Basic Information

Insect: Anthocharis cardamines
Gene Symbol: ct
Assembly: GCA_905404175.1
Location: FR989970.1:1306044-1340320[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.4e-27 3.9e-23 81.6 0.0 3 70 328 396 326 403 0.94

2 3 3.1e-32 3.6e-28 97.8 0.0 4 77 720 794 718 796 0.96

3 3 5.6e-31 6.5e-27 93.7 0.0 3 75 917 990 915 994 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.4e-27	3.9e-23	81.6	3	70	328	396	326	403	0.94
2	3	3.1e-32	3.6e-28	97.8	4	77	720	794	718	796	0.96
3	3	5.6e-31	6.5e-27	93.7	3	75	917	990	915	994	0.95

Sequence Information

Coding Sequence: ATGCATCTTCACGGCCGACCGCTCCGGCACCTGCAACAATTGATATCTTCCGAAGGTCAGACAATTACACGTTCCAACTCTGCCGTACTCATCGCCCAACTAGTAGAAGACGTAAGGCGACTCCAAGCTTCGCTGTCAGCGCTGCAGGAAGCGCACGCGCAGCAGTTGCAGCGGCTGGAAGAAAGACTAGACGAGAAGAAACAGCACATAGCCAGGCTCGAGGCTAGATTAGATACGCAACGGGACTACGATGATATCAAGCGAGAAATCAGTTTAATCCGTTCTATGGAGTTAGCAGAACGTGAACGAAAGACTGAACCGCTTCGTTCACCAGCTCAACCGTCTCGCTGCGAAGAACGAAGTTCCGCAGAGCGAGAACGAAGTATGGAACGGAGAGACACAGCTTGGAGCATCACGTATGCCGCTAGGTTAACTAAAAAACAGAATATTTTTATGTCCAAATTTCCCAAAACTCACGTTCACGTAATCTCTCGTTTAACAAGTAGAGCCTTCAAGCGGTACGCTAGCCCTCATTCCCACCACCTACAATGCGGCTCACGGACGCGCGTAACCAGCGCTAGGGCAGAACGCGAACATCAAACGCGCCGCTACTCGTACGCCGTGCGACGCTTACGAGCGTACGTGAACCCACCCCGCCCCCCTTCACCACCCCGCCCCTCCTCTAGCTCCCGCGTAACCGTGCTAATAACTGCAGGTGCCGAAGACTGGCCGACGACGCCGCCCCCGCTCAACAACAATACCACACATCACAACAACAACGGCCCAGTACCGCTCCCGTTGCCGCCGCCGAGTCCTTTCCGCTTCGAGGAACACAGGCCGTACCGCTTCGCTGAAGATATGGGACCTCTACCGCCTGGAGCGCTCGTTGGACGGCTAGGCGACTCGCTCATCCCCAAAGGAGACCCGATGGAAGCACGCTTGCAGGAGATGCTCCGGTACAACATGGACAAATATGCAAATTCGAACCTTGACACCCTCCACATAAGCAGACGAGTGCGTGAATTACTATCAGTACACAACATCGGCCAGAGGCTTTTCGCTAAGTACGTGCTGGGCCTGTCGCAAGGAACTGTATCGGAGCTGTTATCGAAACCGAAGCCCTGGGACAAACTGACCGAGAAAGGACGGGATTCTTACAGGAAGATGCACGCGTGGGCGTGCGATGAAGCTGCTGTCATGCTCCTGAAGTCGCTAATCCCTAAAAAAGTTGGGACAAAAGATGGCACAGCAGGCGCAGGGTTTGGAAGGTCGGATGGTGAGGGAGACGAAAGGCTGGCTCATATCCTTACGGAGGCTTCCCACATGATCAAAACACCAACGGGTCCAATCAACAATGATGACTCCAGTACATTGATGAGTAACGAAGATTCCAGTTCACCCCGCACACAGTGTCCATCGCCATTCTCTAATAAGGATTCAAGTCAAAACAGAAGGCTGAAAAAATATGAAAATGACGACATTCCTCAAGAGAAAGTAGTTCGTATATATCAGGAGGAGCTCGCTAAAATCATGACGAGACGAGGTGACGACATGAGGCACAACCGGGAGGGCTTCCCTGGTGCTGGCATGCCCCCTCACATGGAACGGCCTCCCGAAGACATTCGCATGGCGCTAGAAGCCTACCACAGAGAACTTGCCAAGATCCAGTCCGGAGGCAACATCCCTCTGCATAACCTCCCTGGAATGCCTCCCTTTCCGAACCTCATCGCCCTTCAACAAATGCAGGTTCAAACTCACATAAACGGGTCCGGAGCTATCCAAGACCTCTCCCTTCCTAAAGATAAAAACGCCAAAATAAATGGAATGACTGATAGTGATAAGGACAAAATGGACGCTGAGGAAGCTATCCGGCACGCGGGGAGCGCCTTCTCTCTGGTCAGGCCGAAGTTAGAACCGGGACAGCAATCTACTGGGTCTTCAGCGTCCAGCCCGCTTGGGAACGCGATACTTCCCCCCGCGATCACACCAAATGATGATTTTAGCAGCTCAGCAGCAGCCAGCCCCCTACAAAGAATGGCTTCTATCACCAACAGCCTGATCTCCCAACCACCTAACCCTCCCCACCACACTCCCCCCCAGCGATCCATGAAAGCAGTGCTTCCGCCGATCACTCAGCAGCAATTCGATCTCTTTAACAACCTGAACACAGAAGATATTGTGAAACGGGTCAAGGAGGCGTTGAGCCAGTATTCAATAAGTCAGAGGCTGTTCGGGGAATCTGTGCTGGGCTTGTCGCAAGGGTCGGTGAGTGACCTGCTAGCGAGