Basic Information

Gene Symbol
GATA-B
Assembly
None
Location
AY:30843-89901[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.5e-18 1.8e-14 52.8 3.9 1 34 299 331 299 333 0.97
2 2 1.3e-18 2.6e-15 55.4 8.4 1 35 368 401 368 402 0.97

Sequence Information

Coding Sequence
ATGTTGTCTGCGCGGCGGAGCCCCACTCCGGGCGCGCGGCTCACCGTGCGCTGTGTGTGTGCAGAGGGCGAGGCGGAGTGCGGCGCGGGCGAGGTCGACGCGGAGAGCCCGCCCCCCCTCGCGTACGGGTACGCCCCCGGCGGCGGCGGGGGCGGAGGGGGCGGCGTGTCGCCGGCGGGCGCGCGCTGCTACCAGGAGCTGCGTCCGGCTGCGGGCGCGGCACACGCGCGCGACATGCAGGCGTACGCGCACCTCGAGGAGCCGCTGTTCAAGGGGGCTCCGGCGAGCGGCTCGACGGACGGGGCGTACCTGCGCGGCCGCAGCCCCGACCTCACGCCGTCGCCGGAGCGCCGCGAGGAGTACCGGCACGGGCTGCACTACGACCAGTACGCGCAGCCGCCGGCGTACTCGCACGAACACCACCACCACCTCGACGGGAGCAGCGCGGGGGGTGCGGGCGGCGGCGTCTACGCTCGCTGCACTTACTCCGGGTCGACGGCATACTTTGGCGGCGGCGGCGAGCTCTCCACGCAGCCGCAGATATGGACTTCGAGTGCAGGAGAGTCACCCAGTTACGGCGGTTCTGGCGGCGCTGCGGGCCTCGTACTCACGGAGGAATACCCGGAGAGTGGTGCCGAGGGCGCCGGCGGGAGTGGCGGGGGCGCGGAGGGGGTCGGCGGGGGGTCGCTGCCCGCGTTCAGCGCGCGGTTCGGCGGTGCGTTCGCGTGCGCCACCTCGCGCCCCTCCACCGTGTACGGGTCTTCAGCGCTGGCCGCCAACGCGTACTCGCACCAGGACGCGTGGAGTCTGGAGAACAACCGCCGACCGCAGCTGTCCGCCGCCGCTAGTCTCTCCGCCATCGAGATGGCGGAGTTTTTCACTGAGGGGCGGGAGTGCGTGAACTGCGGGGCGATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACGCCGCGCACGCGCTCGCCGCGCCGCCCCACGACATGGGCACGAAGCGGCCGGGCATGTCGTGCACGAACTGCCACACGACGACGACGTCGCTGTGGCGGCGCAACACGAACGGGGAGACGGTGTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACGTGAACCGACCGCTCACCATGAAGAAAGACTCCATACAGACGAGAAAGAGGAAACCTAAGAATAGTATAAAGGCTGAACGGAATCTCAAGACCGCGGCGCAGCGCACCGTCCCCTCGGGGGTCAAGATCGAGAGCCTGCGTGAGTTCACTATACCGTTGGAGGTGCCGGGCGGCGCGCGGGCGGCGCTGCCCCTCGGCTACTACATGCAGCACTCGATGAAGGCGGAGGAGCCGCCGCCGGCGCACCTCGCGCACGGGGGGCACGCGCTCTACGAGGAGGGGGAGTACCGGCGCGCGGCGCAGGAGGGGGGGGAGCGGCCCACGGTGGTGTCGCTGGGGGGGAGCTGA
Protein Sequence
MLSARRSPTPGARLTVRCVCAEGEAECGAGEVDAESPPPLAYGYAPGGGGGGGGGVSPAGARCYQELRPAAGAAHARDMQAYAHLEEPLFKGAPASGSTDGAYLRGRSPDLTPSPERREEYRHGLHYDQYAQPPAYSHEHHHHLDGSSAGGAGGGVYARCTYSGSTAYFGGGGELSTQPQIWTSSAGESPSYGGSGGAAGLVLTEEYPESGAEGAGGSGGGAEGVGGGSLPAFSARFGGAFACATSRPSTVYGSSALAANAYSHQDAWSLENNRRPQLSAAASLSAIEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAAPPHDMGTKRPGMSCTNCHTTTTSLWRRNTNGETVCNACGLYFKLHNVNRPLTMKKDSIQTRKRKPKNSIKAERNLKTAAQRTVPSGVKIESLREFTIPLEVPGGARAALPLGYYMQHSMKAEEPPPAHLAHGGHALYEEGEYRRAAQEGGERPTVVSLGGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00113817;
90% Identity
iTF_00113817;
80% Identity
-