Acar006599.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- -
- Assembly
- GCA_905404175.1
- Location
- FR989972.1:2220876-2222543[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0043 6.2 7.7 0.0 42 85 95 138 75 140 0.78 2 4 0.0056 8.1 7.3 0.8 51 86 197 231 157 232 0.86 3 4 0.017 24 5.8 0.1 50 83 287 319 279 321 0.81 4 4 0.0075 11 6.9 0.0 49 83 386 419 382 422 0.82
Sequence Information
- Coding Sequence
- ATGGATGCAAATAATACTCAAAACCAAAATTACTGGCTTGTCGTTCGCGACGACCACAGTAATGTTATATTTTCCAGTAACAATTTCACAATTCAGAATCCACAAAGTCAAGAAGCTCGGTTTATAGTAGATACAGGTGAAAATCGCCAATATATGCAGGTAGATAGTATACCACCAACAATACAAGAAGACTCCACAAAAGATATCTGTAAAGAAACAGTTCCTATAAAAGATGATAACTTCTGGGACAGAAATAAAGTTAAACTTCTTTTAACACTTTGTCTTCAAAATGGATACAACAGCTCTACTGTGGATCAAATTGACTGGACTGAAATAGCTGCCCTATTGGGAACAACTCCAGAAGAATGTGACAAAAAATTCAGGAACCTCCGTCGCATTTATATTAGATTAATGAAAAAGAAAATGATGGGTAAGGATATCAAATGGAAATACTTCACCATTTGTGAAGAGTTCTTTAAAGACAAACTTACCCCAGCAATGTTAGAACCATGGGAAGATTCTAAAATCAAACAGCTATTAAGTGTATATATTGAAAATATTCACAAATTTCGAGATCCCAATTATTTACAAAAAGATGTATGGAAAGATATTGCTTCTCAATTACAAACTACAGAATACAACTGCTACCATAAATTCAAAAGTTTAAAAAGAACTTACTTTAACTGGCTTCAAAGAAGTCGAGAAACTGGAAAGTTAATTAAATGGACTTACCATCAGTATTTTGAGAGGATATATTATAATTATAACCCTGATATAGGGCCATGGGATAGGAACAAAATAAGACTACTTATTAATGCATATGCAGAGATAGCATATATGTTTAAGAATCCTAAGTATCAGAAAAAAGAGTTGTGGAGAGAAATATCTAGAAAAGTTGGCGAAAGTCCAAGTAGCTGTGATAGAAAGTTTAGGAATCTAAAACAAACATACCTGAGACTTAAAATGCGTATTGATACAGGGCGATCTATCACAAAGTGGAAATACTATAAAGAATTTTCTACAATATTTGATAATGAATCATATTCACTCACTGATGATGGTCAGGAAATAGTTTACAGGGCTGCTGAGCAAGATTATGTTAAAGAACTACTTAATTTCTATATTGATAATAAGGAGAAGTTTTGGGATCCACTAGTAAGGAAAAAGACTTTATGGAGAGCCATTGCAACCAAAATTGGCTTAACATCTGGGGAATGTGATAAAAAGTTCAGAAATCTAAAACAAACATATTTGCGGATGGCAGAAAGGAAACAGATGACTGGAAAAAATAGCAGCTGGCCATATTATTCATACTTTGAAAGAATTTATAATGATAAATCAAAGATATTCAAAAAAGAATGCAAACATGCTTGTGTAGACAATGTGACTTTGAAGGAAATCACTAGTATTGTGAAGGATGCTCATGAAATCAAAGACAAAGATAAGTTTGAGAGGCTTGTTAAAGTTATTGAAGATTCAAATAACATTCAGAGAGAAAGAAACAGAATACTACAAGCCCTTCTGGATAGGGCATGA
- Protein Sequence
- MDANNTQNQNYWLVVRDDHSNVIFSSNNFTIQNPQSQEARFIVDTGENRQYMQVDSIPPTIQEDSTKDICKETVPIKDDNFWDRNKVKLLLTLCLQNGYNSSTVDQIDWTEIAALLGTTPEECDKKFRNLRRIYIRLMKKKMMGKDIKWKYFTICEEFFKDKLTPAMLEPWEDSKIKQLLSVYIENIHKFRDPNYLQKDVWKDIASQLQTTEYNCYHKFKSLKRTYFNWLQRSRETGKLIKWTYHQYFERIYYNYNPDIGPWDRNKIRLLINAYAEIAYMFKNPKYQKKELWREISRKVGESPSSCDRKFRNLKQTYLRLKMRIDTGRSITKWKYYKEFSTIFDNESYSLTDDGQEIVYRAAEQDYVKELLNFYIDNKEKFWDPLVRKKTLWRAIATKIGLTSGECDKKFRNLKQTYLRMAERKQMTGKNSSWPYYSYFERIYNDKSKIFKKECKHACVDNVTLKEITSIVKDAHEIKDKDKFERLVKVIEDSNNIQRERNRILQALLDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770888;
- 90% Identity
- iTF_00770888;
- 80% Identity
- -