Basic Information

Gene Symbol
Znf711
Assembly
None
Location
AY:678945-695867[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0012 0.058 13.6 2.8 1 23 213 235 213 236 0.96
2 11 0.0001 0.0049 17.0 1.5 1 23 242 264 242 264 0.97
3 11 0.0083 0.39 11.0 2.8 1 23 268 290 268 290 0.98
4 11 0.056 2.6 8.4 5.4 2 23 295 317 294 317 0.94
5 11 0.0017 0.08 13.2 4.9 1 23 320 343 320 343 0.97
6 11 0.41 19 5.7 2.1 1 19 346 364 346 369 0.81
7 11 0.55 26 5.3 0.1 3 20 378 395 377 397 0.91
8 11 0.00012 0.0054 16.8 0.3 2 23 410 432 409 432 0.94
9 11 1.1e-07 5e-06 26.4 0.9 1 23 438 461 438 461 0.98
10 11 2.1e-05 0.00099 19.2 0.6 3 23 472 492 471 492 0.98
11 11 0.00025 0.012 15.8 0.1 1 23 498 521 498 521 0.97

Sequence Information

Coding Sequence
ATGATGAACGAAATTTCAGTCAAAGAAGAATTTCAGGTGGACAATAAAATAATTTGCCGAACCTGTCTGAGCGTCGGCCGAAAACTCTTTCCACTGGCTGAATTAAAAAATATATTTCAAATACTAACTTCAGAATTTATGTCTCCAGCAAACATTTCTATAGATTTTGCACAATTATGTTGGGAGTGTATTGCAACATTGAAGAAAGTTATACAGTTCCAAATACGTGCAAAAAGAGCTAACGACTTATTAAAGTTTGGTGAGTGCTATTCAAACTCCCTTTCAACTTTAAGTGTTCATAAAATAAATGACAATCAAACTAATGATACAAAAACACAGACAGACATCAAAAGTATTAACGATACATTAGCGAAAGATGAGTTATGCCACTCGGATATAACTCATGAAGATTTTATACCTTCCGATAATGAAAATATCAAGTCGAGCGATAGAGATAAGCAGAAAGGAAAGTATGATAACAGATGGGCGAAGAAAAAAGCTATGCTAAATAAAAGACCTAAGTTCAAAACAGTTCCCAACAGTGAAAGTGTCTTTAGGAGAGTGCGGATTACTGTTAATGAGGTGTTCAGTTATATGGAGAGGGAAAGAGCTAGTAGATTTTACAAGTCTAAATTATACAAGTGTGAGGAATGTGTTATTGGATTTAGTAATGAACATTTGTTATTAAAACATAAAGAGAAGCATCATAATAATGTTGGAGAATATATCTGTGACATTTGCAAAGCAAGATTTACGGTTAAGCGCCATCTATCGAAACATATAGTAAGCCATTTAAATGTTTATGAATGTGGTCTATGTGGGCTTAAATGTCGGAATGAAAAGCAAAAGAGGAAGCATTTGATACGACATAGAAAAATATTGCAATGCCTGAAATGTAGACTCAAGTTCTGTAATAGAAGGGATTTCTTCAAACACTATAAAGAATGGCACGAGAAATTCATATGTGATCACTGTGGGATCAGTTTCAAGATGAGATACTGCATCAAAGATCATTTAAGGAAGCAGCACGCCCCGTTTGAGTGCAAACCGTGTAAGAAAACCTTCAGAAGGTACAACGGTTTATGGTTTCACAACAAACTGAGACACTCTCCTCAGGGTCAACCCGCGTACTGCGTCGAATGCGACAGACACTATGTCGATGTATACAGATATAGATGGCATTTAGCGAACAGCGCTAAACATAAACCGAGGCAGCGGGTCAGTGTTTCGTGTCCGGACTGTGATAAAGTCTTCACAAAGAAGTTATACATGACGGATCATTACAATCTGGTCCATTTGAAGAATTATAAATACCGTTGCGAGGAATGCGATAAGAATTTCACCAGGAATGCGGACCTCGTGAAGCATCGACGTCGCGTCCACGAAGGTATTCCTCTGCCGAAGAATAAGATATGTTTTATTTGCGGTAAAGGATTCACGACAAACAAGATATTGACGAATCATATACGCACTCATACTGGAGAACGTCCGTACGAGTGTGAAGTTTGTTCAGCTCGTTTCGCTCAACGGACTGCTCTCGCATCACATCTCCAATCGGTACATCGGAAGCTGGGAGACTATACAGTGGTCTAA
Protein Sequence
MMNEISVKEEFQVDNKIICRTCLSVGRKLFPLAELKNIFQILTSEFMSPANISIDFAQLCWECIATLKKVIQFQIRAKRANDLLKFGECYSNSLSTLSVHKINDNQTNDTKTQTDIKSINDTLAKDELCHSDITHEDFIPSDNENIKSSDRDKQKGKYDNRWAKKKAMLNKRPKFKTVPNSESVFRRVRITVNEVFSYMERERASRFYKSKLYKCEECVIGFSNEHLLLKHKEKHHNNVGEYICDICKARFTVKRHLSKHIVSHLNVYECGLCGLKCRNEKQKRKHLIRHRKILQCLKCRLKFCNRRDFFKHYKEWHEKFICDHCGISFKMRYCIKDHLRKQHAPFECKPCKKTFRRYNGLWFHNKLRHSPQGQPAYCVECDRHYVDVYRYRWHLANSAKHKPRQRVSVSCPDCDKVFTKKLYMTDHYNLVHLKNYKYRCEECDKNFTRNADLVKHRRRVHEGIPLPKNKICFICGKGFTTNKILTNHIRTHTGERPYECEVCSARFAQRTALASHLQSVHRKLGDYTVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00113537;
90% Identity
iTF_00113537;
80% Identity
-