Acar010353.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anthocharis cardamines
Gene Symbol
Jarid2
Assembly
GCA_905404175.1
Location
CAJQEZ010000001.1:196337-226270[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-14 2e-11 44.5 0.0 14 89 1236 1308 1228 1308 0.87

Sequence Information

Coding Sequence
ATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGCTCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGCCATCGCATAATCCTGTCGAAGACTCGTCTATTGAGGCCGCTCCTGGTTCTTCTTTCTACAAAGAAGATCCGGTGATGCGGTCCAGTAGGGGGCCATTTCATATGGCCCAGTGGCGCTTCATGCGCGTGGTATGGCTGGCCTTCAAGGCCGGCGAGGTCCGTCGAATTGACGGCGGGCCCCTAACCCTACGTTTCAGGTGTCCGGCAATAGGTAAAACTACCCCAGGCGGGTCAAATCCCGCCGGCCGCTCGGAAGAGCCGCCGCAAAAGCCCCACCGTACTCTGGGGGGGGGGGGCAAACTCCATAAAGACGATGTGGGAGTGAGTAAGGAAGGAGATAACATTGCAGAAGATCTAAGCATGGACGCGAGAGTGGTGCTTGAGCGCCTCCCGTGTATCCCGGTTATTCAGCACTGGGCCAAGGATGATAGTAGGAAAGTCACTGAGCCAACGATAGACAGTGACGACCTCTCCGATGGTGATGACCCCATCGAAGAGATGTTCGCTAAACACCTGCGAAAGAGACAGAGAGAGACAGAGGGCAGTGAGGTTGAGGGGGAGGGTATCTCAAACCCCCCTAAGGTAACAACTGCAAGAAGGGGACGACCGCCGACCCATGGCAAGTACATCGGCCTGGGTAAGGCGAGAGCCGAAATGCGCGCCGCTCTTGAAGAGTCAGCGCAGCGTAAAGAGGCAGGGAGCAGCTCCGCACCACAGTGGAGGCCTTCCCCAATCCGAAGATCATCACCAAGCGCGCCACCAGCCCCGATTCGTCTGCCGGCCCAGATGTCGGCGCACGAGCTCGGTGAGCCTATAAACAACGAGGCGGCAAAGATCTTGCGGATTGGCCTGAAGAGTAAGAACCTCAAGGGCACTTACGTAAGAGACCTCAAGGACTCCAGTGCCGCGATAATGGACGCGGCCAGCAGCCTTTTAGACCGCACCGCCAACTTCGAGACGGCGAAGCTGCAGTCTGAGAATCAGACGCTCAGGGCGGAGATCATAGCCCTTAAAACACAGGTTGAGCAAATGAGGCGCGAGATCGTGCAGAACAGGGTGGCTGCTATTGCCCCCCCGATGCCGGTCGCGCCACCGCCACAAACACTAGGGATGACAGACGAGTTGCGCTCGGTTCTGAGCAGAGTGGAGACTCGCTTAGACCACATCGAGACGCGGCTCCAGAAAGAGCGCACCAGGCCGCCCCTTCGTGGTGACCTGACTAACGCCAGTGTGCAGCGCGACAACACCAGCGCCACCAACTCTGAGAGGACGACGAGGTCTGGCCCCGCTTCCAAGGCCGGGCGGGCAGTGAGCGAGAAGCCGACGGCTCAAACCCAGCCCGCAGTGGAGGCCAAACAGCCCAAAGCCAGGAAGGCCAGGGGCAAGAGGAAGCCGAGAGCGGGGTGCGCGGGGGCTAGCGACCTGCTCCACGAATGGCTCCAGTATCAACCCAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGATCAACCGAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGGTCCTTCTAGAGATATCAAACCATTTCCAGTACACGTGAATGAAGATCAACCGAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGGTCCTTCTAGAGATATCAAACCATTTCAAGTAGACGATGAAGATTTCATCGACTTGGACTGTGATGTTCCATCAGGACCAATGTTAACTAAAATAGAAGAAGAAATAAAATTATTGATAAAGGAAGTTCTCAAAACATTCGACAAAGTTGCCCATAGTTCTGAGCTGAAGAACTTATTAGCATCGCAGAAACGCAAAAATGATATTTTGGAATGTGTGGACCTTACAATAGATACTTCAGAGAACGAAGATATTCTTAGTGATCATGAAAATTTACAAAATGAACGTGATAATAGCTTACAAAATAACACAGGTGTAGAAAAAAATACACAAGCTCAGGACAATCACCTTTCCCAGGCGCTCTTTATATCGGAAGAGCCAAACTCTGATACGGAGAATGTGGTTGTTAACGTTGAGAAAACATCGGCTAAAAGCGATATAAGATCAAGCACGGTTAAAGTACAAGATTCTTATTCGCAGACTACTGAAACAATGATAACACCGGAATGCAAGTCAGGTACTAGACGTAGAAGGTTAAGATCGGATAATATGGGTCGGACGGATGTTCCATGTGCGAAGAAGTCATCCAATAGGGTAAGTATTAAGCGGCGAAAATCAAAGCTGGGAAATATGGATAGGATTGAAATCCAGATAGAGGTACAAAGTGCAAACAAAACGGTTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGATGACGAAATATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTGAAAGAAAATATATTAAGCGTAAAAAGACAGTGACGACTATCAATGAAAGGGATCAGATTGAAGACGTGGAAAGTCCAACCATAACGGCTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGTTGACGAAGTATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTAGAAGACAATGTATTAAGCGTAAAAAGTCAAAGACGACTATCAATGAAGGGGATCAGATTGAAGACGTGGAAAGTCAAACTACAACGGCTACTAAACCAAATACTAGTCCTGACAGGTTTCGTACTCTAAGCAGTGATGACGAAGTATTAGCGAAAAAGAAAAGGGATATTACGGTCTTACAGGAGGCGCCAGTTTTCAAGCCAACTAAAAAAGAATTTGAAGATCCAATAAAGTATTTTGAAAGTATAATGCCAAAGGCATCAAAATATGGGATTTGTAAAGTAATACCACCAGTTGCATTCAAACCCTCTTGCCATCTCAATGTAATGATGCCATTTGGAGTAACAAACCAGTACATAGCTAGAATGTTCCGGCGCTGGGGTCCATCCACTAGTATACTTGCTGCAATTATAGCGGCCCAAAGAGAGACTTTTAAAAGACCACCATTGCTTGGCAGCATCGAAGTTGATCTTCCTAAGCTTTTTAATACAGTGATCAGTATGGGAGGCCTTTCAAGTGGCTTCACTCACCAAAAATGGACTAAAGTAGCTGAAATGCTTAAATACAATCATGTTAAAAGGCCCGGTTCAAGACTCGAGGCCATCTATGTTAAATATCTGCTTGCATATGAAATATTGACTCTTACCGAACGGAAGCTACTGATAGAAGAAGTGAGAGAGCATTGGACCAAAAGAGAGAAATTAATGCTGAAAAGGTCCTCTGATCCGGACTACAACAGGAAAGTGATACTCGGCGAGTTACACGGGTCAACCGAGCCTAAAAATACTGGCGGTTTTGAAACAAATAAAGAGATGAACATATTCAACTTTCTCGCAGAAACCGAGGATTGTGTGGCCAAAGGCCGAAAAGCTAATTTGACATCATTCAAGAAAATGGCTCAGTATGCGTCAAACATACTATTGGCGTCTCGCGGTATGGACACTGATAGCATCGAGAAGGCCTATTGGGATCTGATTAAGTCGGGCACTGAGCATGTTTGCGTGAACGCCGCATCAATCGACACTGCCACTAGTAACGACGGTTTTCCAGAAAATGAAGTGAACAACCAATATCCTTGGAACTTGAAAAGATTGAGTGAGTGCACTCAAAATATGCTGAGTTTTTTGGGCCCAGTTTTGGGCATGACGGTGCCCACTTTGCACCTGTCTATGGTGTTTTCTACGAGTTGCTGGCACCGAGACCCACACGGTCTGCCGTGGATAGAGTACATGCACGAGGGAGCCGATAGGGTGTGGTATGGCGTAAGTGACGAACAAGATGAAACTTTCCGAAAGGCAGTCGAAACGCTGTGCCCATTATATTTCCAGAAAAAGTCAGTTTGGATGCAGTCGGATATGACTATGATACCACTGAATCTCCTTAAACAGTACAAAGTCTCCTTGTGCCGAACGGTACAGAAGCCTGGCGAGTTTATATTAGTCTGCCCGAAAGCATATTCCTCTTCAGTTGCAACAGGATATTCTGTGTCGGAAAGTGTCTACTTTGCCACCTTAGCGTGGATTCAAAATATAGACCAGGTCTTCCAGTATAATGCACCCGTGTGA
Protein Sequence
MPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEAHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDHPNTSSYAAMPSHNPVEDSSIEAAPGSSFYKEDPVMRSSRGPFHMAQWRFMRVVWLAFKAGEVRRIDGGPLTLRFRCPAIGKTTPGGSNPAGRSEEPPQKPHRTLGGGGKLHKDDVGVSKEGDNIAEDLSMDARVVLERLPCIPVIQHWAKDDSRKVTEPTIDSDDLSDGDDPIEEMFAKHLRKRQRETEGSEVEGEGISNPPKVTTARRGRPPTHGKYIGLGKARAEMRAALEESAQRKEAGSSSAPQWRPSPIRRSSPSAPPAPIRLPAQMSAHELGEPINNEAAKILRIGLKSKNLKGTYVRDLKDSSAAIMDAASSLLDRTANFETAKLQSENQTLRAEIIALKTQVEQMRREIVQNRVAAIAPPMPVAPPPQTLGMTDELRSVLSRVETRLDHIETRLQKERTRPPLRGDLTNASVQRDNTSATNSERTTRSGPASKAGRAVSEKPTAQTQPAVEAKQPKARKARGKRKPRAGCAGASDLLHEWLQYQPSTSTYSGPSLEPIPDQPSTSTYSGPSLEPIPGPSRDIKPFPVHVNEDQPSTSTYSGPSLEPIPGPSRDIKPFQVDDEDFIDLDCDVPSGPMLTKIEEEIKLLIKEVLKTFDKVAHSSELKNLLASQKRKNDILECVDLTIDTSENEDILSDHENLQNERDNSLQNNTGVEKNTQAQDNHLSQALFISEEPNSDTENVVVNVEKTSAKSDIRSSTVKVQDSYSQTTETMITPECKSGTRRRRLRSDNMGRTDVPCAKKSSNRVSIKRRKSKLGNMDRIEIQIEVQSANKTVNNPSTSHQMLRSLTSSDDEILATTPARKSGTRRRRNASERKYIKRKKTVTTINERDQIEDVESPTITANNPSTSHQMLRSLTSSVDEVLATTPARKSGTRRRRNASRRQCIKRKKSKTTINEGDQIEDVESQTTTATKPNTSPDRFRTLSSDDEVLAKKKRDITVLQEAPVFKPTKKEFEDPIKYFESIMPKASKYGICKVIPPVAFKPSCHLNVMMPFGVTNQYIARMFRRWGPSTSILAAIIAAQRETFKRPPLLGSIEVDLPKLFNTVISMGGLSSGFTHQKWTKVAEMLKYNHVKRPGSRLEAIYVKYLLAYEILTLTERKLLIEEVREHWTKREKLMLKRSSDPDYNRKVILGELHGSTEPKNTGGFETNKEMNIFNFLAETEDCVAKGRKANLTSFKKMAQYASNILLASRGMDTDSIEKAYWDLIKSGTEHVCVNAASIDTATSNDGFPENEVNNQYPWNLKRLSECTQNMLSFLGPVLGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGADRVWYGVSDEQDETFRKAVETLCPLYFQKKSVWMQSDMTMIPLNLLKQYKVSLCRTVQKPGEFILVCPKAYSSSVATGYSVSESVYFATLAWIQNIDQVFQYNAPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-