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGGCGGGAACCGTTCATCCGCATGAAGATGTTCCTGGAGGACGACAACGCGGTGCACAAGCTGGTCGCGTCGCAGTACAAGATAGCGCCCGAGAAGCTCATGAGGACCGGGAACTATAGCGGAGCACCTGTCTGTCCGCCGAATATGAGCAAGCCGATGCCGCCGACACAGAAGATGATCTCAGACGCCACCTCCCTCCTCAGCAAGATGCAGCAGGAGCAGCTGCTGGGGCCGCACCTGCCGCACCTCCCCCCCGGCCCGCTGCTGCTCACGCCCCCCGGCTTCCCCCCGCACCACGCGGTCACCCTCCCCCCGCAACACCACGACAACAACAAGGAGCGGAAACCACCTCCCCCGCCGCAACACCACCAGCCGATGCGAGCTCTCCACCAACACATGTCCCCCAGCGTTTATGAAATGGCTGCGCTCACACAAGATCTCGACACTCAAACCATAACGACCAAAATCAAAGAAGCACTCCTAGCAAATAATATCGGACAAAAAATCTTCGGCGAAGCGGTATTAGGACTCTCGCAGGGCTCCGTCAGCGAGCTCCTCTCCAAACCGAAACCTTGGCACATGCTCAGTATAAAAGGACGGGAACCGTTTATAAGAATGCAATTGTGGTTGAGCGATGCACATAATATCGACAGACTTCAGGCGTTGAAGAACGAGAGACGCGAAGCCAACAAGAGAAGACGATCCAGCGGCCCCGGGCAGGACAACTCGTCGGACACTTCGTCGAACGACACGTCCGAGTTCTACCACTCGAGCTCCCCCGGGCCGACGTCTGGCATTCCGTCCGCGAAGAAACAGCGCGTCTTATTTTCGGAAGAGCAGAAGGAAGCGTTGAGACTCGCTTTTGCTCTCGATCCGTACCCGAACATGCCAACGATAGAATTCTTAGCGGCAGAGTTGGGACTGTCCACGAGAACGATTACAAATTGGTTCCACAACCATCGAATGCGCTTGAAACAACAGGCGCCCCACGGGCTTCCGGCGGAGCCTCCGGCGAGGGAACCGTCTTCCGCTCCCTTCGACCCAGTCCAGTTCAGACTCCTTCTCAATCAGAGGCTACTTGAACTACAGAAAGAAAGAATGGGTCTAGCTGGAGTACCGCTCCCCTATCCGCCGTACTTCGCAGCCAATTCGAACTTCGCAGCGTTAATCGGCCGGGGCCTATTGCGGCCCGAAGACCAGAAGGACACGGCGAGCGGTCTCGACTTGTCGATGCCGCTCAAGCGAGAACCGGACGCGGACGATTTCGAGGACGACGACGTGGAAAGCAATCTAGGTTCAGACGATTCTCTGGACGATGAATCGAAGAATGAACCGAAAGCGACCTCGACGCCGGCGCGGTCGAGTCGGAGGAAGCCGGCCGCGCCGCAGTGGGTGAACCCCGACTGGCAGGACGAGAAGCCGCGGAACCCGGACGAGGTGATCATCAACGGGGTGTGCGTCATGCGGAGCGACGACTTCCGGCGGGAGGCGGAGGAGACGGTCCGCATCGAGCCCTCCCCCGCGCCCCGCGAGCCCTCCCCCGCGGCCGCCCCCTCGCCCCTCGCGCTCGCCCGGGCCTCCCCCGTGCTGCCGGAGGACAAAATAAAAACTGAAACAGACGACGATCGGTGGGAGTACTAG
Protein Sequence: MHLHGRPLRHLQQLISSEGQTITRSNSAVLIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISLIRSMELAERERKTEPLRSPAQPSRCEERSSAERERSMERRDTAWSITYAARLTKKQNIFMSKFPKTHVHVISRLTSRAFKRYASPHSHHLQCGSRTRVTSARAEREHQTRRYSYAVRRLRAYVNPPRPPSPPRPSSSSRVTVLITAGAEDWPTTPPPLNNNTTHHNNNGPVPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGTKDGTAGAGFGRSDGEGDERLAHILTEASHMIKTPTGPINNDDSSTLMSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRGDDMRHNREGFPGAGMPPHMERPPEDIRMALEAYHRELAKIQSGGNIPLHNLPGMPPFPNLIALQQMQVQTHINGSGAIQDLSLPKDKNAKINGMTDSDKDKMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPPNPPHHTPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPVCPPNMSKPMPPTQKMISDATSLLSKMQQEQLLGPHLPHLPPGPLLLTPPGFPPHHAVTLPPQHHDNNKERKPPPPPQHHQPMRALHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGIPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPAREPSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLRPEDQKDTASGLDLSMPLKREPDADDFEDDDVESNLGSDDSLDDESKNEPKATSTPARSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRIEPSPAPREPSPAAAPSPLALARASPVLPEDKIKTETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00114833;
90% Identity: iTF_00114833;
80% Identity: iTF_00114833;