Acar010268.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Jarid2
- Assembly
- GCA_905404175.1
- Location
- CAJQEZ010000001.1:252055-259493[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8e-15 5.5e-12 46.3 0.0 14 89 29 101 21 101 0.87 2 3 6.7 9.7e+03 -2.6 0.0 3 48 109 158 107 171 0.58 3 3 9.1 1.3e+04 -3.0 0.0 36 65 358 387 346 407 0.69
Sequence Information
- Coding Sequence
- ATGCCATTTGGAGTAACAAACCAGTACATAGCTAGAATGTTCCGGCGCTGGGGTCCATCCACTAGTATACTTGCTGCAATTATAGCGGCCCAAAGAGAGACTTTTAAAAGACCACCATTGCTTGGCAGCATCGAAGTTGATCTTCCTAAGCTTTTTAATACAGTGATCAGTATGGGAGGCCTTTCAAGTGGCTTCACTCACCAAAAATGGACTAAAGTAGCTGAAATGCTTAAATACAATCATGTTAAAAGGCCCGGTTCAAGACTCGAGGCCATCTATGTTAAATATCTGCTTGCATATGAAATATTGACTCTTACCGAACGGAAGCTACTGATAGAAGAAGTGAGAGAGCATTGGACCAAAAGAGAGAAATTAATGCTGAAAAGGTCCTCTGATCCGGACTACAACAGGAAAGTGATACTCGGCGAGTTACACGGGTCAACCGAGCCTAAAAATACTGGCGGTTTTGAAACAAATAAAGAGATGAACATATTCAACTTTCTCGCAGAAACCGAGGATTGTGTGGCCAAAGGCCGAAAAGCTAATTTGACATCATTCAAGAAAATGGCTCAGTATGCGTCAAACATACTATTGGCGTCTCGCGGTATGGACACTGATAGCATCGAGAAGGCCTATTGGGATCTGATTAAGTCGGGCACTGAGCATGTTTGCGTGAACGCCGCATCAATCGACACTGCCACTAGTAACGACGGTTTTCCAGAAAATGAAGTGAACAACCAATATCCTTGGAACTTGAAAAGATTGAGTGAGTGCACTCAAAATATGCTGAGTTTTTTGGGCCCAGTTTTGGGCATGACGGTGCCCACTTTGCACCTGTCTATGGTGTTTTCTACGAGTTGCTGGCACCGAGACCCACACGGTCTGCCGTGGATAGAGTACATGCACGAGGGAGCCGATAGGGTGTGGTATGGCGTAAGTGACGAACAAGATGAAACTTTCCGAAAGGCAGTCGAAACGCTGTGCCCATTATATTTCCAGAAAAAGTCAGTTTGGATGCAGTCGGATATGACTATGATACCACTGAATCTCCTTAAACAGTACAAAGTCTCCTTGTGCCGAACGGTACAGAAGCCTGGCGAGTTTATATTAGTCTGCCCGAAAGCATATTCCTCTTCAGTTGCAACAGGATATTCTGTGTCGGAAAGTGTCTACTTTGCCACCTTAGCGTGGATTCAAAATATAGACCAGGTCTTCCAGGCTCTCTGGAGAAGACCCAGACACGTTTTAGAGGATCCTGACGATCCTATCACAGTAGCCAATGCTAGATTAGACTCCGCCCGGGCGGACATTTCTCCTCAGACCCGCGTACAGCGCCTTCGACGGCGAAGGCGAGGACCCTTGTTCCGCGCATCCCTCACACGGCGTTCCGATCTTGACTGCCGCGACTCGGCAGTCGCTGCCGTCGGCTGCAAGCACTACCAACTGCTCAGCAGCGCGACCACGTTCATTCCGATCGTAACTGCCAGGCAGTATAACGGCGAGAAATACCGCCATTTTTATTTTAGAGCACGTGCAATAATAGAGGGTCGCGCTGCCAGACTGCTTCACAAGCGGCTGGGCAGCGCTGCCACTCGTGCGCAGCTTGGCCGCACGACCCGGTCGCGTGCATCGGAAAGCTCTCTATGCATGATCATACAGAGCGGTGCGTTGCTGCCCGGCAATGACTGCTGGGTCGCAGCTGCCGAGTCGCGGCAGTCAAGATCGGAACGCTACCTTTATGTACGGAATCACAAGCTATGA
- Protein Sequence
- MPFGVTNQYIARMFRRWGPSTSILAAIIAAQRETFKRPPLLGSIEVDLPKLFNTVISMGGLSSGFTHQKWTKVAEMLKYNHVKRPGSRLEAIYVKYLLAYEILTLTERKLLIEEVREHWTKREKLMLKRSSDPDYNRKVILGELHGSTEPKNTGGFETNKEMNIFNFLAETEDCVAKGRKANLTSFKKMAQYASNILLASRGMDTDSIEKAYWDLIKSGTEHVCVNAASIDTATSNDGFPENEVNNQYPWNLKRLSECTQNMLSFLGPVLGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGADRVWYGVSDEQDETFRKAVETLCPLYFQKKSVWMQSDMTMIPLNLLKQYKVSLCRTVQKPGEFILVCPKAYSSSVATGYSVSESVYFATLAWIQNIDQVFQALWRRPRHVLEDPDDPITVANARLDSARADISPQTRVQRLRRRRRGPLFRASLTRRSDLDCRDSAVAAVGCKHYQLLSSATTFIPIVTARQYNGEKYRHFYFRARAIIEGRAARLLHKRLGSAATRAQLGRTTRSRASESSLCMIIQSGALLPGNDCWVAAAESRQSRSERYLYVRNHKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114716;
- 90% Identity
- iTF_00114716;
- 80% Identity
- -