAGTTTAAAAATATACCAGCTTTAAATGGACATATGCGACTACATGGAGGCTATTTTAAAAAGGATTCCGATAATAAGAAGCTAGACAAGAAAGAATCTACTGGTCCTCCGTTACAAACTGCATCAGTCTCTGTGCGGGCGCTAATAGAGGAAAAAATAATCAGTCGCCGAGGAGCGACATCAACACAATCTACAGGAATGGCAATAGATACATCTCGATCAGGGTTCGCCACCCCAGCGCCCCCGCCGTTATTGAACATTCGTACATCGTCAGCTTCACCAGCACCACCAGTGACGACATCAGTCCACTTCGTATCACCGAAAGCACCGGTAGTCACGTTTGCTACGAACGTTACAGGGAATATAACCTCTGCCCACAGAGATTCAACGTTAATTGAACTTTTAAAAAAAGGCAATTCGAAGGTTGTGAAACGATCTGCATCAGATCCGGGTCAGTGTTCACCACAACAGGAATTTACTTTTCGACCAGAACTATTCGGAGTATCATTCAATTCAGACGACGGGTACTTCTCGCCAGCTCTTAATGAGGATACGTTCCAGTTTGCTACGACAGCTGATCAATTAGATGAACTGGCATCGCTGGAAGACTATGCAACAGTAGCGGCGTCGATACATGAACGTTCCCCAGTCTCATTCCCGTCCAATCGGCGTTTAGCCGCTGTACTTAATTCTCCTTTACCAGAATCATTAGCTGATTTTGGTGCTTGTCACGATGGCTCCGCCGTACCTTCGCCCGGCCTTCCTGGATATACAGAACATTCTCCAAGCCTTTCTTACTCAACTGGCGATTCTCCAGGCTTAGCATACACAGCGACTTCGCCAAGCGGAAGTTACTCAACGCACCCAACACCGTCTCCTGGTCTAGCTTATCCAACACCTCCAGCATCCTTAGATGCACAATCACCAGCGCACACTGTTCCTAGAGTTTCGTCTCCACTTACGGCAGCATTTTTCACCGCCACTATGTCTAGTCAAGAAGAGGTAGAAGAAGCTCTAGAGGAAGTATTACCCGATGAATGTAGGTCCCTAGATGCATATGCATTACAACCATTGCCCACACAACGACGGATGATGCTCAATTCCGAAGATCCTCTACTTTCAAGTAGTCCCCGTGATTTCCCTCATCAAAGGTCGATGAGACGTCAGAACCGTTCGATTACACCTATTCCTAGCTCGCTGCAACAGTGGCAATCAGACCATAATTCACTTCAGGTGTGCGTGGAAGGTCGAGACGCCGTGCCAGCTGTATTCCTCAGTCCAAACAGCATACCAGCATCTCCACAGCGACGGAAAAGGAAAGCGTCACCCGCGGGCCCGTACCGGTCGCGCATGCGTCGTTCGACAGTCCACTACACGCCGCAACCGATTCTACCCCCTGATAGAGACGCTCCAGGCCTTTACGTCGATTTTATTAACGGTTTATCAAGTACAGAAGCTGAAGTATTAGCGCAGTTCGAAGACAACCAACAGCCTCAAATAAATATCGGCGCTGAGCACCAAGCTGATATTCCGGAGTTGTGTACCGATCGCATCGACCTGCACCGCGTGCCTGAACAGCTGCTGTGGGACCCTGGTATCAATGACGCTCTAGATGACAATGAAGTTCGAATGTTCATGGAGCTTGCGATGTGTGCGGCCATGCCAGTCGGCGGGCACACGAGGGAGTTCGCGCTGCAGACGCTGGGCGAGTGCGGCGGCGACATTCGCGCGGCCACCTTGCGTCTCATGTCACGACCCGCTGCGCCCACGCAGTACGAGTCGCGGTGGACGCCGGACGAGGTGGAAGCCTTCTTAACTGGACTCGCGCACTACGATAAAGACTTTTATAGGATTTCGCAGTTGATAAGAACAAAGGATTCGAAGCAATGTATCCAATTCTACTACTTCTGGAAGAAAGTGACCAAAGACTATAAAATGTTCTTACGAAGCTGGAGCGACGCGCGACTAACACATGGTACGTTTGGCCAAATCCACGCTGCACCGAGCACCTCGTCTCCAACCTCCTTCGAAGGAGAGGAATACCCGTGCAAGATATGTGGGAAAGTATTTAACAAAGTAAAAAGTCGTAGCGCACACATGAAGTCGCACCGGCCTCTCGACGCCGAGCCCAAAAGGCCTAAACTCGAAAAGCCTTATGAAAAGGTCGAGAGATCTGATGACAGATCCCAAGCGACTGCTGAATACCAAAATAAGATGCCTCCACTATAA
- Protein Sequence
- MDWITQLFHTPTFAKPRAQQGSPKCGSSTSATTVSSSITSVCGSVARSSDVKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDNKKLDKKESTGPPLQTASVSVRALIEEKIISRRGATSTQSTGMAIDTSRSGFATPAPPPLLNIRTSSASPAPPVTTSVHFVSPKAPVVTFATNVTGNITSAHRDSTLIELLKKGNSKVVKRSASDPGQCSPQQEFTFRPELFGVSFNSDDGYFSPALNEDTFQFATTADQLDELASLEDYATVAASIHERSPVSFPSNRRLAAVLNSPLPESLADFGACHDGSAVPSPGLPGYTEHSPSLSYSTGDSPGLAYTATSPSGSYSTHPTPSPGLAYPTPPASLDAQSPAHTVPRVSSPLTAAFFTATMSSQEEVEEALEEVLPDECRSLDAYALQPLPTQRRMMLNSEDPLLSSSPRDFPHQRSMRRQNRSITPIPSSLQQWQSDHNSLQVCVEGRDAVPAVFLSPNSIPASPQRRKRKASPAGPYRSRMRRSTVHYTPQPILPPDRDAPGLYVDFINGLSSTEAEVLAQFEDNQQPQINIGAEHQADIPELCTDRIDLHRVPEQLLWDPGINDALDDNEVRMFMELAMCAAMPVGGHTREFALQTLGECGGDIRAATLRLMSRPAAPTQYESRWTPDEVEAFLTGLAHYDKDFYRISQLIRTKDSKQCIQFYYFWKKVTKDYKMFLRSWSDARLTHGTFGQIHAAPSTSSPTSFEGEEYPCKICGKVFNKVKSRSAHMKSHRPLDAEPKRPKLEKPYEKVERSDDRSQATAEYQNKMPPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00115349; iTF_00710978; iTF_00710165; iTF_01204836; iTF_01204502; iTF_01205655; iTF_01206167; iTF_01205337; iTF_01203995; iTF_01203197; iTF_01203680; iTF_01206992; iTF_01206509; iTF_01202423; iTF_01202893; iTF_00357452; iTF_00358524; iTF_01193549; iTF_01194022; iTF_00431103; iTF_00430611; iTF_00771039; iTF_00771503;
- 90% Identity
- iTF_00115349;
- 80% Identity
- iTF_00115349;