Ayam007889.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:141917-143920[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.6 2.6e+02 2.1 0.1 2 23 30 52 29 52 0.90 2 13 0.011 0.52 10.6 0.1 3 23 77 97 76 97 0.97 3 13 0.00067 0.032 14.4 1.2 1 21 101 121 101 122 0.96 4 13 0.012 0.57 10.5 0.4 1 23 163 186 163 186 0.96 5 13 0.011 0.52 10.6 0.1 3 23 246 266 245 266 0.97 6 13 0.00067 0.032 14.4 1.2 1 21 270 290 270 291 0.96 7 13 0.012 0.57 10.5 0.4 1 23 332 355 332 355 0.96 8 13 0.0019 0.091 13.0 0.8 2 23 494 515 493 515 0.95 9 13 0.0001 0.0049 17.0 0.0 1 23 519 542 519 542 0.97 10 13 0.015 0.7 10.2 0.5 1 23 546 569 546 569 0.98 11 13 1.9 91 3.5 0.3 1 23 574 599 574 599 0.87 12 13 0.0014 0.067 13.4 2.7 1 23 608 631 608 631 0.97 13 13 0.00055 0.026 14.7 0.4 1 23 641 664 641 664 0.95
Sequence Information
- Coding Sequence
- ATGAAGGGAGAACATCTCAATTCGGATTTTGGGAACGTGTTCTATAGAATCAAGGATAATTTGATAAAAATTGATATAACTGGTTTGAAGTGTAAACTATGCTCGGCTGATATACAAGATGTAGATCTATTGATGAACCATTTATATCGGGAACACGATAAGCCAGTAAAATTTAATGCGAGATACGGCGTATTACCTTATAAGCAGAATGTAGACGGTAAATGGCTCTGCGTCTATTGCCCTAAAGTTTTCGCAGAATTTGTACCTTTCAAGCGACACATAGGTACGCATTTCATGAGTTTTACTTGCGAGAAATGCGGAACGATGTTCGTGTCGGATCACGCACTCAGGGATCACCATCGTCAAGTTAAATGCTTTAGAACCGCATACAAACCGCGAAACGGGAAGGTTATGAAGCCACGGACCAATGCCGAAATTATATTACAATGTTCTACCGCGTGTCCTTTTAGAACTTGGAAGACGAATTTTAACTGCGTCTTCTGTCGGCTACAGACTAGTGACCCTGTCTCCTTAAGATCCCATATGGCTACACGCCATGCTAATTACGATATTCAAGGAGCTTTTTATAAGAAACTTGGCAAGGATTTTTTAAATGTTGACATAACTGATTTGCANTTGATGAACCATTTATATCGGGAACACGATAAGCCAGTAAAATTTAATGCGAGATACGGCGTATTACCTTATAAGCAGAATGTAGACGGTAAATGGCTCTGCGTCTATTGCCCTAAAGTTTTCGCAGAATTTGTGCCTTTCAAGCGACACATAGGTACGCATTTCATGAGTTTTACTTGCGAGAAATGCGGAACGATGTTCGTGTCGGATCACGCACTCAGGGATCACCATCGTCAAGTTAAATGCTTTAGAACCGCATACAAACCGCGAAACGGGAAGGTTATGAAGCCACGGACCAATGCCGAAATTATATTACAATGTTCTACCGCGTGTCCTTTTAGAACTTGGAAGACGAATTTTAACTGCGTCTTCTGTCGGCTACAGACTAGTGACCCTGTCTCCTTAAGATCCCATATGGCTACACGCCATGCTAATTACGATATTCAAGGAGCTTTTTATAAGAAACTTGGCAAGGATTTTTTAAATGTTGACATAACTGATTTGCAATGTAAATTATGCTTCATGCCAGTGGAACAGTTCGATATTTTGACTTATCATTTGAAGAATGATCATCAACAGCCGATTAATTTAGACGCTCAAATAGGTGTATTACCATTTAGGTTAAACGATGGTTCGGTTTGGAAATGCACGANTTTTTATAAGAAACTTGGCAAGGATTTTTTAAATGTTGACATAACTGATTTGCAATGTAAATTATGCTTCATGCCAGTGGAACAGTTCGATATTTTGACTTATCATTTGAAGAATGATCATCAACAGCCGATTAATTTAGACGCTCAAATAGGTGTATTACCATTTAGGTTAAACGATGGTTCGGTTTGGAAATGCACGATCTGCCCAAATGAGTTCAAAGATTTCATGTCACTAAAGAAGCACACATCGGAGCATTTTCAAAATTACGTTTGTGACACATGTGGTGAAGGATTTATAACGGAATCGTCTATGATAGCTCACACAAAAATACCTCATGAGAATAAGTACAGTTGCAGCCGTTGTGTGGCTACTTTCTCTTCGCTAGATGAACGGAATATACATGTGAAAACCCAACATACGTCGATGCCCTACATGTGTGTGTATTGTAAAGAGAAACCACGTTTCGCCAATTGGGAACTGCGGAAGAAGCATCTTATGGAAATACACAATTACAAGACTGGAACGGACAAATACGAGTGCACGGCATGTCAGAAATCATTTAAGACACGATCCGGGAAATATAATCACATGACGAGAACGCACAGGATGAAGAAAGATAGCGAATTAAATTACCCCTGCCCTAGTTGTCCAAAAGCATTTACCACGAAGTTGTTCCTGGACAAACATGTGGCTAAAAAACATTTCGATGTCTGA
- Protein Sequence
- MKGEHLNSDFGNVFYRIKDNLIKIDITGLKCKLCSADIQDVDLLMNHLYREHDKPVKFNARYGVLPYKQNVDGKWLCVYCPKVFAEFVPFKRHIGTHFMSFTCEKCGTMFVSDHALRDHHRQVKCFRTAYKPRNGKVMKPRTNAEIILQCSTACPFRTWKTNFNCVFCRLQTSDPVSLRSHMATRHANYDIQGAFYKKLGKDFLNVDITDLXLMNHLYREHDKPVKFNARYGVLPYKQNVDGKWLCVYCPKVFAEFVPFKRHIGTHFMSFTCEKCGTMFVSDHALRDHHRQVKCFRTAYKPRNGKVMKPRTNAEIILQCSTACPFRTWKTNFNCVFCRLQTSDPVSLRSHMATRHANYDIQGAFYKKLGKDFLNVDITDLQCKLCFMPVEQFDILTYHLKNDHQQPINLDAQIGVLPFRLNDGSVWKCTXFYKKLGKDFLNVDITDLQCKLCFMPVEQFDILTYHLKNDHQQPINLDAQIGVLPFRLNDGSVWKCTICPNEFKDFMSLKKHTSEHFQNYVCDTCGEGFITESSMIAHTKIPHENKYSCSRCVATFSSLDERNIHVKTQHTSMPYMCVYCKEKPRFANWELRKKHLMEIHNYKTGTDKYECTACQKSFKTRSGKYNHMTRTHRMKKDSELNYPCPSCPKAFTTKLFLDKHVAKKHFDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -