Acar008463.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Jarid2
- Assembly
- GCA_905404175.1
- Location
- FR989951.1:14160750-14192784[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-15 8.4e-12 45.7 0.0 9 89 712 789 709 789 0.87
Sequence Information
- Coding Sequence
- ATGTCACTCACACAAAGAATTAAGACGCATGAGGCGACTGCGGGGAAAAGAGAAGGCGCGCGGGGCGATTCCTCCGCCGCGCGTCACTTCCACGTCCCTCTGTCACCTTATTATAGCGTTCTGCGCATCGAAACGTACGATGTTCACAGCCGCCAATTAATATGGAAAAGACCTACACCAAAAGTGTCGAAAAAAATAAAAGAAAGAGATAAGAACAGAAGAGATGCAAAGAAGGCATCAGCGGATACAGGGGAGATAGAAAAGCGCCGAAACCATCATCCAAATACTTCAAGCTATGCAGCTATGTCATCGCATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGTCATCGCATAATCCTGTCGAAGATCATCCAAATATTTCAAGCTATGCCACCATAGGACCATCTCATAATCCTGTCGAAGATCATCCAAATATTTCAAGCTATGCCACCATAGGACCATCTCATAATCCTGTCGAAGATCATCCAAATACTTCAAGCTATGCAGCTATGTCATCGCATAATCCTGTCGAAGATCAACCGAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGATCAACCGAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGGTCCTTCTAGAGATATCAAACCATTTCAAGTACACGTGAATGAAGATCAACCGAGTACTTCAACTTATTCAGGACCATCTCTGGAACCTATTCCAGGTCCTTCTAGAGATATCAAACCATTTCAAGTAGACGATGAAGATTTCATCGACTTGGACTGTGATGTTCCATCAGGACCAATGTTAACTAAAATAGAAGAAGAAATAAAATTATTGATAAAGGAAGTTCTCAAAGCATTCGACAAAATTGCCCATAGTCCTGAGCTGAAGTACTTATTAGCATCGCAGAAACGCAAAAATGATATTTTGGAATGTGTGGACCTTACAATAGATACTTCAGAGAACGAAGATATTAGTGATCATGAAAATTTACAAAATGAACGTGATAATAGCTTACAAAATAACACAGGTGTAGAAAAAAATACACAAGCTCAGGACAATCACCTTTCCCAGGCTCTCTTTATATCGGAAGAGCCAAACTCTGATACAGAGAATGTGGTTGTTAACGTTGAGAAAACATCGGCTAAAAGCGATATAAGATCAAGCACGGTTAAAGTACAAGATTCTTATTCGCAGACTACTGAAACAATGATAACACCGGAATGCAAGTCAGGTACAAGACGTAGAAGGTTAAGATCGGATAATATGGGTCGGACGGATAGTGAAATGGAAGTTCCATGTGCGAAGAAGTCATCCAATAGGGTAAGTATTAAGCGGCGAAAATCAAAGCTGGGAAATATGGATAGGATTGAAATCCAGATAGATGTACAAAGTGCAACCAAAAAGGTTAACAACCCAAGTACTAGCTATCAAATGTTACGGTCATTGACAAGTAGTGATGACGAAGTATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTGTAAGACAATATATTAAGCGTAAAAAGACAGTGACGACTATCAATGAAAGGGATCAGATTGAAGACGTGGAAAGTCCAACCATAACGGCTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGTTGACGAAGTATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTAGAAGACAATGTATTAAGCGTAAAAAGTCAAAGACGACTATCAATGAAGGGGATCAGATTGAAGACGTGGAAAGTCAAACTACAACGGCTACTAAACCAAATAATACTCTAAGCAGTGATGACGAAGTATTGGCGAAAAAGAAAAGGGATATTACGGTCTTACAGGAGGCGCCAGTTTTCAAGCCAACTAAAAAAGAATTTGAAGATCCAATAAAGTATTTTGAAAGTATAATGCCAAAGGCATCAAAATATGGGATTTGTAAAGTAATACCACCAGTTGCATTCAAACCCTCTTGCCATCTCAATCTAATGATGCCATTTGGAGTAACAAACCAGTACATAGCTAGAATGTTCCGGCGCTGGGGTCCATCCACCAGTACACTTGCTGCAATTATAGCGGCCCAAAGAGAGACTTTTAAAAGACCACCATTGCTTGGCAGCATCGAAGTTGATCTTCCTAAGCTATTTAATACAGTGATCAGTATGGGAGGCCTTTCAAGTGGCTTCACTCACCAAAAATGGACTAAAGTAGCTGAAATGCTTAAATACAATCATGTTAAAAGGCCCGGTTCAAGACTCGAGGCCATCTATGTTAAATATCTGCTTGCATATGAAATATTGACTCTTACCGAACGGAAGGTACTGATAGAAGAAGTGAGAGAGCATTGGACCAAAAGAGAGAAATTAATGCTGAAAAGGTCCTCTGATCCGGACTACAACAGGAAAGTGATACTCGGCGAGTTACACGGGTCAACCGAGCTTAAAAATACTGGCGGTTTTGAAACAAATAAAGAGATGAACATATTCAACTTTCTCGCAGAAACCGAGGATTGTGTGGCCAAAGGCCGAAAAGCTAATTTGACATCATTCAAGAAAATGGCTCAGTATGCGTCAAATATACTATTGGCGTCTCGCGGTATGGACACTGATAGCATCGAGAAGGCCTATTGGGATCTGATTAAGTCGGGCGCTGAGCATGTTTGCGTGAACGCCGCATCAATCGACACTGCCACTAGTAACGACGGTTTTCCAGGAAATGAAGTGAACAACCAATATCCTTGGAACTTGAAAAGATTGAGTGAGAGCACTCAAAATATGCTGAGTTTTTTGGGCCCAGTTTTGGGCATGACGGTGCCCACTTTGCACCTGTCTATGGTGTTTTCTACGAGTTGCTGGCACCGAGACCCACACGGTCTGCCGTGGATAGAGTACATGCACGAGGGAGCCGATAGGGTGTGGTATGGCGTAAGTGACGAACAAGATGAAACTTTCCGAAAGGCAGTCGAAACGCTGTGCCCATTATATTTCCAGAAAAAGTCAGTTTGGATGCAGTCGGATATGACTATGATACCACTGAGTCTCCTTAAACAGTACAAAGTCTCCTTGTGCCGAACGGTACAGAAGCCTGGCGAGTTTATATTAGTCTGCCCGAAAGCATATTCCTCTTCAGTTGCAACAGGATATTCTGTGTCGGAAAGTGTCTACTTTGCCACCTTAGCGTGGATTCAAAATATAGGCCAGGTCTTCCAGGAAGGAGTGATGACGTCATGCTTCATGATGTTCAGAAGTAGGTGTTCTTCTGCGGGGTCATCAATGTGGAGGAAGGGAGGTTTGCTCTTCCTCCAACCTAAAGGGAGGATCCTCGACCAGTCGAACCACTGA
- Protein Sequence
- MSLTQRIKTHEATAGKREGARGDSSAARHFHVPLSPYYSVLRIETYDVHSRQLIWKRPTPKVSKKIKERDKNRRDAKKASADTGEIEKRRNHHPNTSSYAAMSSHPVEDHPNTSSYAAMSSHNPVEDHPNISSYATIGPSHNPVEDHPNISSYATIGPSHNPVEDHPNTSSYAAMSSHNPVEDQPSTSTYSGPSLEPIPDQPSTSTYSGPSLEPIPGPSRDIKPFQVHVNEDQPSTSTYSGPSLEPIPGPSRDIKPFQVDDEDFIDLDCDVPSGPMLTKIEEEIKLLIKEVLKAFDKIAHSPELKYLLASQKRKNDILECVDLTIDTSENEDISDHENLQNERDNSLQNNTGVEKNTQAQDNHLSQALFISEEPNSDTENVVVNVEKTSAKSDIRSSTVKVQDSYSQTTETMITPECKSGTRRRRLRSDNMGRTDSEMEVPCAKKSSNRVSIKRRKSKLGNMDRIEIQIDVQSATKKVNNPSTSYQMLRSLTSSDDEVLATTPARKSGTRRRRNASVRQYIKRKKTVTTINERDQIEDVESPTITANNPSTSHQMLRSLTSSVDEVLATTPARKSGTRRRRNASRRQCIKRKKSKTTINEGDQIEDVESQTTTATKPNNTLSSDDEVLAKKKRDITVLQEAPVFKPTKKEFEDPIKYFESIMPKASKYGICKVIPPVAFKPSCHLNLMMPFGVTNQYIARMFRRWGPSTSTLAAIIAAQRETFKRPPLLGSIEVDLPKLFNTVISMGGLSSGFTHQKWTKVAEMLKYNHVKRPGSRLEAIYVKYLLAYEILTLTERKVLIEEVREHWTKREKLMLKRSSDPDYNRKVILGELHGSTELKNTGGFETNKEMNIFNFLAETEDCVAKGRKANLTSFKKMAQYASNILLASRGMDTDSIEKAYWDLIKSGAEHVCVNAASIDTATSNDGFPGNEVNNQYPWNLKRLSESTQNMLSFLGPVLGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGADRVWYGVSDEQDETFRKAVETLCPLYFQKKSVWMQSDMTMIPLSLLKQYKVSLCRTVQKPGEFILVCPKAYSSSVATGYSVSESVYFATLAWIQNIGQVFQEGVMTSCFMMFRSRCSSAGSSMWRKGGLLFLQPKGRILDQSNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -