Ayam002572.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:15105-32423[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.043 2 8.8 0.1 3 23 118 138 116 138 0.96 2 19 0.22 10 6.5 0.1 2 23 142 164 141 164 0.94 3 19 9.9 4.7e+02 1.3 3.4 2 23 215 237 214 238 0.91 4 19 0.09 4.2 7.7 0.1 1 20 439 458 439 460 0.94 5 19 4.5 2.1e+02 2.4 0.4 3 15 471 483 470 491 0.75 6 19 1.8 86 3.6 0.4 1 22 507 528 507 530 0.73 7 19 0.075 3.5 8.0 4.2 1 23 539 562 539 562 0.96 8 19 4 1.9e+02 2.6 0.3 8 23 613 629 610 629 0.89 9 19 0.031 1.5 9.2 0.1 3 23 641 662 639 662 0.95 10 19 0.33 15 6.0 0.6 1 23 667 690 667 690 0.95 11 19 9.2e-05 0.0044 17.1 1.4 1 23 696 718 696 718 0.95 12 19 1.1e-05 0.00052 20.0 1.8 1 23 725 747 725 747 0.98 13 19 8.4e-05 0.004 17.3 2.3 1 23 752 774 752 774 0.96 14 19 0.00025 0.012 15.8 1.1 1 23 780 802 780 802 0.98 15 19 2e-06 9.5e-05 22.4 1.5 1 23 808 830 808 830 0.98 16 19 0.00048 0.023 14.9 2.8 2 23 837 858 837 858 0.98 17 19 0.00083 0.039 14.1 0.7 2 23 866 888 865 888 0.97 18 19 8.1e-05 0.0038 17.3 0.4 1 23 893 915 893 915 0.98 19 19 0.00015 0.0072 16.4 1.2 1 23 921 944 921 944 0.98
Sequence Information
- Coding Sequence
- ATGACTTCAGATGAATCAGACGATGAACCGCTATCGGTTTTAGCGGCACAGAAGAAACAGAATCCGGAAATGTTTCCGGATATAATATTACCAAGTGAAATTGTTTTAGAACCTAAAAAGAAGAAGAAAAAGAAATTTACTCCATCGACAGGTGCAGCACTCACAATTAAGATACAAAAGAAGTTTAGAAACGTACTTGCGCCGGCTGTGATCGAGCGTCCGGCAGATGTCTGGTTGTATCTGAAAGATCTGAACCCAAATGGTCCGTACAGCTGTCTGCTCTGCCCAGATTGGTTCATAAACCGATCAAAGATCATCGTGCACTATGTATTAAACCATAAGAAAGATTTTTGTGGTATTTGTAGGTATTTCGTATCAGATAGAGGAGCATGGTGGGCGCACATGCGATTCCATACGCCATGGCCTTGTTCACAATGCATTGAAAACTTTGTAACAGAGAATGCTTTACGACAACACCTCAGTAGTGTTCATAATCTTGTACACTGTCGTCTCTGTCATTTCCGAGTGTCGGATGATGACCAGTACAATACCCATTTATACAAAAAGCATAATGTCTCTAACGTGTCTAGCAAGTATGATGAGGCTTTTTGGGAACTTGAATACGAGGGCTGTGCAAAATTCTTATGTTTATTATGTTCAAAATCGAGTAATATGTCTCGCATGTTCTTCAATCACTATATGGGTTTTCATCATTTCACTTTGAAATGCTTTACTAACTTGATTTCTGGGACCGACCCACCATTTCTGGTATATGGTGCAGATGTCAGTTCTGAATTTGTAGAAAGTCAACTAAAAGTACAAGCGAGGCACGGATATTTAGATCTAGAAAAAGCACCTGACTGTAGAGAAACCGTTCAACAAGTTCAGATAGAAAGAGGAACAATCATTGAAGTCAAAGAGGAGGTGTTTAGTGAAGATGAAGAAGCCCGATACAATGCTCACATTGGCACTGTGAAAAGTAATGAACTAGAAAAATATGAAAATGATAACACAAATATTGAAAATGAAAATGAAGAAGATGAGATCATAAAATCATACAAAGGAGATGAAGATTTTGATGTGACATTAATGGAAATAATTATATTTCATAAAGGTTACCTTGAGTATGTTAACAATATAATGGATGATATAAATTCTAGTTTGATGCCGAAAAATTCTTACGTCGATTATGAAAAATACCCAGTAGATGTAGTAACTGATATTTATTGTTCTTTATGTAAAAGTAAACATGGTACAACCAATGAATATTCTCATCATATGACAAAGATGCATTTTGTGAAATGCATACCCAGTTTTTCCTGTAGAGTGTGCTCCCTGACCTTCGATTCACTAAATGAGCTCGATAGTCATATTTCACAAGAATTAAGTGATTTTGATGACCTCTGGTTATGCCAGTTCTGTGATAAAGAGTTCATGAACCGTGAAGTATCAAGGCTGCACCTCTCAGAACATTGGGATCTTATAGAATATGATAACTGTTTTAGTCCACATTTGGGTTTTAAATGCAAGTATTGCCCTACATTGTTTTGGAATGAGCCGGATAGAGAATCACATCAAGTTAGAATACACTTTAATAAATATAAAGATGAGTATTACAAATGTGAGAGTTGTGATGAATTTTACAGTGATAAGATGTGGTTTGTACATCACCATGTGACCAAACATCAGAATAGTGATGAAAATCTGCCGTTATATCTTCTAAAGTGCTGTTTATGTTTCTTTGTGTTGTCTAATGTAGAAGAAATGAGGAGTCATTTTCAAAATAGTCATCCGGAAGCGAAAAAAGTATATTGTTCATTGGATCCATGCAAGTATAAACCCCTTAGTCAACGGAAGTCATTCAAGATTCATCTTAAGACAATTCACAATCCGTCAGCTAGAGCGGCCCAACTCGTAAACTGTACGATATGTAGCCGTGAGTTTGCAAACATGAGAGCTATAAGCGCTCATATGTCCAAAGTGCATGGACCTGGCAAGTTTAAGTGCAAGTTATGCAAAGAAGCTCTACAAACAGCGGACGAGAGGAAACTTCATTATCTAATAAGACATCCAGGCCAGCATCCGTTTGCTTGTAATGTTTGTGGCAAATCGTTTCAGTATAAGTCTTCCCTATACATGCACAAGCAAGACCACGTACCGAATAAGAAGAGCTACACTTGTACTTATTGCAAGAAAGTGTTTGCGAAGAAGGATTCGTTCCGCGAGCACGTCCAGATACACGAGGGTCCGCGTCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCGAACATGTTGCGTCACGAGCGGCGTCACACCGGCGAGCGGCCCTACGCCTGCCCCAAGTGTCCTCGAACGTTCGCAGACAAGGGCGCCTGTAATTCACATACAAGGACACATTCGAAGGAAACTTCTTATGCTTGTATGTACTGCGGGCAGACATTCGTTCAAAAGTCGAAACTCACGTATCACATAAGAAAACACACTGGAGAAAATCTGGAGAAATGTTCCGTTTGTTCCAAGTTGTTCACGAGTGCATGTTCCTTACGGGAGCACATGAAAGTTCATAATGTCAATAAAGAGATGGTGAAATGCCCATTGTGTGATCGGAAGTATCAAGATGAACGGTACATGCTGCGACATCTTCGGACTTCACATACGCAATCGCATTTCTCTTGTCCGCTCTGCAGCAAAACACTTTCGAGTCCAGCTGGGCTTCGGCATCATGTGTTGACACACAGCGGACAGAAGACTTACACTTGTAAAATCTGCCCTAAAGCCTATTCCGTAAAAAGAACAATACTAAAGCACTTAAGACGGCGTCACAGCCTCAAAGGAACTGAAATCAACATAAAGGATTACTATAATCGGTTAGATCCGAGAGAATGCAATCTCAATCTTGATGAACAGACAATGACTAGCATCTTTGGCGCTCCAAAGAAAGTTATGAACGACGTTCTCGTACGTAACTTTGTTACAGTTACGGAAAACATTAACCTCAGTCAGAAATCAAAAGATGAAGAGGACAATGAGGCGATGAGAAATAAGGTAGATGGTGATGATGATAAACCGGAGAAATCAGGAGAGAGTGAAAAGGAATCAGAGACTGAAGTACAGTTTATACCTGAGAAATTGATCAAGAAAGAGCAGGATAGTGATCATGCTGAAGAAGATTTAGAACCGACCGACTTTGTCAGTGTTAAGATAGAACCGATGGATGATGATCGTGAAGAATTTATTATGTGA
- Protein Sequence
- MTSDESDDEPLSVLAAQKKQNPEMFPDIILPSEIVLEPKKKKKKKFTPSTGAALTIKIQKKFRNVLAPAVIERPADVWLYLKDLNPNGPYSCLLCPDWFINRSKIIVHYVLNHKKDFCGICRYFVSDRGAWWAHMRFHTPWPCSQCIENFVTENALRQHLSSVHNLVHCRLCHFRVSDDDQYNTHLYKKHNVSNVSSKYDEAFWELEYEGCAKFLCLLCSKSSNMSRMFFNHYMGFHHFTLKCFTNLISGTDPPFLVYGADVSSEFVESQLKVQARHGYLDLEKAPDCRETVQQVQIERGTIIEVKEEVFSEDEEARYNAHIGTVKSNELEKYENDNTNIENENEEDEIIKSYKGDEDFDVTLMEIIIFHKGYLEYVNNIMDDINSSLMPKNSYVDYEKYPVDVVTDIYCSLCKSKHGTTNEYSHHMTKMHFVKCIPSFSCRVCSLTFDSLNELDSHISQELSDFDDLWLCQFCDKEFMNREVSRLHLSEHWDLIEYDNCFSPHLGFKCKYCPTLFWNEPDRESHQVRIHFNKYKDEYYKCESCDEFYSDKMWFVHHHVTKHQNSDENLPLYLLKCCLCFFVLSNVEEMRSHFQNSHPEAKKVYCSLDPCKYKPLSQRKSFKIHLKTIHNPSARAAQLVNCTICSREFANMRAISAHMSKVHGPGKFKCKLCKEALQTADERKLHYLIRHPGQHPFACNVCGKSFQYKSSLYMHKQDHVPNKKSYTCTYCKKVFAKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPKCPRTFADKGACNSHTRTHSKETSYACMYCGQTFVQKSKLTYHIRKHTGENLEKCSVCSKLFTSACSLREHMKVHNVNKEMVKCPLCDRKYQDERYMLRHLRTSHTQSHFSCPLCSKTLSSPAGLRHHVLTHSGQKTYTCKICPKAYSVKRTILKHLRRRHSLKGTEINIKDYYNRLDPRECNLNLDEQTMTSIFGAPKKVMNDVLVRNFVTVTENINLSQKSKDEEDNEAMRNKVDGDDDKPEKSGESEKESETEVQFIPEKLIKKEQDSDHAEEDLEPTDFVSVKIEPMDDDREEFIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316662;
- 90% Identity
- iTF_01316662;
- 80% Identity
- -