Basic Information

Insect: Antheraea yamamai
Gene Symbol: -
Assembly: None
Location: AY:662623-667524[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.027 1.3 9.4 4.6 1 23 8 31 8 31 0.95

2 18 0.0056 0.26 11.5 0.5 2 23 67 89 67 89 0.94

3 18 2.4e-05 0.0012 19.0 2.8 1 23 95 117 95 117 0.97

4 18 7.6 3.6e+02 1.7 0.6 1 7 123 129 123 133 0.89

5 18 0.014 0.67 10.3 0.5 1 23 147 170 147 170 0.94

6 18 0.063 3 8.2 6.0 2 23 177 199 176 199 0.96

7 18 0.00014 0.0066 16.6 0.9 1 23 207 230 207 230 0.95

8 18 0.96 45 4.5 1.0 2 17 234 249 234 250 0.92

9 18 0.0021 0.097 12.9 0.1 2 23 261 283 261 283 0.96

10 18 4.1e-06 0.00019 21.4 2.0 3 23 291 311 290 311 0.98

11 18 0.0022 0.1 12.8 5.5 1 23 317 339 317 339 0.96

12 18 0.028 1.3 9.3 0.4 1 23 345 368 345 368 0.96

13 18 0.0028 0.13 12.5 0.4 1 23 394 417 394 417 0.95

14 18 0.0011 0.053 13.7 2.2 1 23 454 477 454 477 0.96

15 18 0.0036 0.17 12.1 3.2 2 23 481 502 480 502 0.93

16 18 0.036 1.7 9.0 0.2 3 23 538 558 537 558 0.94

17 18 0.00028 0.013 15.6 3.1 1 23 564 586 564 586 0.98

18 18 6.6e-06 0.00031 20.8 1.1 3 23 594 614 593 615 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.027	1.3	9.4	4.6	1	23	8	31	8	31	0.95
2	18	0.0056	0.26	11.5	0.5	2	23	67	89	67	89	0.94
3	18	2.4e-05	0.0012	19.0	2.8	1	23	95	117	95	117	0.97
4	18	7.6	3.6e+02	1.7	0.6	1	7	123	129	123	133	0.89
5	18	0.014	0.67	10.3	0.5	1	23	147	170	147	170	0.94
6	18	0.063	3	8.2	6.0	2	23	177	199	176	199	0.96
7	18	0.00014	0.0066	16.6	0.9	1	23	207	230	207	230	0.95
8	18	0.96	45	4.5	1.0	2	17	234	249	234	250	0.92
9	18	0.0021	0.097	12.9	0.1	2	23	261	283	261	283	0.96
10	18	4.1e-06	0.00019	21.4	2.0	3	23	291	311	290	311	0.98
11	18	0.0022	0.1	12.8	5.5	1	23	317	339	317	339	0.96
12	18	0.028	1.3	9.3	0.4	1	23	345	368	345	368	0.96
13	18	0.0028	0.13	12.5	0.4	1	23	394	417	394	417	0.95
14	18	0.0011	0.053	13.7	2.2	1	23	454	477	454	477	0.96
15	18	0.0036	0.17	12.1	3.2	2	23	481	502	480	502	0.93
16	18	0.036	1.7	9.0	0.2	3	23	538	558	537	558	0.94
17	18	0.00028	0.013	15.6	3.1	1	23	564	586	564	586	0.98
18	18	6.6e-06	0.00031	20.8	1.1	3	23	594	614	593	615	0.95

