Acar007169.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Snapc4
- Assembly
- GCA_905404175.1
- Location
- FR989972.1:4717645-4720008[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.9 2.4e+03 -0.9 0.0 22 33 225 236 221 240 0.85 2 5 9.3e-09 1.2e-05 25.7 0.0 1 44 256 301 256 303 0.94 3 5 7.2e-08 9.3e-05 22.8 0.2 3 44 311 356 309 358 0.95 4 5 4.8e-10 6.2e-07 29.8 0.0 1 43 362 404 362 406 0.97 5 5 1.4e-10 1.9e-07 31.5 0.0 3 45 414 458 412 459 0.95
Sequence Information
- Coding Sequence
- ATGAGTTATATTGAATTCGAATATGATACCGACGAAGAAGCTGAACTTGAAGAATTGCGCCAATTAAAGGCGGCGTTAGAGGATAACGATGCCGGTCCCAGTAGGGCTGATTCCCAGTTATCTGTTAATACAAAGCTACAATCTACCTGTGATACCTTAGAAGATGGCTTCTCAGACATAAATACCGCAATAGCTCTTAATAAATTATACGATCAAAAACTTCAATCCTTTGAAAAAATGCTCCATAATCGTTTACGTGAGTGCCGGAAACGTTTAGAAGAAGTGCAAGGGATGGTAACAGAAAAACCAACTGTTGCACCTTTTCACTACGTAACCTGTGGAAAACCTTACTTCAAAGACAGAAATGGCTTTGCTGCGCCTGAAAATATTGACACTTTACTGAGGAAGGAAGCTGGAATGTATGATTATTCTATTATACAATCTATCACAGGGTGGACCTTACGAGATAAAAATAACTTTACAAAATTAATTCTTAAAATCTCACAAGATTTGAAACAAGAGGAATTAAAATCGAAGTTAGCAGAATTAAAACGCCAAGTAAAATTACAAAATAAAGATTTCTGTAGCCAAATATCAAAGTTAAAAAGAGAAATTAGCCAAGTAAATAAAAAGTCTCTAAAAGAATTGGCCTTACCACTTGACCAGGAGTATGACTGGTACTCTATTGCTAATAAATTGAACTTGAGACACAAGCCCCAAGAGTATAAGGCACTTTGGAAACTTTTTTTACATCCAAATATAAATAAAAGTGCATGGTCTAAAAAAGAGCATAATAAGTTACAAGAAATTGGAAGCAAAACAGGATTTCAAGGATGGGAACCAATTGCTCAAGAACTCGGGACTGGCCGTTCACCTTATCAGTGTTTTGTTTACTTTCGTACTAGTATGGTAAACCCCCAAATTTCACGAAAGTGGACCAGGGAAGAGGAGGAATATTTAAAAAGGTTAATCGACTATTATCGGCTTGGAAATTATATTCCATGGACAAAAGTCGTTTCATCTATGGAGAACAGGACTAGAATTCAAGTATACAATAAATATTTGAGACTTACAGAAGAACGAAAAGGTAGATTTTTACCTGAAGAGGATGCTATAATTCTTACATTTGCAGATAAATATGGGCCTGATTTTAAGAGGATGAAATGGTATCTTCCTGGACGTTCCTTGTCACAGTGTCGTGTACGTTATAATGTGTTAACTAAGAAAAGAATGACTACAGTATGGACCATTGAAGAAGACAAAAAGTTGGTACAATTAGCTGCAAATGAAGAATCTCCACGGAACTTCTCCAAAATTGCTAAACATTTTCCAGACAAGGACAGAGTTAATATACGTGCTAGATATATGACATTGGAAAAATGGATGATGCGTCATCCTAACATAGATATTGAACACGCACCAAGAAGAGCTTCTAGACAAATAAAACGAGGAAACAAAACAGACAATTTAAATAAAGCTATCAACAATTTAAAGCAAAGAATGGAATCTGAATTAGATGTTAAAAAGGATGAAGTAGTTACTCAGCAGTCATCAGAAGAAAAAATTGAAGATGCAATCATTAGTCTTCTAGTTAAAGAGCAAATAAAGATTGAAGAACTTCAAAAATACAAGCCTCTTGCCGGAACAACAAATGAAATAAATGTAAATAGTGCCATAGAAAGTGAAAGTTTACAAATGAAAGAAAGTGATATAAATGTGAAACATTTAAGACAAATACTTATATTATTAAGAGCAAAGTTAAACAAAGAAAAATTCATGAATAGCTCTATAGGCAAAAGATATTCTCAATTGCTTGAAAATGATAAAGATGTTTTTGTGTCAAGAACAAAATCCTACTCAAAAAAGGCAATGGCTACAGTTACTGAACACGGTAAAGACTTTCCTGATATTTGGGGCAAGAACTGTTTGGGTCCGTCACAGTATGTACTACCACCTAATTATGCAACTATCATAGGATGTAGAAAACTAATGAACTATATTACTGATTCACTTGAAAACAGTGAGGTTCGATATTTAACAAAATGTATTAACCATAATCGCATATTGAGAGATGAAATGCAATTATTACTTACAAGATTCTATACATTGTTTCTTTGGCCAATGTTATTGTCAAATCATATGCCACCAGAAACTAAACCTTTAGTTTATTCAGAAACTAATTTTGAAAAGAAACCTTTTCGAAATGAGTACCCAATGGTGTTTCAAATGGAAGATTATAGTTTAGCTATACCAAAGGAGGGAAAGGACAGCAAAATAATAAATGAAGTAATTGACTTACCTGATGATAATAATGAAGCCAAAATAACTATAAGTGAAAATTTTAATTGTTTTGATGATGTTTAA
- Protein Sequence
- MSYIEFEYDTDEEAELEELRQLKAALEDNDAGPSRADSQLSVNTKLQSTCDTLEDGFSDINTAIALNKLYDQKLQSFEKMLHNRLRECRKRLEEVQGMVTEKPTVAPFHYVTCGKPYFKDRNGFAAPENIDTLLRKEAGMYDYSIIQSITGWTLRDKNNFTKLILKISQDLKQEELKSKLAELKRQVKLQNKDFCSQISKLKREISQVNKKSLKELALPLDQEYDWYSIANKLNLRHKPQEYKALWKLFLHPNINKSAWSKKEHNKLQEIGSKTGFQGWEPIAQELGTGRSPYQCFVYFRTSMVNPQISRKWTREEEEYLKRLIDYYRLGNYIPWTKVVSSMENRTRIQVYNKYLRLTEERKGRFLPEEDAIILTFADKYGPDFKRMKWYLPGRSLSQCRVRYNVLTKKRMTTVWTIEEDKKLVQLAANEESPRNFSKIAKHFPDKDRVNIRARYMTLEKWMMRHPNIDIEHAPRRASRQIKRGNKTDNLNKAINNLKQRMESELDVKKDEVVTQQSSEEKIEDAIISLLVKEQIKIEELQKYKPLAGTTNEINVNSAIESESLQMKESDINVKHLRQILILLRAKLNKEKFMNSSIGKRYSQLLENDKDVFVSRTKSYSKKAMATVTEHGKDFPDIWGKNCLGPSQYVLPPNYATIIGCRKLMNYITDSLENSEVRYLTKCINHNRILRDEMQLLLTRFYTLFLWPMLLSNHMPPETKPLVYSETNFEKKPFRNEYPMVFQMEDYSLAIPKEGKDSKIINEVIDLPDDNNEAKITISENFNCFDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -