Acar020595.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- xbp-1
- Assembly
- GCA_905404175.1
- Location
- FR989954.1:11466861-11468991[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-17 3.3e-14 53.0 5.7 2 52 44 94 44 95 0.97 2 3 3.5e-06 0.0037 17.6 2.3 28 55 84 111 83 116 0.90 3 3 5.2 5.5e+03 -2.2 0.0 20 39 137 156 133 162 0.78
Sequence Information
- Coding Sequence
- ATGAGCGCACCGATCATTATCACCGTGCCTAAGTACTTGAAGATTGAGGATGGAGATTCGCAGATGGTGATGGTGGATGTGGCCCCATCCACCCCGTCCAGAAAACGAAGACTCGACCACCTCACGTGGGAGGAGAAAATGCAAAGAAAGAAACTGAAGAACCGTGTTGCGGCACAAACGTCGCGAGATCGCAAGAAGGCAAAAATGGACGAAATGGAAAGCAAAATCGACCACTTCATGGCGATCAATGAGCGTCTTGTTAAAGAGGTTGAAGATTTAAAAGCAATGAACGAGCGACTACTCAGCGAGAACGCATCGCTTCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGAGGCCCCAAGACCAGCAGCGTCACCTCAGCAGAAGGAGGGGCCCCCGTCGGCGATCCGCGCGGCTCGCCTGCTGCTGACGATGTGTCTCCTCTCGCAGACATCCTCGCTCACCTCGAGTCAGACGAATACCTTGACACATTGCACCAACTTGCAGACTCCCTCCTCAAGGAAATTGATGCAAGTGCTGCAAGAACGGTTGAAGATGACTCAAACAGGGAAAATGGAAAATGTTCTGAAGGACCTCAAGTGGTGGGGACCGCAGCAAAGCAACTGGAATCCAGTAAAAATGGTATCTTAG
- Protein Sequence
- MSAPIIITVPKYLKIEDGDSQMVMVDVAPSTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKIDHFMAINERLVKEVEDLKAMNERLLSENASLRSEAAARTVAEAPRPAASPQQKEGPPSAIRAARLLLTMCLLSQTSSLTSSQTNTLTHCTNLQTPSSRKLMQVLQERLKMTQTGKMENVLKDLKWWGPQQSNWNPVKMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205443;
- 90% Identity
- -
- 80% Identity
- -