Basic Information

Insect: Antheraea yamamai
Gene Symbol: -
Assembly: None
Location: AY:116667-117674[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.18 8.7 6.8 0.2 1 23 5 28 5 28 0.88

2 10 0.019 0.91 9.8 0.2 3 23 58 79 57 79 0.92

3 10 0.00023 0.011 15.9 1.1 1 23 101 123 101 123 0.98

4 10 0.00071 0.034 14.3 0.1 1 23 127 149 127 149 0.95

5 10 0.00093 0.044 14.0 0.8 1 23 154 177 154 177 0.95

6 10 0.0008 0.038 14.2 4.6 1 23 183 206 183 206 0.96

7 10 8.3e-05 0.0039 17.3 0.1 1 23 213 236 213 236 0.98

8 10 5.9e-06 0.00028 20.9 0.9 1 23 242 264 242 264 0.96

9 10 1.3e-07 6e-06 26.2 1.3 1 23 270 292 270 292 0.99

10 10 5.2e-05 0.0025 17.9 7.4 1 23 298 320 298 321 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.18	8.7	6.8	0.2	1	23	5	28	5	28	0.88
2	10	0.019	0.91	9.8	0.2	3	23	58	79	57	79	0.92
3	10	0.00023	0.011	15.9	1.1	1	23	101	123	101	123	0.98
4	10	0.00071	0.034	14.3	0.1	1	23	127	149	127	149	0.95
5	10	0.00093	0.044	14.0	0.8	1	23	154	177	154	177	0.95
6	10	0.0008	0.038	14.2	4.6	1	23	183	206	183	206	0.96
7	10	8.3e-05	0.0039	17.3	0.1	1	23	213	236	213	236	0.98
8	10	5.9e-06	0.00028	20.9	0.9	1	23	242	264	242	264	0.96
9	10	1.3e-07	6e-06	26.2	1.3	1	23	270	292	270	292	0.99
10	10	5.2e-05	0.0025	17.9	7.4	1	23	298	320	298	321	0.96

Sequence Information

Coding Sequence: ATGAAGAATACGTATATTTGCATCTATTGTCAACGGTATTTCAACGATCCCATAGAAATGAGACAGCATAACGCGTCCGAACACGAGAGATTGACTCAAACCGACATTAAAATTGCAATATCGAAACTGAAAAAATACGAGCTGGTCAAAGTTGACGTGACAAATGTTGATTGTAGAATCTGTAATAAAAGTATTAAAATGTATAAAGAGCTTAAAATTCATCTCGCTGAAGAGCACGGAAAGAATATAGACCCGAACGCGACAGACGGTGTCTTGCCTTTCAAAGTGACGCCATCGCATTACAGCTGCGGCATCTGTAGTGAGAGCTACGAAGAATTCAAGAGCCTGAACCATCACATGAACGTGCATTTCCAGAACTTTATCTGCGATCAGTGTGGAATAGGATTCATTACGCCGGGACGGTTGCGGACACACGCGTTCTCGCACGAGACTGGGTCGCATCCGTGCGACAGTTGCGATAAAGTTTTCCGTTCCTCAAACGCAAAGAACGAACACTACGCGACGGTACATTTGAAAGTCAAAAGGCATAGATGTCCGCATTGCACTGAAACCTTTAGGAACTATTTCCAAAGAAACAAACACATCGCATCGGTACACGGCTTGAAACTTAAGGAATTCAAATGTGCGATGTGTCCAAAAGTGTTTAATTTGAGCGGAAAATTGGGTGTGCACGTGCGTACGGTGCATTTGAAGGTGAAGCGGCACGCTTGCGAGGTTTGCGAGTGGAAATTTTATTCCAAGTCGGAGTTAAAGGACCATATGATCCGACACGGCGGCGAGAGGAAGTTCCAATGTAACGTATGCAAGAAAGCTTATGCTCGGAAGTATACACTAAGGGAGCATATGAGGATACATGAGAACGATAGACGATTTGTGTGTAGTACATGTGGGAGGTCCTTTGTTCAGAATTGTAGTTTGAAGCATCATACGAAGATTCATCACCCGGTTGATGCGCAGACGATGAAGATGACCTCGTTTGTGAAGTGA
Protein Sequence: MKNTYICIYCQRYFNDPIEMRQHNASEHERLTQTDIKIAISKLKKYELVKVDVTNVDCRICNKSIKMYKELKIHLAEEHGKNIDPNATDGVLPFKVTPSHYSCGICSESYEEFKSLNHHMNVHFQNFICDQCGIGFITPGRLRTHAFSHETGSHPCDSCDKVFRSSNAKNEHYATVHLKVKRHRCPHCTETFRNYFQRNKHIASVHGLKLKEFKCAMCPKVFNLSGKLGVHVRTVHLKVKRHACEVCEWKFYSKSELKDHMIRHGGERKFQCNVCKKAYARKYTLREHMRIHENDRRFVCSTCGRSFVQNCSLKHHTKIHHPVDAQTMKMTSFVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00112733;
90% Identity: iTF_00112733;
80% Identity: -