Sequence Information

Coding Sequence: ATGATCGAAGGATCGAAAAACTACACTTGCAACATATGCAAACGTGTTTACAAGAGCTTGCCGTGCGTAAAACAGCATTACCAACACGTTCATCTAAAACTGAGGCCGAAGTTACGCGGTTGCTACTTATGTGACATTAAAGTGCCAGCTTACTTGAGAGCCGCTCATTTGGAGGAAGCTCACGGAATAGCGGCACCGACCTGCGGCGCTTGCGGCAAGAAGTTCGGCTATCCCAACCAGGTGTTACGTCACCAGAAAAACTTCCACATGGGCGAGAAACGGTTCAGATGTCGCCACTGCGATATGATGTTCTCGTCCCGAGCGAATTTAACGCAACACGAAATCAAACACTCGGAAGAGAGGGGCCATAAATGTGAATATTGCGGTGGAACAAGCGTCGAGGACTACCTAACTATTGGCACAAATCCGAGAAGACAGCACTCTTGCAAAGCTTGCGAGGTCTCTTACTCCCGTATATCAGACCTCCGCTACCACGTCGCAAGAGCGCATCTAAAACAGAAGTTCATCAAATGCCACAAATGCTCAGAAACATTTATGTATCACAGCCAAAGGAAGATTCACATGTATCGCTCACATTCAATGGGCATACCCGAGAAGTTCCAATGTGAATACTGCTCAAGGCAGTTCCAGAGGAAGAATACGCTAGTAGAGCACATGCTTGACGTACACATCGAGAGAAAATGTGGATACTGCGAGTCGAGATTCGTTAGGAAAAAATATCTTTTCCATCTGAACGAGAAACATGGAGTACCGATACCAACTTGTGGGATTTGTGGTTTGAGAACTATTTTGGAGAGCTCATTGATACGTCACCAGAGGAACGTGCATTTGAGAGAGAGGACAAAAGCTTGCACAATATGCTCGAAAACGTTCCACACCGAGTCTAACCTTAAGGACCATATGATAACTCACCGTCAAGAGAGGGTGTTTAGATGTGACGTTTGTGGGAAGGATTTCGCGAGGAAGGAATGTTATAGGACTCACTGTAGGATCCATACTGGTGAAAAACCGTTCATTTGTCGGTTCTGTGGCATCGCTTATATACAGAGAGCTAGCTTGAGATTCCACGTGAGGAGTCGCCATGGAGGCAAGAAAAACACCACAATCCATGATTACCACGAATGCTTCAAGATAGTCGGAAACGGTGAAAACAAGGAATACGTATGTCGTTACTGTGGTTTAGAATGTACAGATGCGGAAGGTATGACGTCACACATCAATGACAAACACAATTCTAAGTACAAGGAACGCCTCACTAGCAACGATAGTATCGTCAAAGTACACGACTTCATTGAAGTCGGTCCAAGATTCAATGTACGACTGGACAAGGTGCTCAGTTACGTCTGTCACGTTTGTTCCAAGGAGTACCCGAACGAGAACTCATTGAAACTCCACAAAAAGAATTATCACATTCTAAAGAAATGCCCCGATTGTGACTTGAAATTCACTAGACGGAACCTCCGCATGCATCAGCACGAATCCCACGGTGTTCAGATACCGACCTGCGGTGTCTGCGGTTACAAGAACTGGGTCACGGCTAAGGTTATCGTGCACCAGAGAAAGGTCCATATGAACGAAAAGAACGTGGCCTGCGACCAATGCGACATGAAGTTCTTCGACCGTATCAGCCTTGGAAGACATAAGATTGCCCACGGGACCGATAGGAAATTCGAATGTTCCTACTGTCATAAGAAGTATCCAAGGTTGAACACTTTGAGGCTGCACGAGAAAATACACACCAAAGTTAAGGACAAGATATGTTCTATCTGTGGACAAGGATTCGTGCAAAAAGCTAGTCTAAATTATCATATGAAGAAACATCATCCTGAATCATGTTGA
Protein Sequence: MIEGSKNYTCNICKRVYKSLPCVKQHYQHVHLKLRPKLRGCYLCDIKVPAYLRAAHLEEAHGIAAPTCGACGKKFGYPNQVLRHQKNFHMGEKRFRCRHCDMMFSSRANLTQHEIKHSEERGHKCEYCGGTSVEDYLTIGTNPRRQHSCKACEVSYSRISDLRYHVARAHLKQKFIKCHKCSETFMYHSQRKIHMYRSHSMGIPEKFQCEYCSRQFQRKNTLVEHMLDVHIERKCGYCESRFVRKKYLFHLNEKHGVPIPTCGICGLRTILESSLIRHQRNVHLRERTKACTICSKTFHTESNLKDHMITHRQERVFRCDVCGKDFARKECYRTHCRIHTGEKPFICRFCGIAYIQRASLRFHVRSRHGGKKNTTIHDYHECFKIVGNGENKEYVCRYCGLECTDAEGMTSHINDKHNSKYKERLTSNDSIVKVHDFIEVGPRFNVRLDKVLSYVCHVCSKEYPNENSLKLHKKNYHILKKCPDCDLKFTRRNLRMHQHESHGVQIPTCGVCGYKNWVTAKVIVHQRKVHMNEKNVACDQCDMKFFDRISLGRHKIAHGTDRKFECSYCHKKYPRLNTLRLHEKIHTKVKDKICSICGQGFVQKASLNYHMKKHHPESC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -